RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 ZNF883P0CG24 379 aa13.42□□□□□ -0.26
CCDC85A-201ENST00000407595 CFPP27918 469 aa13.42□□□□□ -0.26
CCDC85A-201ENST00000407595 DOCK11Q5JSL3 2073 aa13.42□□□□□ -0.26
CCDC85A-201ENST00000407595 RNF212BA8MTL3 300 aa13.42□□□□□ -0.26
CCDC85A-201ENST00000407595 ACTL6BO94805 426 aa13.42□□□□□ -0.26
CCDC85A-201ENST00000407595 SLC25A6P12236 298 aa13.42□□□□□ -0.26
CCDC85A-201ENST00000407595 CEACAM6P40199 344 aa13.42□□□□□ -0.26
CCDC85A-201ENST00000407595 OR3A1P47881 315 aa13.42□□□□□ -0.26
CCDC85A-201ENST00000407595 FAM214BQ7L5A3 538 aa13.42□□□□□ -0.26
CCDC85A-201ENST00000407595 ZIC4Q8N9L1 334 aa13.42□□□□□ -0.26
CCDC85A-201ENST00000407595 RBKSQ9H477 322 aa13.42□□□□□ -0.26
CCDC85A-201ENST00000407595 PARD6AQ9NPB6 346 aa13.42□□□□□ -0.26
CCDC85A-201ENST00000407595 LIN7CQ9NUP9 197 aaKnown RBP13.42□□□□□ -0.26
CCDC85A-201ENST00000407595 CELA3BP08861 270 aa13.41□□□□□ -0.26
CCDC85A-201ENST00000407595 KRTDAPP60985 99 aa13.41□□□□□ -0.26
CCDC85A-201ENST00000407595 CDPF1Q6NVV7 123 aa13.41□□□□□ -0.26
CCDC85A-201ENST00000407595 CPEB3Q8NE35 698 aaKnown RBP13.41□□□□□ -0.26
CCDC85A-201ENST00000407595 CCL17Q92583 94 aa13.41□□□□□ -0.26
CCDC85A-201ENST00000407595 TM2D1Q9BX74 207 aa13.41□□□□□ -0.26
CCDC85A-201ENST00000407595 CBLN4Q9NTU7 201 aa13.41□□□□□ -0.26
CCDC85A-201ENST00000407595 IL36RNQ9UBH0 155 aa13.41□□□□□ -0.26
CCDC85A-201ENST00000407595 E9PLN8 166 aa13.41□□□□□ -0.26
CCDC85A-201ENST00000407595 DNPH1O43598 174 aa13.41□□□□□ -0.26
CCDC85A-201ENST00000407595 ENSAO43768 121 aaKnown RBP13.41□□□□□ -0.26
CCDC85A-201ENST00000407595 ICAM4Q14773 271 aa13.41□□□□□ -0.26
CCDC85A-201ENST00000407595 RTP5Q14D33 572 aa13.41□□□□□ -0.26
CCDC85A-201ENST00000407595 LRRC29Q8WV35 223 aa13.41□□□□□ -0.26
CCDC85A-201ENST00000407595 GPR146Q96CH1 333 aa13.41□□□□□ -0.26
CCDC85A-201ENST00000407595 IGHV3OR15-7A0A075B7D8 119 aa13.41□□□□□ -0.26
CCDC85A-201ENST00000407595 IGHV2-70P01814 119 aa13.41□□□□□ -0.26
CCDC85A-201ENST00000407595 EGR1P18146 543 aa13.41□□□□□ -0.26
CCDC85A-201ENST00000407595 F2RP25116 425 aa13.41□□□□□ -0.26
CCDC85A-201ENST00000407595 CALHM1Q8IU99 346 aa13.41□□□□□ -0.26
CCDC85A-201ENST00000407595 OR1P1Q8NH06 330 aa13.41□□□□□ -0.26
CCDC85A-201ENST00000407595 C10orf35Q96D05 121 aa13.41□□□□□ -0.26
CCDC85A-201ENST00000407595 TMEM204Q9BSN7 226 aa13.41□□□□□ -0.26
CCDC85A-201ENST00000407595 FKBP11Q9NYL4 201 aa13.41□□□□□ -0.26
CCDC85A-201ENST00000407595 RPL36A-HNRNPH2H7BZ11 118 aa13.4□□□□□ -0.26
CCDC85A-201ENST00000407595 M0R143 59 aa13.4□□□□□ -0.26
CCDC85A-201ENST00000407595 NTF3P20783 257 aa13.4□□□□□ -0.26
CCDC85A-201ENST00000407595 ERVK-16P61578 105 aa13.4□□□□□ -0.26
CCDC85A-201ENST00000407595 HIST1H3AP68431 136 aa13.4□□□□□ -0.26
CCDC85A-201ENST00000407595 MSI2Q96DH6 328 aaKnown RBP13.4□□□□□ -0.26
CCDC85A-201ENST00000407595 SLC31A2O15432 143 aa13.4□□□□□ -0.26
CCDC85A-201ENST00000407595 SPINT2O43291 252 aa13.4□□□□□ -0.26
CCDC85A-201ENST00000407595 CRYABP02511 175 aaKnown RBP13.4□□□□□ -0.26
CCDC85A-201ENST00000407595 ACOT6Q3I5F7 207 aaPredicted RBP13.4□□□□□ -0.26
CCDC85A-201ENST00000407595 FOXD3Q9UJU5 478 aaPredicted RBP13.4□□□□□ -0.26
CCDC85A-201ENST00000407595 ZFYVE26Q68DK2 2539 aa13.4□□□□□ -0.26
CCDC85A-201ENST00000407595 NPIPB13A6NJU9 1138 aa13.4□□□□□ -0.26
CCDC85A-201ENST00000407595 NPIPB4C9JG80 1138 aa13.4□□□□□ -0.26
CCDC85A-201ENST00000407595 ZNF506Q5JVG8 444 aa13.4□□□□□ -0.26
CCDC85A-201ENST00000407595 BTF3L4Q96K17 158 aa13.4□□□□□ -0.26
CCDC85A-201ENST00000407595 C1orf147Q96MC9 270 aaPredicted RBP13.4□□□□□ -0.26
CCDC85A-201ENST00000407595 OR4C12Q96R67 309 aa13.4□□□□□ -0.26
CCDC85A-201ENST00000407595 PLA2G2EQ9NZK7 142 aa13.4□□□□□ -0.26
CCDC85A-201ENST00000407595 CCDC168Q8NDH2 2452 aa13.4□□□□□ -0.26
CCDC85A-201ENST00000407595 F6UZH7 168 aa13.39□□□□□ -0.27
CCDC85A-201ENST00000407595 LYL1P12980 280 aa13.39□□□□□ -0.27
CCDC85A-201ENST00000407595 TNFSF10P50591 281 aa13.39□□□□□ -0.27
CCDC85A-201ENST00000407595 GLRX2Q9NS18 164 aa13.39□□□□□ -0.27
CCDC85A-201ENST00000407595 DENND4AQ7Z401 1863 aa13.39□□□□□ -0.27
CCDC85A-201ENST00000407595 TRAV34A0A0B4J273 112 aa13.39□□□□□ -0.27
CCDC85A-201ENST00000407595 MEF2BQ02080 365 aaPredicted RBP13.39□□□□□ -0.27
CCDC85A-201ENST00000407595 CLDND2Q8NHS1 167 aa13.39□□□□□ -0.27
CCDC85A-201ENST00000407595 PAM16Q9Y3D7 125 aa13.39□□□□□ -0.27
CCDC85A-201ENST00000407595 PROB1E7EW31 1015 aa13.39□□□□□ -0.27
CCDC85A-201ENST00000407595 CYC1P08574 325 aa13.39□□□□□ -0.27
CCDC85A-201ENST00000407595 CCL8P80075 99 aa13.39□□□□□ -0.27
CCDC85A-201ENST00000407595 BTNL3Q6UXE8 466 aa13.39□□□□□ -0.27
CCDC85A-201ENST00000407595 NEIL1Q96FI4 390 aaPredicted RBP13.39□□□□□ -0.27
CCDC85A-201ENST00000407595 UHRF2Q96PU4 802 aa13.39□□□□□ -0.27
CCDC85A-201ENST00000407595 CTDSP1Q9GZU7 261 aa13.39□□□□□ -0.27
CCDC85A-201ENST00000407595 RIMS4Q9H426 269 aaPredicted RBP13.39□□□□□ -0.27
CCDC85A-201ENST00000407595 PGLYRP1O75594 196 aaPredicted RBP13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 SNRPCP09234 159 aaKnown RBP13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 GNG10P50151 68 aa13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 AESQ08117 197 aa13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 TMEM171Q8WVE6 324 aa13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 EDARADDQ8WWZ3 215 aa13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 OR2W1Q9Y3N9 320 aa13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 LOC102723971A0A1B0GUV8 181 aa13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 C11orf94C9JXX5 98 aa13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 IGHV2-5P01817 119 aa13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 TFF1P04155 84 aa13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 MGST1P10620 155 aaKnown RBP13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 PAX5Q02548 391 aa13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 COL10A1Q03692 680 aa13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 RAB31Q13636 194 aa13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 HIST3H2BBQ8N257 126 aa13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 KDF1Q8NAX2 398 aaPredicted RBP13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 SEBOXQ9HB31 216 aaPredicted RBP13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 LHX2P50458 406 aa13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 PLGLAQ15195 96 aa13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 MOGAT3Q86VF5 341 aa13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 OR4A16Q8NH70 328 aa13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 RCC1LQ96I51 464 aaKnown RBP13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 GMPPAQ96IJ6 420 aaPredicted RBP13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 LIME1Q9H400 295 aa13.38□□□□□ -0.27
CCDC85A-201ENST00000407595 CLN8Q9UBY8 286 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms