RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 PGLYRP3Q96LB9 341 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 GPR82Q96P67 336 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 PAM16Q9Y3D7 125 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 SCN7AQ01118 1682 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 AHRRA9YTQ3 701 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 LYNX1G3V0Z9 82 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 INHBBP09529 407 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 LYNX1P0DP58 116 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 TMEM52Q8NDY8 209 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 SLC52A3Q9NQ40 469 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 PHF3Q92576 2039 aaKnown RBP7.28□□□□□ -1.24
SCN9A-203ENST00000409672 SCTP09683 121 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 PSG4Q00888 419 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 FXYD3Q14802 87 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 ABLIM2Q6H8Q1 611 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 CLEC19AQ6UXS0 136 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 SEC11CQ9BY50 192 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 SCN5AQ14524 2016 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 BRWD3Q6RI45 1802 aa7.28□□□□□ -1.24
SCN9A-203ENST00000409672 HYPMO75409 117 aa7.27□□□□□ -1.24
SCN9A-203ENST00000409672 IGKV1D-33P01593 117 aa7.27□□□□□ -1.24
SCN9A-203ENST00000409672 IGKV1-33P01594 117 aa7.27□□□□□ -1.24
SCN9A-203ENST00000409672 PEBP1P30086 187 aaKnown RBP7.27□□□□□ -1.24
SCN9A-203ENST00000409672 EFNB1P98172 346 aa7.27□□□□□ -1.24
SCN9A-203ENST00000409672 HLA-DRB5Q30154 266 aa7.27□□□□□ -1.24
SCN9A-203ENST00000409672 CLEC18BQ6UXF7 455 aa7.27□□□□□ -1.24
SCN9A-203ENST00000409672 C3orf56Q8N813 242 aa7.27□□□□□ -1.24
SCN9A-203ENST00000409672 MRPL13Q9BYD1 178 aaKnown RBP7.27□□□□□ -1.24
SCN9A-203ENST00000409672 TRBV5-4A0A0C4DH59 114 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 AP4M1O00189 453 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 PPYP01298 95 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 CTSBP07858 339 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 OR4X2Q8NGF9 303 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 BCORQ6W2J9 1755 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 KIF26BQ2KJY2 2108 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 MBPP02686 304 aaPredicted RBP7.27□□□□□ -1.25
SCN9A-203ENST00000409672 CTSDP07339 412 aaPredicted RBP7.27□□□□□ -1.25
SCN9A-203ENST00000409672 CD33P20138 364 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 FAM159AQ6UWV7 190 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 ZNRF1Q8ND25 227 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 MRAPQ8TCY5 172 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 OR10G8Q8NGN5 311 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 VN1R17PQ8TDU5 208 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 WNT5BQ9H1J7 359 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 DYSFO75923 2080 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 TRAV1-2A0A0B4J238 106 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 A0A1W2PQF6 199 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 C7orf71A4D174 169 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 FXYD7P58549 80 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 IQCJQ1A5X6 159 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 HSPB8Q9UJY1 196 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 USP54Q70EL1 1684 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 M0R381 172 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 HIST1H1BP16401 226 aaKnown RBP7.27□□□□□ -1.25
SCN9A-203ENST00000409672 COLCA1Q6ZS62 124 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 FUT9Q9Y231 359 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 DIRC3C9JPN6 131 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 OR2H2O95918 312 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 SLC25A1P53007 311 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 RELQ04864 619 aaPredicted RBP7.27□□□□□ -1.25
SCN9A-203ENST00000409672 EEF1AKMT3Q96AZ1 226 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 COX14Q96I36 57 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 TMEM101Q96IK0 257 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 PLSCR2Q9NRY7 297 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 ARFGEF1Q9Y6D6 1849 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 SDK2Q58EX2 2172 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 ANOS1P23352 680 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 ZNF721Q8TF20 911 aa7.27□□□□□ -1.25
SCN9A-203ENST00000409672 MRM2Q9UI43 246 aaKnown RBP7.27□□□□□ -1.25
SCN9A-203ENST00000409672 ANK1P16157 1881 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 TMEM50BP56557 158 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 ZNF770Q6IQ21 691 aaPredicted RBP7.26□□□□□ -1.25
SCN9A-203ENST00000409672 PRSS42Q7Z5A4 293 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 SIGLEC12Q96PQ1 595 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 METRNQ9UJH8 293 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 TMEM210A6NLX4 147 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 MOSP00540 346 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 C10orf90Q96M02 699 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 NUDT16L1Q9BRJ7 211 aaKnown RBP7.26□□□□□ -1.25
SCN9A-203ENST00000409672 GLI3P10071 1580 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 PGPA6NDG6 321 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 HINT1P49773 126 aaPredicted RBP7.26□□□□□ -1.25
SCN9A-203ENST00000409672 CA10Q9NS85 328 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 PKD1L3Q7Z443 1732 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 TCRBV5S2A0A599 114 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 FOXH1O75593 365 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 MFAP4P55083 255 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 IL13RA2Q14627 380 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 TMEM183BQ1AE95 376 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 NPAP1Q9NZP6 1156 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 KCNE1BA0A087WTH5 132 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 SIAH2O43255 324 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 CEACAM4O75871 244 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 TIAF1O95411 115 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 LINC00869P0C866 280 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 LIMS2Q7Z4I7 341 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 ALS2Q96Q42 1657 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 CADM3Q8N126 398 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 LSMEM1Q8N8F7 131 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 C12orf57Q99622 126 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms