RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 ZNF626Q68DY1 528 aa8.03□□□□□ -1.12
NIF3L1-202ENST00000409020 SFRP4Q6FHJ7 346 aaPredicted RBP8.03□□□□□ -1.12
NIF3L1-202ENST00000409020 ZNF826PQ6ZT77 177 aa8.03□□□□□ -1.12
NIF3L1-202ENST00000409020 PRSS45Q7RTY3 260 aa8.03□□□□□ -1.12
NIF3L1-202ENST00000409020 WDR86Q86TI4 376 aa8.03□□□□□ -1.12
NIF3L1-202ENST00000409020 TOMM5Q8N4H5 51 aa8.03□□□□□ -1.12
NIF3L1-202ENST00000409020 ZDHHC22Q8N966 263 aa8.03□□□□□ -1.12
NIF3L1-202ENST00000409020 OR6N2Q8NGY6 317 aa8.03□□□□□ -1.12
NIF3L1-202ENST00000409020 RNF141Q8WVD5 230 aa8.03□□□□□ -1.12
NIF3L1-202ENST00000409020 TAF15Q92804 592 aaKnown RBP eCLIP8.03□□□□□ -1.12
NIF3L1-202ENST00000409020 DUX5Q96PT3 197 aa8.03□□□□□ -1.12
NIF3L1-202ENST00000409020 HIST1H2BLQ99880 126 aa8.03□□□□□ -1.12
NIF3L1-202ENST00000409020 ABHD6Q9BV23 337 aa8.03□□□□□ -1.12
NIF3L1-202ENST00000409020 SELENOIQ9C0D9 397 aa8.03□□□□□ -1.12
NIF3L1-202ENST00000409020 FXYD6Q9H0Q3 95 aa8.03□□□□□ -1.12
NIF3L1-202ENST00000409020 TMEM140Q9NV12 185 aa8.03□□□□□ -1.12
NIF3L1-202ENST00000409020 POLR3KQ9Y2Y1 108 aaPredicted RBP8.03□□□□□ -1.12
NIF3L1-202ENST00000409020 PPIAL4EA0A075B759 164 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 PPIAL4CA0A0B4J2A2 164 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 GGT3PA6NGU5 568 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 ZNF878C9JN71 531 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 PPIAL4DF5H284 164 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 MMP23AO75900 390 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 ARG1P05089 322 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 CD5P06127 495 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 PPIAL4FP0DN26 164 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 CPEP16870 476 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 GATA3P23771 443 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 TAF13Q15543 124 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 ODF4Q2M2E3 257 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 ZNF841Q6ZN19 808 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 SLC16A9Q7RTY1 509 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 SLC35E3Q7Z769 313 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 MUC20Q8N307 709 aaPredicted RBP8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 BOLLQ8N9W6 283 aaKnown RBP8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 OR51D1Q8NGF3 324 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 OR51G2Q8NGK0 314 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 OR4A4PQ8NGN8 299 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 OR1L6Q8NGR2 347 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 Q8TCH9 128 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 ZNF418Q8TF45 676 aaPredicted RBP8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 RNF133Q8WVZ7 376 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 FAM110AQ9BQ89 295 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 C20orf144Q9BQM9 153 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 CTSZQ9UBR2 303 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 PPIAL4AQ9Y536 164 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 TGIF2-C20orf24A0A0A6YYL0 155 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 ARRDC5A6NEK1 342 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 LRRC30A6NM36 301 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 M0R129 80 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 GSTZ1O43708 216 aaPredicted RBP8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 TSPAN15O95858 294 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 GRPP07492 148 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 EGR1P18146 543 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 AKR1C2P52895 323 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 ZNF121P58317 390 aaPredicted RBP8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 ERVFRD-1P60508 538 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 FAM3AP98173 230 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 PAX8Q06710 450 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 DUX4L9Q6RFH8 374 aaPredicted RBP8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 Q6ZTK2 550 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 FAM57BQ71RH2 274 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 FGFRL1Q8N441 504 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 SIGLECL1Q8N7X8 197 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 OR4C5Q8NGB2 326 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 NUDCD2Q8WVJ2 157 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 SPSB4Q96A44 273 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 REEP6Q96HR9 211 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 SLC35E1Q96K37 410 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 C1orf147Q96MC9 270 aaPredicted RBP8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 MIEN1Q9BRT3 115 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 SSBP3Q9BWW4 388 aaPredicted RBP8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 MAGT1Q9H0U3 335 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 C1orf123Q9NWV4 160 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 OR5V1Q9UGF6 321 aa8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 TBL2Q9Y4P3 447 aaKnown RBP8.02□□□□□ -1.13
NIF3L1-202ENST00000409020 PRKDCP78527 4128 aaKnown RBP8.01□□□□□ -1.13
NIF3L1-202ENST00000409020 IGHV3OR15-7A0A075B7D8 119 aa8.01□□□□□ -1.13
NIF3L1-202ENST00000409020 MDFIC2A0A1B0GVS7 189 aa8.01□□□□□ -1.13
NIF3L1-202ENST00000409020 UBE2QL1A1L167 161 aa8.01□□□□□ -1.13
NIF3L1-202ENST00000409020 PRR32B1ATL7 298 aa8.01□□□□□ -1.13
NIF3L1-202ENST00000409020 HIST1H2BKO60814 126 aa8.01□□□□□ -1.13
NIF3L1-202ENST00000409020 HIST1H2BJP06899 126 aa8.01□□□□□ -1.13
NIF3L1-202ENST00000409020 SLC25A4P12235 298 aa8.01□□□□□ -1.13
NIF3L1-202ENST00000409020 OSMP13725 252 aa8.01□□□□□ -1.13
NIF3L1-202ENST00000409020 HIST1H2BOP23527 126 aa8.01□□□□□ -1.13
NIF3L1-202ENST00000409020 HIST1H2BBP33778 126 aa8.01□□□□□ -1.13
NIF3L1-202ENST00000409020 RPS10P46783 165 aaKnown RBP8.01□□□□□ -1.13
NIF3L1-202ENST00000409020 HIST1H2BDP58876 126 aa8.01□□□□□ -1.13
NIF3L1-202ENST00000409020 HIST1H2BCP62807 126 aa8.01□□□□□ -1.13
NIF3L1-202ENST00000409020 GNB2P62879 340 aa8.01□□□□□ -1.13
NIF3L1-202ENST00000409020 CDK5Q00535 292 aa8.01□□□□□ -1.13
NIF3L1-202ENST00000409020 AKR1C1Q04828 323 aa8.01□□□□□ -1.13
NIF3L1-202ENST00000409020 MEF2DQ14814 521 aa8.01□□□□□ -1.13
NIF3L1-202ENST00000409020 HIST2H2BEQ16778 126 aa8.01□□□□□ -1.13
NIF3L1-202ENST00000409020 SLC22A6Q4U2R8 563 aa8.01□□□□□ -1.13
NIF3L1-202ENST00000409020 MORN2Q502X0 79 aa8.01□□□□□ -1.13
NIF3L1-202ENST00000409020 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.01□□□□□ -1.13
NIF3L1-202ENST00000409020 SAMD13Q5VXD3 122 aa8.01□□□□□ -1.13
NIF3L1-202ENST00000409020 BCDIN3DQ7Z5W3 292 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms