RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 NMUP48645 174 aa15.23■□□□□ 0.03
SMPD4-202ENST00000409031 C10orf113Q5VZT2 155 aa15.23■□□□□ 0.03
SMPD4-202ENST00000409031 ZNF385AQ96PM9 386 aaKnown RBP15.23■□□□□ 0.03
SMPD4-202ENST00000409031 IL36BQ9NZH7 164 aa15.23■□□□□ 0.03
SMPD4-202ENST00000409031 UCP1P25874 307 aa15.23■□□□□ 0.03
SMPD4-202ENST00000409031 RELBQ01201 579 aa15.23■□□□□ 0.03
SMPD4-202ENST00000409031 C1orf194Q5T5A4 169 aa15.23■□□□□ 0.03
SMPD4-202ENST00000409031 TMEM70Q9BUB7 260 aa15.23■□□□□ 0.03
SMPD4-202ENST00000409031 CDIPTO14735 213 aa15.23■□□□□ 0.03
SMPD4-202ENST00000409031 UCN2Q96RP3 112 aa15.23■□□□□ 0.03
SMPD4-202ENST00000409031 IL36RNQ9UBH0 155 aa15.23■□□□□ 0.03
SMPD4-202ENST00000409031 WNT10AQ9GZT5 417 aa15.23■□□□□ 0.03
SMPD4-202ENST00000409031 PRDM13Q9H4Q3 707 aa15.23■□□□□ 0.03
SMPD4-202ENST00000409031 ARID2Q68CP9 1835 aa15.23■□□□□ 0.03
SMPD4-202ENST00000409031 TPRP12270 2363 aaKnown RBP15.23■□□□□ 0.03
SMPD4-202ENST00000409031 OR2T8A6NH00 312 aa15.22■□□□□ 0.03
SMPD4-202ENST00000409031 CEACAM21Q3KPI0 293 aa15.22■□□□□ 0.03
SMPD4-202ENST00000409031 ASPHD2Q6ICH7 369 aa15.22■□□□□ 0.03
SMPD4-202ENST00000409031 PERPQ96FX8 193 aa15.22■□□□□ 0.03
SMPD4-202ENST00000409031 GPHA2Q96T91 129 aa15.22■□□□□ 0.03
SMPD4-202ENST00000409031 GPR35Q9HC97 309 aa15.22■□□□□ 0.03
SMPD4-202ENST00000409031 B4E171 279 aa15.22■□□□□ 0.03
SMPD4-202ENST00000409031 ARL14EPLP0DKL9 152 aa15.22■□□□□ 0.03
SMPD4-202ENST00000409031 MAS1LP35410 378 aa15.22■□□□□ 0.03
SMPD4-202ENST00000409031 P2RY6Q15077 328 aa15.22■□□□□ 0.03
SMPD4-202ENST00000409031 RBP4P02753 201 aa15.22■□□□□ 0.03
SMPD4-202ENST00000409031 MIC13Q5XKP0 118 aa15.22■□□□□ 0.03
SMPD4-202ENST00000409031 SCGB1D4Q6XE38 83 aa15.22■□□□□ 0.03
SMPD4-202ENST00000409031 SLC25A33Q9BSK2 321 aa15.22■□□□□ 0.03
SMPD4-202ENST00000409031 CXXC4Q9H2H0 198 aa15.22■□□□□ 0.03
SMPD4-202ENST00000409031 SEBOXQ9HB31 216 aaPredicted RBP15.22■□□□□ 0.03
SMPD4-202ENST00000409031 SYNGR1O43759 233 aa15.21■□□□□ 0.03
SMPD4-202ENST00000409031 TNFSF13O75888 250 aa15.21■□□□□ 0.03
SMPD4-202ENST00000409031 NUDT3O95989 172 aa15.21■□□□□ 0.03
SMPD4-202ENST00000409031 TMEM240Q5SV17 173 aa15.21■□□□□ 0.03
SMPD4-202ENST00000409031 VASH2Q86V25 355 aa15.21■□□□□ 0.03
SMPD4-202ENST00000409031 OR1B1Q8NGR6 318 aa15.21■□□□□ 0.03
SMPD4-202ENST00000409031 LRRC29Q8WV35 223 aa15.21■□□□□ 0.03
SMPD4-202ENST00000409031 DPF1Q92782 380 aa15.21■□□□□ 0.03
SMPD4-202ENST00000409031 EGR1P18146 543 aa15.21■□□□□ 0.03
SMPD4-202ENST00000409031 LGALS4P56470 323 aa15.21■□□□□ 0.03
SMPD4-202ENST00000409031 WDR74Q6RFH5 385 aaPredicted RBP15.21■□□□□ 0.03
SMPD4-202ENST00000409031 MRPL52Q86TS9 123 aaKnown RBP15.21■□□□□ 0.03
SMPD4-202ENST00000409031 PAXXQ9BUH6 204 aa15.21■□□□□ 0.03
SMPD4-202ENST00000409031 SH3BGRL2Q9UJC5 107 aa15.21■□□□□ 0.03
SMPD4-202ENST00000409031 CCL20P78556 96 aa15.21■□□□□ 0.02
SMPD4-202ENST00000409031 OR2Z1Q8NG97 314 aa15.21■□□□□ 0.02
SMPD4-202ENST00000409031 ABHD14AQ9BUJ0 271 aa15.21■□□□□ 0.02
SMPD4-202ENST00000409031 M0R296 226 aa15.2■□□□□ 0.02
SMPD4-202ENST00000409031 OR8B2Q96RD0 313 aa15.2■□□□□ 0.02
SMPD4-202ENST00000409031 PLSCR2Q9NRY7 297 aa15.2■□□□□ 0.02
SMPD4-202ENST00000409031 GBF1Q92538 1859 aa15.2■□□□□ 0.02
SMPD4-202ENST00000409031 ZNF236Q9UL36 1845 aa15.2■□□□□ 0.02
SMPD4-202ENST00000409031 COL9A1P20849 921 aa15.2■□□□□ 0.02
SMPD4-202ENST00000409031 RAB37Q96AX2 223 aa15.2■□□□□ 0.02
SMPD4-202ENST00000409031 ASCL3Q9NQ33 180 aa15.2■□□□□ 0.02
SMPD4-202ENST00000409031 SERF1AO75920 110 aa15.2■□□□□ 0.02
SMPD4-202ENST00000409031 FXYD3Q14802 87 aa15.2■□□□□ 0.02
SMPD4-202ENST00000409031 FBLN7Q53RD9 439 aa15.2■□□□□ 0.02
SMPD4-202ENST00000409031 PRR32B1ATL7 298 aa15.19■□□□□ 0.02
SMPD4-202ENST00000409031 S100A4P26447 101 aaKnown RBP15.19■□□□□ 0.02
SMPD4-202ENST00000409031 C1QL2Q7Z5L3 287 aa15.19■□□□□ 0.02
SMPD4-202ENST00000409031 OTOFQ9HC10 1997 aa15.19■□□□□ 0.02
SMPD4-202ENST00000409031 MARCH11A6NNE9 402 aa15.19■□□□□ 0.02
SMPD4-202ENST00000409031 J3QR06 171 aa15.19■□□□□ 0.02
SMPD4-202ENST00000409031 LYPD3O95274 346 aa15.19■□□□□ 0.02
SMPD4-202ENST00000409031 CLDN14O95500 239 aa15.19■□□□□ 0.02
SMPD4-202ENST00000409031 SRSF9Q13242 221 aaKnown RBP eCLIP15.19■□□□□ 0.02
SMPD4-202ENST00000409031 IZUMO4Q1ZYL8 232 aa15.19■□□□□ 0.02
SMPD4-202ENST00000409031 SARAFQ96BY9 339 aa15.19■□□□□ 0.02
SMPD4-202ENST00000409031 IMMP2LQ96T52 175 aa15.19■□□□□ 0.02
SMPD4-202ENST00000409031 PROCRQ9UNN8 238 aa15.19■□□□□ 0.02
SMPD4-202ENST00000409031 SPINT1O43278 529 aa15.19■□□□□ 0.02
SMPD4-202ENST00000409031 PSG4Q00888 419 aa15.19■□□□□ 0.02
SMPD4-202ENST00000409031 SAXO1Q8IYX7 474 aa15.19■□□□□ 0.02
SMPD4-202ENST00000409031 NRN1Q9NPD7 142 aa15.19■□□□□ 0.02
SMPD4-202ENST00000409031 RPL31P62899 125 aaKnown RBP15.18■□□□□ 0.02
SMPD4-202ENST00000409031 NFAM1Q8NET5 270 aaPredicted RBP15.18■□□□□ 0.02
SMPD4-202ENST00000409031 CRYBB3P26998 211 aa15.18■□□□□ 0.02
SMPD4-202ENST00000409031 ZNF645Q8N7E2 425 aa15.18■□□□□ 0.02
SMPD4-202ENST00000409031 KLF2Q9Y5W3 355 aaPredicted RBP15.18■□□□□ 0.02
SMPD4-202ENST00000409031 LOC101059948A0A1B0GTJ6 334 aa15.18■□□□□ 0.02
SMPD4-202ENST00000409031 LIPFP07098 398 aa15.18■□□□□ 0.02
SMPD4-202ENST00000409031 OTX1P32242 354 aaPredicted RBP15.18■□□□□ 0.02
SMPD4-202ENST00000409031 IGLV3-21P80748 117 aaPredicted RBP15.18■□□□□ 0.02
SMPD4-202ENST00000409031 CADM4Q8NFZ8 388 aa15.18■□□□□ 0.02
SMPD4-202ENST00000409031 GUCD1Q96NT3 240 aa15.18■□□□□ 0.02
SMPD4-202ENST00000409031 ANKRD36A6QL64 1941 aa15.18■□□□□ 0.02
SMPD4-202ENST00000409031 E9PQ18 207 aa15.18■□□□□ 0.02
SMPD4-202ENST00000409031 ZG16O60844 167 aa15.18■□□□□ 0.02
SMPD4-202ENST00000409031 GBGT1Q8N5D6 347 aa15.18■□□□□ 0.02
SMPD4-202ENST00000409031 FLYWCH2Q96CP2 140 aaKnown RBP15.18■□□□□ 0.02
SMPD4-202ENST00000409031 UBR3Q6ZT12 1888 aa15.18■□□□□ 0.02
SMPD4-202ENST00000409031 IGHV3-13P01766 116 aa15.17■□□□□ 0.02
SMPD4-202ENST00000409031 IGHV3-7P01780 117 aa15.17■□□□□ 0.02
SMPD4-202ENST00000409031 GCSHP23434 173 aa15.17■□□□□ 0.02
SMPD4-202ENST00000409031 WNT5AP41221 380 aa15.17■□□□□ 0.02
SMPD4-202ENST00000409031 NPBWR2P48146 333 aa15.17■□□□□ 0.02
SMPD4-202ENST00000409031 PSMB2P49721 201 aa15.17■□□□□ 0.02
SMPD4-202ENST00000409031 C18orf12Q96KH6 178 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms