RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 ATF1P18846 271 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 CBLN1P23435 193 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 VAMP1P23763 118 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 MAGEA2P43356 314 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 RPL5P46777 297 aaKnown RBP4.62□□□□□ -1.67
LINC00396-201ENST00000411690 FXYD3Q14802 87 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 MED22Q15528 200 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 SMN1Q16637 294 aaKnown RBP4.62□□□□□ -1.67
LINC00396-201ENST00000411690 SERTAD4-AS1Q5TG53 156 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 KCTD20Q7Z5Y7 419 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 LINC00596Q86U02 117 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 CPOQ8IVL8 374 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 UBE2DNLQ8IWF7 75 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 SAXO1Q8IYX7 474 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 OR2C3Q8N628 320 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 CCDC54Q8NEL0 328 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 OR10V1Q8NGI7 309 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 OR1L6Q8NGR2 347 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 OR4A5Q8NH83 315 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 GRPEL2Q8TAA5 225 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 CCDC107Q8WV48 283 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 CACNG8Q8WXS5 425 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 PP6455Q8WZ26 134 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 DGCR14Q96DF8 476 aaKnown RBP4.62□□□□□ -1.67
LINC00396-201ENST00000411690 ASB9Q96DX5 294 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 OPALINQ96PE5 141 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 APOL4Q9BPW4 351 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 NIPSNAP1Q9BPW8 284 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 HRH4Q9H3N8 390 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 MAP6D1Q9H9H5 199 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 TVP23BQ9NYZ1 205 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 MLXQ9UH92 298 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 UBQLN2Q9UHD9 624 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 ENOPH1Q9UHY7 261 aa4.62□□□□□ -1.67
LINC00396-201ENST00000411690 TMEM30CPA0ZSE6 113 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 AQP12BA6NM10 295 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 H3BNX3 289 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 SLC22A1O15245 554 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 MAGEB4O15481 346 aaPredicted RBP4.61□□□□□ -1.67
LINC00396-201ENST00000411690 RPP14O95059 124 aaKnown RBP4.61□□□□□ -1.67
LINC00396-201ENST00000411690 TNFAIP8O95379 198 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 AMBPP02760 352 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 KRT8P05787 483 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 TMEM225BP0DP42 221 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 DBTP11182 482 aaKnown RBP4.61□□□□□ -1.67
LINC00396-201ENST00000411690 HLA-DMBP28068 263 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 MAP2K4P45985 399 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 OR3A3P47888 321 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 LGALS7P47929 136 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 Q5VSD8 79 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 IGFL4Q6B9Z1 124 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 ZNF322Q6U7Q0 402 aaPredicted RBP4.61□□□□□ -1.67
LINC00396-201ENST00000411690 CD300LDQ6UXZ3 194 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 RBPMS2Q6ZRY4 209 aaKnown RBP4.61□□□□□ -1.67
LINC00396-201ENST00000411690 Q6ZTC4 211 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 FAM220AQ7Z4H9 259 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 SPATA12Q7Z6I5 190 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 AQP12AQ8IXF9 295 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 PACRGLQ8N7B6 248 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 UXS1Q8NBZ7 420 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 CANT1Q8WVQ1 401 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 FRZBQ92765 325 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 GHSRQ92847 366 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 SPSB1Q96BD6 273 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 GALNT14Q96FL9 552 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 TMEM68Q96MH6 324 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 NDUFAF3Q9BU61 184 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 MRPS26Q9BYN8 205 aaKnown RBP4.61□□□□□ -1.67
LINC00396-201ENST00000411690 CSTL1Q9H114 145 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 COA4Q9NYJ1 87 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 PTTG2Q9NZH5 202 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 METTL1Q9UBP6 276 aaKnown RBP4.61□□□□□ -1.67
LINC00396-201ENST00000411690 ING4Q9UNL4 249 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 ORC6Q9Y5N6 252 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 TNFRSF18Q9Y5U5 241 aa4.61□□□□□ -1.67
LINC00396-201ENST00000411690 TRAV25A0A0B4J276 109 aa4.6□□□□□ -1.67
LINC00396-201ENST00000411690 TCRBV5S2A0A599 114 aa4.6□□□□□ -1.67
LINC00396-201ENST00000411690 MPTX1A8MV57 137 aa4.6□□□□□ -1.67
LINC00396-201ENST00000411690 ZNF701M0R085 212 aaPredicted RBP4.6□□□□□ -1.67
LINC00396-201ENST00000411690 SPINT2O43291 252 aa4.6□□□□□ -1.67
LINC00396-201ENST00000411690 SLC2A5P22732 501 aa4.6□□□□□ -1.67
LINC00396-201ENST00000411690 CRISP1P54107 249 aa4.6□□□□□ -1.67
LINC00396-201ENST00000411690 CXCR4P61073 352 aa4.6□□□□□ -1.67
LINC00396-201ENST00000411690 MORN2Q502X0 79 aa4.6□□□□□ -1.67
LINC00396-201ENST00000411690 TMEM236Q5W0B7 351 aa4.6□□□□□ -1.67
LINC00396-201ENST00000411690 FAM131AQ6UXB0 335 aa4.6□□□□□ -1.67
LINC00396-201ENST00000411690 UTS2BQ765I0 119 aa4.6□□□□□ -1.67
LINC00396-201ENST00000411690 GID4Q8IVV7 300 aa4.6□□□□□ -1.67
LINC00396-201ENST00000411690 ODF3L1Q8IXM7 274 aa4.6□□□□□ -1.67
LINC00396-201ENST00000411690 ADGRG5Q8IZF4 528 aa4.6□□□□□ -1.67
LINC00396-201ENST00000411690 PRR18Q8N4B5 295 aa4.6□□□□□ -1.67
LINC00396-201ENST00000411690 SUMF2Q8NBJ7 301 aa4.6□□□□□ -1.67
LINC00396-201ENST00000411690 BBS1Q8NFJ9 593 aa4.6□□□□□ -1.67
LINC00396-201ENST00000411690 OR13C5Q8NGS8 318 aa4.6□□□□□ -1.67
LINC00396-201ENST00000411690 KCNG3Q8TAE7 436 aa4.6□□□□□ -1.67
LINC00396-201ENST00000411690 PYDC1Q8WXC3 89 aa4.6□□□□□ -1.67
LINC00396-201ENST00000411690 PPP1R14BQ96C90 147 aa4.6□□□□□ -1.67
LINC00396-201ENST00000411690 MRPS24Q96EL2 167 aaKnown RBP4.6□□□□□ -1.67
LINC00396-201ENST00000411690 ADAT3Q96EY9 351 aaPredicted RBP4.6□□□□□ -1.67
LINC00396-201ENST00000411690 MRPL48Q96GC5 212 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms