RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 TMED3Q9Y3Q3 217 aa8.27□□□□□ -1.09
DDB1-202ENST00000414411 ZANQ9Y493 2812 aa8.27□□□□□ -1.09
DDB1-202ENST00000414411 PPIAL4EA0A075B759 164 aa8.26□□□□□ -1.09
DDB1-202ENST00000414411 C3orf85A0A1B0GTC6 90 aa8.26□□□□□ -1.09
DDB1-202ENST00000414411 TMEM218A2RU14 115 aa8.26□□□□□ -1.09
DDB1-202ENST00000414411 TRDCB7Z8K6 153 aa8.26□□□□□ -1.09
DDB1-202ENST00000414411 PPIAL4DF5H284 164 aa8.26□□□□□ -1.09
DDB1-202ENST00000414411 TUSC2O75896 110 aa8.26□□□□□ -1.09
DDB1-202ENST00000414411 JTBO76095 146 aa8.26□□□□□ -1.09
DDB1-202ENST00000414411 IGHV2-70P01814 119 aa8.26□□□□□ -1.09
DDB1-202ENST00000414411 PPIAL4FP0DN26 164 aa8.26□□□□□ -1.09
DDB1-202ENST00000414411 RND3P61587 244 aa8.26□□□□□ -1.09
DDB1-202ENST00000414411 ZNF273Q14593 569 aa8.26□□□□□ -1.09
DDB1-202ENST00000414411 PXDC1Q5TGL8 231 aa8.26□□□□□ -1.09
DDB1-202ENST00000414411 IL34Q6ZMJ4 242 aa8.26□□□□□ -1.09
DDB1-202ENST00000414411 SLC35G3Q8N808 338 aa8.26□□□□□ -1.09
DDB1-202ENST00000414411 SUMF2Q8NBJ7 301 aa8.26□□□□□ -1.09
DDB1-202ENST00000414411 OR52M1Q8NGK5 317 aa8.26□□□□□ -1.09
DDB1-202ENST00000414411 OR4A4PQ8NGN8 299 aa8.26□□□□□ -1.09
DDB1-202ENST00000414411 TMEM222Q9H0R3 208 aa8.26□□□□□ -1.09
DDB1-202ENST00000414411 RIMS4Q9H426 269 aaPredicted RBP8.26□□□□□ -1.09
DDB1-202ENST00000414411 PPIAL4AQ9Y536 164 aa8.26□□□□□ -1.09
DDB1-202ENST00000414411 MALRD1Q5VYJ5 2156 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 IGKV1D-17A0A075B6S4 117 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 TRBV6-6A0A0A6YYG2 114 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 TRAV24A0A0B4J272 114 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 IGKV1-6A0A0C4DH72 117 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 OOEPA6NGQ2 149 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 TSPAN4O14817 238 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 CTXN2P0C2S0 81 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 PSG2P11465 335 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 CD80P33681 288 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 SULT1A2P50226 295 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 DEFA5Q01523 94 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 SMIM21Q3B7S5 101 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 C5orf24Q7Z6I8 188 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 TBC1D26Q86UD7 250 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 OR4D5Q8NGN0 318 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 MRPL30Q8TCC3 161 aaKnown RBP8.25□□□□□ -1.09
DDB1-202ENST00000414411 C10orf105Q8TEF2 133 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 SECTM1Q8WVN6 248 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 WIPI2Q9Y4P8 454 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 OTOGQ6ZRI0 2925 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 CREBBPQ92793 2442 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 IGHV3OR15-7A0A075B7D8 119 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 TRAV38-1A0A0B4J264 116 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 IGKV1D-13A0A0B4J2D9 117 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 VWC2LB2RUY7 222 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 NDUFS8O00217 210 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 GPR31O00270 319 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 ST8SIA3O43173 380 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 PPIHO43447 177 aaKnown RBP8.25□□□□□ -1.09
DDB1-202ENST00000414411 ATG12O94817 140 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 CDS2O95674 445 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 GLAP06280 429 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 IGKV1-13P0DP09 117 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 ADCYAP1P18509 176 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 LPAR6P43657 344 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 PDLIM4P50479 330 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 AKR1C2P52895 323 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 DSCR9P59020 149 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 AKR1C1Q04828 323 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 PJVKQ0ZLH3 352 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 SPIN3Q5JUX0 258 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 STUMQ69YW2 141 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 Q6P435 159 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 PRSS57Q6UWY2 283 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 ZNF818PQ6ZRF7 136 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 KRTAP1-3Q8IUG1 177 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 CD177Q8N6Q3 437 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 ZNF565Q8N9K5 539 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 UBAC2Q8NBM4 344 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 DEFB108BQ8NET1 73 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 FAM168AQ92567 244 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 RAB1CQ92928 201 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 TMEM56Q96MV1 263 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 SMIM3Q9BZL3 60 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 POMT1Q9Y6A1 747 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 TMEM56-RWDD3S4R434 201 aa8.25□□□□□ -1.09
DDB1-202ENST00000414411 ZNF469Q96JG9 3925 aaPredicted RBP8.24□□□□□ -1.09
DDB1-202ENST00000414411 GPR137BO60478 399 aa8.24□□□□□ -1.09
DDB1-202ENST00000414411 MED6O75586 246 aa8.24□□□□□ -1.09
DDB1-202ENST00000414411 S100A6P06703 90 aa8.24□□□□□ -1.09
DDB1-202ENST00000414411 LMO1P25800 156 aa8.24□□□□□ -1.09
DDB1-202ENST00000414411 MDH2P40926 338 aaKnown RBP8.24□□□□□ -1.09
DDB1-202ENST00000414411 P2RY1P47900 373 aa8.24□□□□□ -1.09
DDB1-202ENST00000414411 SRSF3P84103 164 aaKnown RBP8.24□□□□□ -1.09
DDB1-202ENST00000414411 TMEM155Q4W5P6 130 aa8.24□□□□□ -1.09
DDB1-202ENST00000414411 GPR157Q5UAW9 335 aa8.24□□□□□ -1.09
DDB1-202ENST00000414411 ZNF880Q6PDB4 577 aa8.24□□□□□ -1.09
DDB1-202ENST00000414411 GAPTQ8N292 157 aa8.24□□□□□ -1.09
DDB1-202ENST00000414411 SDSLQ96GA7 329 aa8.24□□□□□ -1.09
DDB1-202ENST00000414411 TIMD4Q96H15 378 aa8.24□□□□□ -1.09
DDB1-202ENST00000414411 NKX6-2Q9C056 277 aaPredicted RBP8.24□□□□□ -1.09
DDB1-202ENST00000414411 ARV1Q9H2C2 271 aa8.24□□□□□ -1.09
DDB1-202ENST00000414411 RCL1Q9Y2P8 373 aaKnown RBP8.24□□□□□ -1.09
DDB1-202ENST00000414411 UBE2J1Q9Y385 318 aaPredicted RBP8.24□□□□□ -1.09
DDB1-202ENST00000414411 CELSR1Q9NYQ6 3014 aa8.24□□□□□ -1.09
DDB1-202ENST00000414411 NDUFA2O43678 99 aa8.23□□□□□ -1.09
DDB1-202ENST00000414411 TFF1P04155 84 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms