RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 RNF175Q8N4F7 328 aa3.22□□□□□ -1.89
LSM5-205ENST00000409952 FER1L6-AS1Q8NA97 138 aa3.22□□□□□ -1.89
LSM5-205ENST00000409952 OR4A5Q8NH83 315 aa3.22□□□□□ -1.89
LSM5-205ENST00000409952 CMBLQ96DG6 245 aa3.22□□□□□ -1.89
LSM5-205ENST00000409952 FAM60AQ9NP50 221 aa3.22□□□□□ -1.89
LSM5-205ENST00000409952 ANAPC10Q9UM13 185 aa3.22□□□□□ -1.89
LSM5-205ENST00000409952 KIF25-AS1Q9Y6Z4 181 aa3.22□□□□□ -1.89
LSM5-205ENST00000409952 KDM6BO15054 1643 aa3.22□□□□□ -1.89
LSM5-205ENST00000409952 DCCP43146 1447 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 IGHV3OR15-7A0A075B7D8 119 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 FAM236DA0A1B0GTK5 79 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 OR5H14A6NHG9 310 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 ZNF850A8MQ14 1090 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 K7ERS5 55 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 ATG12O94817 140 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 APOMO95445 188 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 CCNE2O96020 404 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 OPN1SWP03999 348 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 PFN1P07737 140 aaKnown RBP3.21□□□□□ -1.9
LSM5-205ENST00000409952 FAM236CP0DP71 79 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 CD34P28906 385 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 OR10J1P30954 320 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 TGFBR1P36897 503 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 GNG3P63215 75 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 FABP9Q0Z7S8 132 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 PDGFRLQ15198 375 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 TSNQ15631 228 aaKnown RBP3.21□□□□□ -1.9
LSM5-205ENST00000409952 RNF212Q495C1 297 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 ZCWPW2Q504Y3 356 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 LRP11Q86VZ4 500 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 CYB561D1Q8N8Q1 229 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 OR52L1Q8NGH7 329 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 DYDC1Q8WWB3 177 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 SHANK2-AS3Q9BTD1 123 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 ZNF331Q9NQX6 463 aaPredicted RBP3.21□□□□□ -1.9
LSM5-205ENST00000409952 BIN3Q9NQY0 253 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 C14orf105Q9NVL8 296 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 CMTM6Q9NX76 183 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 DHCR7Q9UBM7 475 aaKnown RBP3.21□□□□□ -1.9
LSM5-205ENST00000409952 TBX21Q9UL17 535 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 UFC1Q9Y3C8 167 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 DYSFO75923 2080 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 GRIN2BQ13224 1484 aa3.21□□□□□ -1.9
LSM5-205ENST00000409952 FHAD1B1AJZ9 1412 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 AHDC1Q5TGY3 1603 aaPredicted RBP3.2□□□□□ -1.9
LSM5-205ENST00000409952 LTBP1Q14766 1721 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 IGHV3-21A0A0B4J1V1 117 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 IGHV1-69-2A0A0G2JMI3 117 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 EXOC1LA0A1B0GW35 172 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 hADV38S2A0JD32 116 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 KNCNA6PVL3 124 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 PPP5D1E7EU14 171 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 IGHV1-46P01743 117 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 HLA-DQB2P05538 268 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 SERPINA7P05543 415 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 ADRA2AP08913 450 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 PTHLHP12272 177 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 DAPP51397 102 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 HSPE1P61604 102 aaKnown RBP3.2□□□□□ -1.9
LSM5-205ENST00000409952 SNRPD2P62316 118 aaKnown RBP3.2□□□□□ -1.9
LSM5-205ENST00000409952 Q5W150 140 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 SMARCD3Q6STE5 483 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 Q6ZR03 302 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 DAZ4Q86SG3 579 aaKnown RBP3.2□□□□□ -1.9
LSM5-205ENST00000409952 PHF13Q86YI8 300 aaPredicted RBP3.2□□□□□ -1.9
LSM5-205ENST00000409952 C1orf174Q8IYL3 243 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 OR13C6PQ8NH95 151 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 L3HYPDHQ96EM0 354 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 CNBD2Q96M20 576 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 B9D2Q9BPU9 175 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 TSSK6Q9BXA6 273 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 RNASE7Q9H1E1 156 aaKnown RBP3.2□□□□□ -1.9
LSM5-205ENST00000409952 ZNF286AQ9HBT8 521 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 DAZ1Q9NQZ3 744 aaKnown RBP3.2□□□□□ -1.9
LSM5-205ENST00000409952 RSL24D1Q9UHA3 163 aaKnown RBP3.2□□□□□ -1.9
LSM5-205ENST00000409952 UTP11Q9Y3A2 253 aaKnown RBP3.2□□□□□ -1.9
LSM5-205ENST00000409952 MRPS16Q9Y3D3 137 aaKnown RBP3.2□□□□□ -1.9
LSM5-205ENST00000409952 TIMM22Q9Y584 194 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 MTUS2Q5JR59 1369 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 TSPOAP1O95153 1857 aa3.2□□□□□ -1.9
LSM5-205ENST00000409952 TRAV26-2A0A0B4J265 109 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 FUOMA2VDF0 154 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 PINLYPA6NC86 204 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 KRTAP9-6A8MVA2 160 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 LEUTXA8MZ59 168 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 OR11H12B2RN74 326 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 PANO1I0J062 215 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 GSTZ1O43708 216 aaPredicted RBP3.19□□□□□ -1.9
LSM5-205ENST00000409952 GPR75O95800 540 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 NRASP01111 189 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 HRASP01112 189 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 KRASP01116 189 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 IFI30P13284 250 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 NTF3P20783 257 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 SERPINB1P30740 379 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 OPRM1P35372 400 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 GABRA4P48169 554 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 NOVP48745 357 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 TCTAP57738 103 aa3.19□□□□□ -1.9
LSM5-205ENST00000409952 RAB4BP61018 213 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms