RNA–Protein interactions for RNA: ENST00000406854.5

PCNX4-203, Transcript of pecanex 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCNX4, Length 4,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-203ENST00000406854 FAM90A27PA6NNH2 459 aa12.54□□□□□ -0.4
PCNX4-203ENST00000406854 RAMP1O60894 148 aa12.54□□□□□ -0.4
PCNX4-203ENST00000406854 EIF3GO75821 320 aaKnown RBP eCLIP12.54□□□□□ -0.4
PCNX4-203ENST00000406854 BRS3P32247 399 aa12.54□□□□□ -0.4
PCNX4-203ENST00000406854 C10orf128Q5T292 105 aa12.54□□□□□ -0.4
PCNX4-203ENST00000406854 OR1L1Q8NH94 360 aa12.54□□□□□ -0.4
PCNX4-203ENST00000406854 PRDM14Q9GZV8 571 aa12.54□□□□□ -0.4
PCNX4-203ENST00000406854 WNT5BQ9H1J7 359 aa12.54□□□□□ -0.4
PCNX4-203ENST00000406854 OR51B2Q9Y5P1 312 aa12.54□□□□□ -0.4
PCNX4-203ENST00000406854 SPTAN1Q13813 2472 aaKnown RBP12.54□□□□□ -0.4
PCNX4-203ENST00000406854 A0A1W2PQM1 296 aa12.54□□□□□ -0.4
PCNX4-203ENST00000406854 A0A1W2PR77 199 aa12.54□□□□□ -0.4
PCNX4-203ENST00000406854 RNF222A6NCQ9 220 aa12.54□□□□□ -0.4
PCNX4-203ENST00000406854 FOXC1Q12948 553 aa12.54□□□□□ -0.4
PCNX4-203ENST00000406854 FAM209BQ5JX69 171 aa12.54□□□□□ -0.4
PCNX4-203ENST00000406854 NBASA2RRP1 2371 aa12.54□□□□□ -0.4
PCNX4-203ENST00000406854 TGIF2-C20orf24A0A0A6YYL0 155 aa12.54□□□□□ -0.4
PCNX4-203ENST00000406854 ISLRO14498 428 aa12.54□□□□□ -0.4
PCNX4-203ENST00000406854 PRSS1P07477 247 aa12.54□□□□□ -0.4
PCNX4-203ENST00000406854 CD3EP07766 207 aa12.54□□□□□ -0.4
PCNX4-203ENST00000406854 ACP1P24666 158 aa12.54□□□□□ -0.4
PCNX4-203ENST00000406854 SLC35B1P78383 322 aa12.54□□□□□ -0.4
PCNX4-203ENST00000406854 WDR25Q64LD2 544 aaPredicted RBP12.54□□□□□ -0.4
PCNX4-203ENST00000406854 ZNF236Q9UL36 1845 aa12.54□□□□□ -0.4
PCNX4-203ENST00000406854 M0QZ24 198 aa12.53□□□□□ -0.4
PCNX4-203ENST00000406854 APCSP02743 223 aa12.53□□□□□ -0.4
PCNX4-203ENST00000406854 LBHQ53QV2 105 aaPredicted RBP12.53□□□□□ -0.4
PCNX4-203ENST00000406854 ZNF818PQ6ZRF7 136 aa12.53□□□□□ -0.4
PCNX4-203ENST00000406854 RASL11BQ9BPW5 248 aa12.53□□□□□ -0.4
PCNX4-203ENST00000406854 IL17BQ9UHF5 180 aa12.53□□□□□ -0.4
PCNX4-203ENST00000406854 FREM3P0C091 2139 aa12.53□□□□□ -0.4
PCNX4-203ENST00000406854 DIRC3C9JPN6 131 aa12.53□□□□□ -0.4
PCNX4-203ENST00000406854 OR4A8P0C604 315 aa12.53□□□□□ -0.4
PCNX4-203ENST00000406854 SRP14P37108 136 aaKnown RBP12.53□□□□□ -0.4
PCNX4-203ENST00000406854 SUCLG1P53597 346 aaKnown RBP12.53□□□□□ -0.4
PCNX4-203ENST00000406854 RIGQ13278 110 aa12.53□□□□□ -0.4
PCNX4-203ENST00000406854 ATRAIDQ6UW56 229 aa12.53□□□□□ -0.4
PCNX4-203ENST00000406854 SAXO1Q8IYX7 474 aa12.53□□□□□ -0.4
PCNX4-203ENST00000406854 ZNF71Q9NQZ8 489 aaPredicted RBP12.53□□□□□ -0.4
PCNX4-203ENST00000406854 INTS1Q8N201 2190 aaKnown RBP12.53□□□□□ -0.4
PCNX4-203ENST00000406854 BRCA1P38398 1863 aaKnown RBP12.53□□□□□ -0.4
PCNX4-203ENST00000406854 CDX1P47902 265 aaPredicted RBP12.53□□□□□ -0.4
PCNX4-203ENST00000406854 ASPHD2Q6ICH7 369 aa12.53□□□□□ -0.4
PCNX4-203ENST00000406854 ZNF645Q8N7E2 425 aa12.53□□□□□ -0.4
PCNX4-203ENST00000406854 DNASE2BQ8WZ79 361 aa12.53□□□□□ -0.4
PCNX4-203ENST00000406854 TP53RKQ96S44 253 aa12.53□□□□□ -0.4
PCNX4-203ENST00000406854 MS4A5Q9H3V2 200 aa12.53□□□□□ -0.4
PCNX4-203ENST00000406854 REG1BP48304 166 aa12.53□□□□□ -0.4
PCNX4-203ENST00000406854 PAFAH1B2P68402 229 aa12.53□□□□□ -0.4
PCNX4-203ENST00000406854 TNFRSF9Q07011 255 aa12.53□□□□□ -0.4
PCNX4-203ENST00000406854 PCOLCEQ15113 449 aa12.53□□□□□ -0.4
PCNX4-203ENST00000406854 OR8I2Q8N0Y5 310 aa12.53□□□□□ -0.4
PCNX4-203ENST00000406854 ZNF552Q9H707 407 aaPredicted RBP12.53□□□□□ -0.4
PCNX4-203ENST00000406854 VWA1Q6PCB0 445 aa12.52□□□□□ -0.4
PCNX4-203ENST00000406854 HSPB9Q9BQS6 159 aa12.52□□□□□ -0.4
PCNX4-203ENST00000406854 MAP1LC3CQ9BXW4 147 aa12.52□□□□□ -0.4
PCNX4-203ENST00000406854 SRXN1Q9BYN0 137 aa12.52□□□□□ -0.4
PCNX4-203ENST00000406854 CARHSP1Q9Y2V2 147 aaKnown RBP12.52□□□□□ -0.4
PCNX4-203ENST00000406854 GREB1Q4ZG55 1949 aa12.52□□□□□ -0.4
PCNX4-203ENST00000406854 HEATR5BQ9P2D3 2071 aa12.52□□□□□ -0.4
PCNX4-203ENST00000406854 IGKV3D-11A0A0A0MRZ8 115 aa12.52□□□□□ -0.41
PCNX4-203ENST00000406854 MT-ND6P03923 174 aa12.52□□□□□ -0.41
PCNX4-203ENST00000406854 ZNF385CQ66K41 422 aaPredicted RBP12.52□□□□□ -0.41
PCNX4-203ENST00000406854 OR1P1Q8NH06 330 aa12.52□□□□□ -0.41
PCNX4-203ENST00000406854 FAM216AQ8WUB2 273 aa12.52□□□□□ -0.41
PCNX4-203ENST00000406854 ASCL3Q9NQ33 180 aa12.52□□□□□ -0.41
PCNX4-203ENST00000406854 EPOPA6NHQ4 379 aa12.52□□□□□ -0.41
PCNX4-203ENST00000406854 SNRPCP09234 159 aaKnown RBP12.52□□□□□ -0.41
PCNX4-203ENST00000406854 APELAP0DMC3 54 aa12.52□□□□□ -0.41
PCNX4-203ENST00000406854 ACACAQ13085 2346 aa12.52□□□□□ -0.41
PCNX4-203ENST00000406854 RALGAPA1Q6GYQ0 2036 aa12.52□□□□□ -0.41
PCNX4-203ENST00000406854 C1orf174Q8IYL3 243 aa12.52□□□□□ -0.41
PCNX4-203ENST00000406854 SAP25Q8TEE9 199 aa12.52□□□□□ -0.41
PCNX4-203ENST00000406854 CDX2Q99626 313 aaPredicted RBP12.52□□□□□ -0.41
PCNX4-203ENST00000406854 PAXXQ9BUH6 204 aa12.52□□□□□ -0.41
PCNX4-203ENST00000406854 RPRMQ9NS64 109 aa12.52□□□□□ -0.41
PCNX4-203ENST00000406854 LCTP09848 1927 aa12.52□□□□□ -0.41
PCNX4-203ENST00000406854 TRAV14DV4A0A0A6YYC5 116 aa12.52□□□□□ -0.41
PCNX4-203ENST00000406854 TIAF1O95411 115 aa12.52□□□□□ -0.41
PCNX4-203ENST00000406854 COX5BP10606 129 aa12.52□□□□□ -0.41
PCNX4-203ENST00000406854 GAS1P54826 345 aa12.52□□□□□ -0.41
PCNX4-203ENST00000406854 CCL8P80075 99 aa12.52□□□□□ -0.41
PCNX4-203ENST00000406854 CA5BP1Q8WTZ4 195 aa12.52□□□□□ -0.41
PCNX4-203ENST00000406854 GALNT14Q96FL9 552 aa12.52□□□□□ -0.41
PCNX4-203ENST00000406854 KCNMB2Q9Y691 235 aa12.52□□□□□ -0.41
PCNX4-203ENST00000406854 PLXNA1Q9UIW2 1896 aa12.51□□□□□ -0.41
PCNX4-203ENST00000406854 WNK2Q9Y3S1 2297 aa12.51□□□□□ -0.41
PCNX4-203ENST00000406854 HIST1H1BP16401 226 aaKnown RBP12.51□□□□□ -0.41
PCNX4-203ENST00000406854 MIC13Q5XKP0 118 aa12.51□□□□□ -0.41
PCNX4-203ENST00000406854 RAB1BQ9H0U4 201 aa12.51□□□□□ -0.41
PCNX4-203ENST00000406854 K7N7A8 449 aa12.51□□□□□ -0.41
PCNX4-203ENST00000406854 GCGP01275 180 aa12.51□□□□□ -0.41
PCNX4-203ENST00000406854 RPLP1P05386 114 aaKnown RBP12.51□□□□□ -0.41
PCNX4-203ENST00000406854 EFNB1P98172 346 aa12.51□□□□□ -0.41
PCNX4-203ENST00000406854 RSPO4Q2I0M5 234 aaPredicted RBP12.51□□□□□ -0.41
PCNX4-203ENST00000406854 ZNF343Q6P1L6 599 aa12.51□□□□□ -0.41
PCNX4-203ENST00000406854 CISD1Q9NZ45 108 aaKnown RBP12.51□□□□□ -0.41
PCNX4-203ENST00000406854 COX6A1P12074 109 aa12.51□□□□□ -0.41
PCNX4-203ENST00000406854 P2RY6Q15077 328 aa12.51□□□□□ -0.41
PCNX4-203ENST00000406854 PQLC2Q6ZP29 291 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms