RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 GYPAP02724 150 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 CT45A10P0DMU9 189 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 APOBEC3AP31941 199 aaPredicted RBP4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 PI4KAP42356 2102 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 COMPP49747 757 aaPredicted RBP4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 RNF212Q495C1 297 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 SMIM15Q7Z3B0 74 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 LINC00518Q8N0U6 118 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 FGFRL1Q8N441 504 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 OR1L6Q8NGR2 347 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 TXNDC17Q9BRA2 123 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 SCNM1Q9BWG6 230 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 PRO3102Q9H379 93 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 ZNF331Q9NQX6 463 aaPredicted RBP4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 MIOXQ9UGB7 285 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 RPH3ALQ9UNE2 315 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 FANCMQ8IYD8 2048 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 A0A087WV48 116 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 J3QR06 171 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 MEF2CQ06413 473 aaPredicted RBP4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 KHDC3LQ587J8 217 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 C9orf152Q5JTZ5 239 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 FAM162BQ5T6X4 162 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 Q6ZS92 163 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 STXBP6Q8NFX7 210 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 NRIP2Q9BQI9 281 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 RTBDNQ9BSG5 229 aaPredicted RBP4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 NDFIP1Q9BT67 221 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 PATZ1Q9HBE1 687 aaKnown RBP4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 CLCF1Q9UBD9 225 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 TUBD1Q9UJT1 453 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 GAB2Q9UQC2 676 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 SDK2Q58EX2 2172 aa4.03□□□□□ -1.76
PCDH11X-207ENST00000406881 TRBV6-7A0A0A0MS04 114 aa4.03□□□□□ -1.77
PCDH11X-207ENST00000406881 OR10J4P0C629 311 aa4.03□□□□□ -1.77
PCDH11X-207ENST00000406881 ZNF90Q03938 601 aa4.03□□□□□ -1.77
PCDH11X-207ENST00000406881 BATFQ16520 125 aa4.03□□□□□ -1.77
PCDH11X-207ENST00000406881 ACSM6Q6P461 480 aa4.03□□□□□ -1.77
PCDH11X-207ENST00000406881 ZNF818PQ6ZRF7 136 aa4.03□□□□□ -1.77
PCDH11X-207ENST00000406881 DRAM1Q8N682 238 aa4.03□□□□□ -1.77
PCDH11X-207ENST00000406881 WDR31Q8NA23 367 aa4.03□□□□□ -1.77
PCDH11X-207ENST00000406881 OR9G1Q8NH87 305 aa4.03□□□□□ -1.77
PCDH11X-207ENST00000406881 FGFBP3Q8TAT2 258 aa4.03□□□□□ -1.77
PCDH11X-207ENST00000406881 MRPL30Q8TCC3 161 aaKnown RBP4.03□□□□□ -1.77
PCDH11X-207ENST00000406881 TMEM186Q96B77 213 aa4.03□□□□□ -1.77
PCDH11X-207ENST00000406881 RHOVQ96L33 236 aa4.03□□□□□ -1.77
PCDH11X-207ENST00000406881 SAMD10Q9BYL1 202 aa4.03□□□□□ -1.77
PCDH11X-207ENST00000406881 NPVFQ9HCQ7 196 aa4.03□□□□□ -1.77
PCDH11X-207ENST00000406881 OR51B2Q9Y5P1 312 aa4.03□□□□□ -1.77
PCDH11X-207ENST00000406881 TRBV23-1A0A0A0MS06 115 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 MEX3AA1L020 520 aaKnown RBP4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 XKRY2A2RUG3 117 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 MBD3L4A6NDZ8 208 aaPredicted RBP4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 MBD3L3A6NE82 208 aaPredicted RBP4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 MBD3L5A6NJ08 208 aaPredicted RBP4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 C12orf77C9JDV5 145 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 E9PLN8 166 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 ERVH48-1M5A8F1 160 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 CORTO00230 105 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 BMI1P35226 326 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 GLIPR1P48060 266 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 NPBWR1P48145 328 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 FAM27E3Q08E93 113 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 TNXAQ16473 311 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 TMEM88Q6PEY1 159 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 TEPPQ6URK8 271 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 ASCL4Q6XD76 172 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 SLC35E3Q7Z769 313 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 PIP4P1Q86T03 277 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 MMD2Q8IY49 270 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 TPRX1Q8N7U7 411 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 SLC24A4Q8NFF2 622 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 MBD3L2Q8NHZ7 208 aaPredicted RBP4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 RNASE6Q93091 150 aaKnown RBP4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 MISP3Q96FF7 219 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 VKORC1Q9BQB6 163 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 PROK2Q9HC23 129 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 OR1A1Q9P1Q5 309 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 WASHC3Q9Y3C0 194 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 TMEM56-RWDD3S4R434 201 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 ZNF318Q5VUA4 2279 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 NCBP2LA6PVI3 153 aaKnown RBP4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 RHBDL1O75783 438 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 YIF1AO95070 293 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 IGHV3-13P01766 116 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 IGHV3-7P01780 117 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 KIR2DL2P43627 348 aaPredicted RBP4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 CEBPDP49716 269 aaPredicted RBP4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 HSPE1P61604 102 aaKnown RBP4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 QRFPP83859 136 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 NHLH2Q02577 135 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 CXorf66Q5JRM2 361 aaPredicted RBP4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 MBNL2Q5VZF2 373 aaKnown RBP4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 SLC16A13Q7RTY0 426 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 LHFPL1Q86WI0 220 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 SPACA3Q8IXA5 215 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 LRTM2Q8N967 370 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 OR4F17Q8NGA8 305 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 LINC00052Q96N35 136 aa4.02□□□□□ -1.77
PCDH11X-207ENST00000406881 TMEM204Q9BSN7 226 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms