RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 GABRA6Q16445 453 aa11.04□□□□□ -0.64
LITAF-203ENST00000413364 MORN2Q502X0 79 aa11.04□□□□□ -0.64
LITAF-203ENST00000413364 C9orf106Q8NAJ2 232 aa11.04□□□□□ -0.64
LITAF-203ENST00000413364 TOMM40LQ969M1 308 aa11.04□□□□□ -0.64
LITAF-203ENST00000413364 LIME1Q9H400 295 aa11.04□□□□□ -0.64
LITAF-203ENST00000413364 RNF150Q9ULK6 438 aa11.04□□□□□ -0.64
LITAF-203ENST00000413364 ZNF705FA8MVS1 300 aaPredicted RBP11.04□□□□□ -0.64
LITAF-203ENST00000413364 LYZL6O75951 148 aa11.04□□□□□ -0.64
LITAF-203ENST00000413364 CELA3BP08861 270 aa11.04□□□□□ -0.64
LITAF-203ENST00000413364 OR5G3P0C626 314 aa11.04□□□□□ -0.64
LITAF-203ENST00000413364 ZNF705DP0CH99 300 aaPredicted RBP11.04□□□□□ -0.64
LITAF-203ENST00000413364 ZNF705BP0CI00 300 aaPredicted RBP11.04□□□□□ -0.64
LITAF-203ENST00000413364 PTGER4P35408 488 aa11.04□□□□□ -0.64
LITAF-203ENST00000413364 GNG3P63215 75 aa11.04□□□□□ -0.64
LITAF-203ENST00000413364 COL10A1Q03692 680 aa11.04□□□□□ -0.64
LITAF-203ENST00000413364 INO80CQ6PI98 192 aaPredicted RBP11.04□□□□□ -0.64
LITAF-203ENST00000413364 CNEP1R1Q8N9A8 125 aa11.04□□□□□ -0.64
LITAF-203ENST00000413364 OR8G5Q8NG78 346 aa11.04□□□□□ -0.64
LITAF-203ENST00000413364 CIB3Q96Q77 187 aaPredicted RBP11.04□□□□□ -0.64
LITAF-203ENST00000413364 PRR13Q9NZ81 148 aa11.04□□□□□ -0.64
LITAF-203ENST00000413364 TRAV30A0A087WSZ9 112 aa11.03□□□□□ -0.64
LITAF-203ENST00000413364 RBFOX3A6NFN3 312 aa11.03□□□□□ -0.64
LITAF-203ENST00000413364 SYNGR1O43759 233 aa11.03□□□□□ -0.64
LITAF-203ENST00000413364 NDUFB8O95169 186 aa11.03□□□□□ -0.64
LITAF-203ENST00000413364 BMP5P22003 454 aa11.03□□□□□ -0.64
LITAF-203ENST00000413364 MPV17LQ2QL34 196 aa11.03□□□□□ -0.64
LITAF-203ENST00000413364 ACSF3Q4G176 576 aaPredicted RBP11.03□□□□□ -0.64
LITAF-203ENST00000413364 FBLN7Q53RD9 439 aa11.03□□□□□ -0.64
LITAF-203ENST00000413364 SPATA46Q5T0L3 261 aa11.03□□□□□ -0.64
LITAF-203ENST00000413364 IGFL3Q6UXB1 125 aa11.03□□□□□ -0.64
LITAF-203ENST00000413364 Q6ZPA2 131 aa11.03□□□□□ -0.64
LITAF-203ENST00000413364 HS3ST6Q96QI5 342 aa11.03□□□□□ -0.64
LITAF-203ENST00000413364 TAAR6Q96RI8 345 aa11.03□□□□□ -0.64
LITAF-203ENST00000413364 TBX15Q96SF7 602 aa11.03□□□□□ -0.64
LITAF-203ENST00000413364 A0A1W2PR80 420 aa11.02□□□□□ -0.64
LITAF-203ENST00000413364 PRH1P02810 166 aa11.02□□□□□ -0.64
LITAF-203ENST00000413364 PPP1CBP62140 327 aa11.02□□□□□ -0.64
LITAF-203ENST00000413364 COX11Q9Y6N1 276 aa11.02□□□□□ -0.64
LITAF-203ENST00000413364 DOCK7Q96N67 2140 aa11.02□□□□□ -0.64
LITAF-203ENST00000413364 BORCS7-ASMTA0A0B4J1R7 106 aa11.02□□□□□ -0.65
LITAF-203ENST00000413364 CRYM-AS1A6NIL9 109 aa11.02□□□□□ -0.65
LITAF-203ENST00000413364 RNF212BA8MTL3 300 aa11.02□□□□□ -0.65
LITAF-203ENST00000413364 ZNF728P0DKX0 622 aa11.02□□□□□ -0.65
LITAF-203ENST00000413364 COX5AP20674 150 aa11.02□□□□□ -0.65
LITAF-203ENST00000413364 CA6P23280 308 aa11.02□□□□□ -0.65
LITAF-203ENST00000413364 RBMXP38159 391 aaKnown RBP11.02□□□□□ -0.65
LITAF-203ENST00000413364 HLA-DRB3P79483 266 aa11.02□□□□□ -0.65
LITAF-203ENST00000413364 IL24Q13007 206 aa11.02□□□□□ -0.65
LITAF-203ENST00000413364 ACOT6Q3I5F7 207 aaPredicted RBP11.02□□□□□ -0.65
LITAF-203ENST00000413364 Q6ZS49 121 aa11.02□□□□□ -0.65
LITAF-203ENST00000413364 TGIF2LYQ8IUE0 185 aa11.02□□□□□ -0.65
LITAF-203ENST00000413364 SGPP2Q8IWX5 399 aa11.02□□□□□ -0.65
LITAF-203ENST00000413364 ZCCHC14Q8WYQ9 949 aaKnown RBP11.02□□□□□ -0.65
LITAF-203ENST00000413364 CABLES2Q9BTV7 478 aa11.02□□□□□ -0.65
LITAF-203ENST00000413364 PKIBQ9C010 78 aa11.02□□□□□ -0.65
LITAF-203ENST00000413364 CTDSP1Q9GZU7 261 aa11.02□□□□□ -0.65
LITAF-203ENST00000413364 OR51I2Q9H344 312 aa11.02□□□□□ -0.65
LITAF-203ENST00000413364 PLK3Q9H4B4 646 aa11.02□□□□□ -0.65
LITAF-203ENST00000413364 CST9LQ9H4G1 147 aa11.02□□□□□ -0.65
LITAF-203ENST00000413364 URB1O60287 2271 aaKnown RBP11.02□□□□□ -0.65
LITAF-203ENST00000413364 ZNF292O60281 2723 aa11.01□□□□□ -0.65
LITAF-203ENST00000413364 M0QZ24 198 aa11.01□□□□□ -0.65
LITAF-203ENST00000413364 HSPB1P04792 205 aaKnown RBP11.01□□□□□ -0.65
LITAF-203ENST00000413364 FCGR2CP31995 323 aa11.01□□□□□ -0.65
LITAF-203ENST00000413364 SRSF7Q16629 238 aaKnown RBP eCLIP11.01□□□□□ -0.65
LITAF-203ENST00000413364 TEX43Q6ZNM6 134 aa11.01□□□□□ -0.65
LITAF-203ENST00000413364 LINC00596Q86U02 117 aa11.01□□□□□ -0.65
LITAF-203ENST00000413364 C1orf162Q8NEQ5 155 aaPredicted RBP11.01□□□□□ -0.65
LITAF-203ENST00000413364 C2orf50Q96LR7 162 aa11.01□□□□□ -0.65
LITAF-203ENST00000413364 TMEM56Q96MV1 263 aa11.01□□□□□ -0.65
LITAF-203ENST00000413364 IMMP2LQ96T52 175 aa11.01□□□□□ -0.65
LITAF-203ENST00000413364 IL36RNQ9UBH0 155 aa11.01□□□□□ -0.65
LITAF-203ENST00000413364 TMEM56-RWDD3S4R434 201 aa11.01□□□□□ -0.65
LITAF-203ENST00000413364 NAPSAO96009 420 aa11.01□□□□□ -0.65
LITAF-203ENST00000413364 RPL12P30050 165 aaKnown RBP11.01□□□□□ -0.65
LITAF-203ENST00000413364 FHITP49789 147 aa11.01□□□□□ -0.65
LITAF-203ENST00000413364 PLSCR4Q9NRQ2 329 aa11.01□□□□□ -0.65
LITAF-203ENST00000413364 C1orf123Q9NWV4 160 aa11.01□□□□□ -0.65
LITAF-203ENST00000413364 FBXL17Q9UF56 701 aa11.01□□□□□ -0.65
LITAF-203ENST00000413364 IGHV2OR16-5A0A0B4J2B6 119 aa11□□□□□ -0.65
LITAF-203ENST00000413364 H0YL77 283 aa11□□□□□ -0.65
LITAF-203ENST00000413364 J3QT63 122 aa11□□□□□ -0.65
LITAF-203ENST00000413364 ZNF205O95201 554 aa11□□□□□ -0.65
LITAF-203ENST00000413364 SRP19P09132 144 aaKnown RBP11□□□□□ -0.65
LITAF-203ENST00000413364 UCP3P55916 312 aa11□□□□□ -0.65
LITAF-203ENST00000413364 SMIM21Q3B7S5 101 aa11□□□□□ -0.65
LITAF-203ENST00000413364 CMTM1Q8IZ96 169 aa11□□□□□ -0.65
LITAF-203ENST00000413364 WDR31Q8NA23 367 aa11□□□□□ -0.65
LITAF-203ENST00000413364 POC1AQ8NBT0 407 aa11□□□□□ -0.65
LITAF-203ENST00000413364 TMEM170AQ8WVE7 144 aa11□□□□□ -0.65
LITAF-203ENST00000413364 LRFN3Q9BTN0 628 aa11□□□□□ -0.65
LITAF-203ENST00000413364 RTL8AQ9BWD3 113 aa11□□□□□ -0.65
LITAF-203ENST00000413364 PARP12Q9H0J9 701 aaKnown RBP11□□□□□ -0.65
LITAF-203ENST00000413364 Q9N2K0 584 aa11□□□□□ -0.65
LITAF-203ENST00000413364 MMP23AO75900 390 aa11□□□□□ -0.65
LITAF-203ENST00000413364 PIGPP57054 158 aa11□□□□□ -0.65
LITAF-203ENST00000413364 FXYD4P59646 89 aa11□□□□□ -0.65
LITAF-203ENST00000413364 FOXF2Q12947 444 aa11□□□□□ -0.65
LITAF-203ENST00000413364 IL13RA2Q14627 380 aa11□□□□□ -0.65
LITAF-203ENST00000413364 LDLRAD2Q5SZI1 272 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms