RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 FSCN3Q9NQT6 498 aa14.85□□□□□ -0.03
SDCBP-202ENST00000413219 SDK1Q7Z5N4 2213 aa14.84□□□□□ -0.03
SDCBP-202ENST00000413219 C17orf112F2Z3M2 114 aa14.84□□□□□ -0.03
SDCBP-202ENST00000413219 SIRPB1O00241 398 aa14.84□□□□□ -0.03
SDCBP-202ENST00000413219 TMPRSS2O15393 492 aa14.84□□□□□ -0.03
SDCBP-202ENST00000413219 CA6P23280 308 aa14.84□□□□□ -0.03
SDCBP-202ENST00000413219 OTX2P32243 289 aa14.84□□□□□ -0.03
SDCBP-202ENST00000413219 CLDN18P56856 261 aa14.84□□□□□ -0.03
SDCBP-202ENST00000413219 PAX5Q02548 391 aa14.84□□□□□ -0.03
SDCBP-202ENST00000413219 HNF4GQ14541 408 aa14.84□□□□□ -0.03
SDCBP-202ENST00000413219 TGIF2LXQ8IUE1 241 aa14.84□□□□□ -0.03
SDCBP-202ENST00000413219 MRPL41Q8IXM3 137 aaKnown RBP14.84□□□□□ -0.03
SDCBP-202ENST00000413219 DIRC2Q96SL1 478 aa14.84□□□□□ -0.03
SDCBP-202ENST00000413219 NPCDR1Q9BY65 106 aa14.84□□□□□ -0.03
SDCBP-202ENST00000413219 POLDIP2Q9Y2S7 368 aa14.84□□□□□ -0.03
SDCBP-202ENST00000413219 CNTRLQ7Z7A1 2325 aa14.84□□□□□ -0.03
SDCBP-202ENST00000413219 TRIOO75962 3097 aa14.84□□□□□ -0.03
SDCBP-202ENST00000413219 TCAPO15273 167 aa14.83□□□□□ -0.03
SDCBP-202ENST00000413219 PDE6DO43924 150 aa14.83□□□□□ -0.03
SDCBP-202ENST00000413219 IGFBP4P22692 258 aa14.83□□□□□ -0.03
SDCBP-202ENST00000413219 TCTEX1D1Q8N7M0 179 aa14.83□□□□□ -0.03
SDCBP-202ENST00000413219 CEP290O15078 2479 aa14.83□□□□□ -0.04
SDCBP-202ENST00000413219 ODAMA1E959 279 aa14.83□□□□□ -0.04
SDCBP-202ENST00000413219 C11orf94C9JXX5 98 aa14.83□□□□□ -0.04
SDCBP-202ENST00000413219 SOX15O60248 233 aa14.83□□□□□ -0.04
SDCBP-202ENST00000413219 RPL15P61313 204 aaKnown RBP14.83□□□□□ -0.04
SDCBP-202ENST00000413219 CATR1Q13166 79 aa14.83□□□□□ -0.04
SDCBP-202ENST00000413219 EIF4EBP1Q13541 118 aaPredicted RBP14.83□□□□□ -0.04
SDCBP-202ENST00000413219 ZNF146Q15072 292 aa14.83□□□□□ -0.04
SDCBP-202ENST00000413219 TMEM144Q7Z5S9 345 aa14.83□□□□□ -0.04
SDCBP-202ENST00000413219 DTD1Q8TEA8 209 aa14.83□□□□□ -0.04
SDCBP-202ENST00000413219 CLN8Q9UBY8 286 aa14.83□□□□□ -0.04
SDCBP-202ENST00000413219 PILRBQ9UKJ0 227 aa14.83□□□□□ -0.04
SDCBP-202ENST00000413219 SH2D1BO14796 132 aa14.82□□□□□ -0.04
SDCBP-202ENST00000413219 IL3RAP26951 378 aa14.82□□□□□ -0.04
SDCBP-202ENST00000413219 DUSP3P51452 185 aaPredicted RBP14.82□□□□□ -0.04
SDCBP-202ENST00000413219 SRYQ05066 204 aa14.82□□□□□ -0.04
SDCBP-202ENST00000413219 TFF3Q07654 80 aa14.82□□□□□ -0.04
SDCBP-202ENST00000413219 CLEC12BQ2HXU8 276 aa14.82□□□□□ -0.04
SDCBP-202ENST00000413219 FAM173AQ9BQD7 235 aa14.82□□□□□ -0.04
SDCBP-202ENST00000413219 ZNF703Q9H7S9 590 aaPredicted RBP14.82□□□□□ -0.04
SDCBP-202ENST00000413219 C3orf80F5H4A9 247 aa14.81□□□□□ -0.04
SDCBP-202ENST00000413219 RAB29O14966 203 aa14.81□□□□□ -0.04
SDCBP-202ENST00000413219 NPPCP23582 126 aa14.81□□□□□ -0.04
SDCBP-202ENST00000413219 G6PCP35575 357 aa14.81□□□□□ -0.04
SDCBP-202ENST00000413219 CDC34P49427 236 aaPredicted RBP14.81□□□□□ -0.04
SDCBP-202ENST00000413219 PPP1CBP62140 327 aa14.81□□□□□ -0.04
SDCBP-202ENST00000413219 GNB2P62879 340 aa14.81□□□□□ -0.04
SDCBP-202ENST00000413219 FOXL1Q12952 345 aa14.81□□□□□ -0.04
SDCBP-202ENST00000413219 NUFIP2Q7Z417 695 aaKnown RBP14.81□□□□□ -0.04
SDCBP-202ENST00000413219 LINC01551Q86U37 167 aa14.81□□□□□ -0.04
SDCBP-202ENST00000413219 KCNIP1Q9NZI2 227 aa14.81□□□□□ -0.04
SDCBP-202ENST00000413219 B4GALT7Q9UBV7 327 aa14.81□□□□□ -0.04
SDCBP-202ENST00000413219 RAMP3O60896 148 aa14.81□□□□□ -0.04
SDCBP-202ENST00000413219 CLDN14O95500 239 aa14.81□□□□□ -0.04
SDCBP-202ENST00000413219 KRASP01116 189 aa14.81□□□□□ -0.04
SDCBP-202ENST00000413219 ERVFC1-1P60608 527 aa14.81□□□□□ -0.04
SDCBP-202ENST00000413219 TLE1Q04724 770 aa14.81□□□□□ -0.04
SDCBP-202ENST00000413219 OR2M7Q8NG81 312 aa14.81□□□□□ -0.04
SDCBP-202ENST00000413219 RAB1CQ92928 201 aa14.81□□□□□ -0.04
SDCBP-202ENST00000413219 WDYHV1Q96HA8 205 aa14.81□□□□□ -0.04
SDCBP-202ENST00000413219 F6UZH7 168 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 J3QW42 95 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 EREGO14944 169 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 PDGFBP01127 241 aaPredicted RBP14.8□□□□□ -0.04
SDCBP-202ENST00000413219 OR4A8P0C604 315 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 RAC2P15153 192 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 SPINK2P20155 84 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 PMP22Q01453 160 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 SSPNQ14714 243 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 KIAA2026Q5HYC2 2103 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 C1orf194Q5T5A4 169 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 FAM78BQ5VT40 261 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 SCCPDHQ8NBX0 429 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 UBALD1Q8TB05 177 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 CHODLQ9H9P2 273 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 GP6Q9HCN6 339 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 KCNIP2Q9NS61 270 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 FKBP11Q9NYL4 201 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 PXMP4Q9Y6I8 212 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 KIR2DL5BA0A0G2JN68 375 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 KIR2DL5BA0A0G2JPC4 375 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 ZG16O60844 167 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 CHRNA7P36544 502 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 RPL30P62888 115 aaKnown RBP14.8□□□□□ -0.04
SDCBP-202ENST00000413219 PMS2CLQ68D20 193 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 WDR86Q86TI4 376 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 KIR2DL5AQ8N109 375 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 TXNDC17Q9BRA2 123 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 OR2D2Q9H210 308 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 WASF3Q9UPY6 502 aa14.8□□□□□ -0.04
SDCBP-202ENST00000413219 TMEM30CPA0ZSE6 113 aa14.79□□□□□ -0.04
SDCBP-202ENST00000413219 C1QTNF9BB2RNN3 333 aa14.79□□□□□ -0.04
SDCBP-202ENST00000413219 S1PR2O95136 353 aa14.79□□□□□ -0.04
SDCBP-202ENST00000413219 PLA2G5P39877 138 aa14.79□□□□□ -0.04
SDCBP-202ENST00000413219 OR1L1Q8NH94 360 aa14.79□□□□□ -0.04
SDCBP-202ENST00000413219 GALMQ96C23 342 aa14.79□□□□□ -0.04
SDCBP-202ENST00000413219 TRAPPC1Q9Y5R8 145 aa14.79□□□□□ -0.04
SDCBP-202ENST00000413219 ZNF407Q9C0G0 2248 aa14.79□□□□□ -0.04
SDCBP-202ENST00000413219 NXPH2O95156 264 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms