RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 ITLN1Q8WWA0 313 aa11.32□□□□□ -0.6
LIMS1-205ENST00000410093 SNRNP40Q96DI7 357 aaKnown RBP11.32□□□□□ -0.6
LIMS1-205ENST00000410093 MRPL37Q9BZE1 423 aaKnown RBP11.32□□□□□ -0.6
LIMS1-205ENST00000410093 NKX6-2Q9C056 277 aaPredicted RBP11.32□□□□□ -0.6
LIMS1-205ENST00000410093 MAGT1Q9H0U3 335 aa11.32□□□□□ -0.6
LIMS1-205ENST00000410093 HSPB7Q9UBY9 170 aa11.32□□□□□ -0.6
LIMS1-205ENST00000410093 SVILO95425 2214 aa11.32□□□□□ -0.6
LIMS1-205ENST00000410093 IGHV3-64DA0A0J9YX35 117 aa11.31□□□□□ -0.6
LIMS1-205ENST00000410093 SPRY3O43610 288 aa11.31□□□□□ -0.6
LIMS1-205ENST00000410093 SCO1O75880 301 aa11.31□□□□□ -0.6
LIMS1-205ENST00000410093 HBE1P02100 147 aa11.31□□□□□ -0.6
LIMS1-205ENST00000410093 P0C879 139 aa11.31□□□□□ -0.6
LIMS1-205ENST00000410093 EGR1P18146 543 aa11.31□□□□□ -0.6
LIMS1-205ENST00000410093 EPHA1P21709 976 aa11.31□□□□□ -0.6
LIMS1-205ENST00000410093 SNCAP37840 140 aa11.31□□□□□ -0.6
LIMS1-205ENST00000410093 DYNLT3P51808 116 aa11.31□□□□□ -0.6
LIMS1-205ENST00000410093 TEX36Q5VZQ5 186 aa11.31□□□□□ -0.6
LIMS1-205ENST00000410093 OR2G3Q8NGZ4 309 aa11.31□□□□□ -0.6
LIMS1-205ENST00000410093 GPHA2Q96T91 129 aa11.31□□□□□ -0.6
LIMS1-205ENST00000410093 VKORC1Q9BQB6 163 aa11.31□□□□□ -0.6
LIMS1-205ENST00000410093 PSMG3Q9BT73 122 aaPredicted RBP11.31□□□□□ -0.6
LIMS1-205ENST00000410093 ZNF665Q9H7R5 613 aa11.31□□□□□ -0.6
LIMS1-205ENST00000410093 GCM1Q9NP62 436 aa11.31□□□□□ -0.6
LIMS1-205ENST00000410093 PSENENQ9NZ42 101 aa11.31□□□□□ -0.6
LIMS1-205ENST00000410093 KPTNQ9Y664 436 aa11.31□□□□□ -0.6
LIMS1-205ENST00000410093 NBASA2RRP1 2371 aa11.31□□□□□ -0.6
LIMS1-205ENST00000410093 A0A0G2JRQ6 117 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 IGHV1-46P01743 117 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 ATP6V0CP27449 155 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 GPR12P47775 334 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 CASP6P55212 293 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 TLE4Q04727 773 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 BTN1A1Q13410 526 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 MORN2Q502X0 79 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 PRR30Q53SZ7 412 aaPredicted RBP11.3□□□□□ -0.6
LIMS1-205ENST00000410093 HSD17B11Q8NBQ5 300 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 OR10A7Q8NGE5 316 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 SCGB1C1Q8TD33 95 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 TCTEX1D2Q8WW35 142 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 RND1Q92730 232 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 BSCL2Q96G97 398 aaPredicted RBP11.3□□□□□ -0.6
LIMS1-205ENST00000410093 AGMATQ9BSE5 352 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 EGLN1Q9GZT9 426 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 LINC00574Q9H8X3 128 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 GNG12Q9UBI6 72 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 TMA7Q9Y2S6 64 aaKnown RBP11.3□□□□□ -0.6
LIMS1-205ENST00000410093 MYO18BQ8IUG5 2567 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 TENM4Q6N022 2769 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 C3orf80F5H4A9 247 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 TMEM50AO95807 157 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 CGB3P0DN86 165 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 CGB7P0DN87 165 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 CCKARP32238 428 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 PPP1CCP36873 323 aaKnown RBP11.3□□□□□ -0.6
LIMS1-205ENST00000410093 UQCRFS1P47985 274 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 UBE2KP61086 200 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 SERF2P84101 59 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 TNFRSF9Q07011 255 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 ZNF616Q08AN1 781 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 ZNF273Q14593 569 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 CLINT1Q14677 625 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 AKR1C8PQ5T2L2 129 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 STUMQ69YW2 141 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 VHLLQ6RSH7 139 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 Q6ZRM9 215 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 C1orf87Q8N0U7 546 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 CORO2AQ92828 525 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 RBMXL1Q96E39 390 aaKnown RBP11.3□□□□□ -0.6
LIMS1-205ENST00000410093 ADTRPQ96IZ2 230 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 UNKLQ9H9P5 680 aaKnown RBP11.3□□□□□ -0.6
LIMS1-205ENST00000410093 PLA2G2EQ9NZK7 142 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 METRNQ9UJH8 293 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 PRELID3BQ9Y3B1 194 aa11.3□□□□□ -0.6
LIMS1-205ENST00000410093 ARID1AO14497 2285 aa11.29□□□□□ -0.6
LIMS1-205ENST00000410093 TRGV10A0A0A0MS01 117 aa11.29□□□□□ -0.6
LIMS1-205ENST00000410093 ZNF729A6NN14 1252 aaPredicted RBP11.29□□□□□ -0.6
LIMS1-205ENST00000410093 SOX15O60248 233 aa11.29□□□□□ -0.6
LIMS1-205ENST00000410093 CST7O76096 145 aa11.29□□□□□ -0.6
LIMS1-205ENST00000410093 HPRT1P00492 218 aa11.29□□□□□ -0.6
LIMS1-205ENST00000410093 OMGP23515 440 aa11.29□□□□□ -0.6
LIMS1-205ENST00000410093 SSTR5P35346 364 aa11.29□□□□□ -0.6
LIMS1-205ENST00000410093 EDDM3AQ14507 147 aa11.29□□□□□ -0.6
LIMS1-205ENST00000410093 AARDQ4LEZ3 155 aa11.29□□□□□ -0.6
LIMS1-205ENST00000410093 ALKBH2Q6NS38 261 aa11.29□□□□□ -0.6
LIMS1-205ENST00000410093 SLC25A24Q6NUK1 477 aa11.29□□□□□ -0.6
LIMS1-205ENST00000410093 CLEC9AQ6UXN8 241 aa11.29□□□□□ -0.6
LIMS1-205ENST00000410093 H2BFWTQ7Z2G1 175 aa11.29□□□□□ -0.6
LIMS1-205ENST00000410093 PARP12Q9H0J9 701 aaKnown RBP11.29□□□□□ -0.6
LIMS1-205ENST00000410093 TIMM9Q9Y5J7 89 aa11.29□□□□□ -0.6
LIMS1-205ENST00000410093 RP1L1Q8IWN7 2480 aaPredicted RBP11.28□□□□□ -0.6
LIMS1-205ENST00000410093 TRAV1-1A0A0B4J248 108 aa11.28□□□□□ -0.6
LIMS1-205ENST00000410093 TRAV38-1A0A0B4J264 116 aa11.28□□□□□ -0.6
LIMS1-205ENST00000410093 KBTBD11-OT1A0A1B0GTJ5 212 aa11.28□□□□□ -0.6
LIMS1-205ENST00000410093 NKX6-3A6NJ46 265 aa11.28□□□□□ -0.6
LIMS1-205ENST00000410093 C17orf100A8MU93 164 aa11.28□□□□□ -0.6
LIMS1-205ENST00000410093 RPP30P78346 268 aaKnown RBP11.28□□□□□ -0.6
LIMS1-205ENST00000410093 GUK1Q16774 197 aa11.28□□□□□ -0.6
LIMS1-205ENST00000410093 Q3ZCU0 254 aa11.28□□□□□ -0.6
LIMS1-205ENST00000410093 TMEM182Q6ZP80 229 aaPredicted RBP11.28□□□□□ -0.6
LIMS1-205ENST00000410093 ZNF788Q6ZQV5 615 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms