RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 MRPS14O60783 128 aaKnown RBP3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 SPAG7O75391 227 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 RAB38P57729 211 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 TAS2R43P59537 309 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 PFN3P60673 137 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 RHOBP62745 196 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 CD164Q04900 197 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 PPP1R1AQ13522 171 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 FAM53BQ14153 422 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 SLC25A35Q3KQZ1 300 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 HSD17B12Q53GQ0 312 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 CST9Q5W186 159 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 NANOGP8Q6NSW7 305 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 XKRXQ6PP77 449 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 IGFL2Q6UWQ7 119 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 ZNF767PQ75MW2 155 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 UMODL1-AS1Q8N2C9 162 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 C12orf45Q8N5I9 185 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 ZNF645Q8N7E2 425 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR52E4Q8NGH9 312 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 C1orf54Q8WWF1 131 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 HIST1H2BAQ96A08 127 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 MARVELD1Q9BSK0 173 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 RSPO3Q9BXY4 272 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 MROQ9BYG7 248 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 PLA2G2FQ9BZM2 168 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 DCSTAMPQ9H295 470 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 ENY2Q9NPA8 101 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 IDI2-AS1Q9NZ38 188 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 PRO0628Q9UI54 55 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 TNFSF18Q9UNG2 199 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 TP53TG1Q9Y2A0 90 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 ORC6Q9Y5N6 252 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 TMEM2Q9UHN6 1383 aa3.09□□□□□ -1.92
HMGB1P13-201ENST00000406019 CAMSAP2Q08AD1 1489 aa3.09□□□□□ -1.92
HMGB1P13-201ENST00000406019 KDM5DQ9BY66 1539 aa3.09□□□□□ -1.92
HMGB1P13-201ENST00000406019 DYSFO75923 2080 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 PSME4Q14997 1843 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 A0A096LPI6 279 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 A0A1W2PRE2 83 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 C20orf202A1L168 122 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 H3BSA7 217 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 M0R143 59 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 UPK1AO00322 258 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 GGCTO75223 188 aaKnown RBP3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 ATG12O94817 140 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 TNFSF15O95150 251 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 HLA-DQA1P01909 254 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 CRYGDP07320 174 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 ZNF688P0C7X2 276 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 HIST1H1BP16401 226 aaKnown RBP3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 PVALBP20472 110 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 IL3RAP26951 378 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 GLRXP35754 106 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 DLX6P56179 175 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 RAB25P57735 213 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 PLCXD2Q0VAA5 305 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 SHHQ15465 462 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 HLA-DRB5Q30154 266 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 TMEM97Q5BJF2 176 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 SFXN4Q6P4A7 337 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 GUSBP11Q6P575 273 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 ALKAL1Q6UXT8 129 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 Q6ZSR6 202 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 CTAGE3PQ8IX95 158 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 OSR2Q8N2R0 312 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 LINC00337Q8N6G1 96 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 CYB561D1Q8N8Q1 229 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR8G5Q8NG78 346 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR4X1Q8NH49 305 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 CIRBP-AS1Q8TBR5 109 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 GPR119Q8TDV5 335 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 TMEM159Q96B96 161 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 NEURL3Q96EH8 262 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 DNAJC30Q96LL9 226 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 SPACA5Q96QH8 159 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR52E6Q96RD3 313 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 METTL26Q96S19 204 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 ZNF649Q9BS31 505 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 EXOSC4Q9NPD3 245 aaKnown RBP3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 OPTCQ9UBM4 332 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 VPS29Q9UBQ0 182 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 ZNF230Q9UIE0 474 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 ZFP30Q9Y2G7 519 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 PTPRJQ12913 1337 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 DOCK8Q8NF50 2099 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 NPHP4O75161 1426 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 ARHGEF11O15085 1522 aa3.08□□□□□ -1.92
HMGB1P13-201ENST00000406019 YLPM1P49750 1951 aaKnown RBP3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 IGKV6-21A0A0C4DH24 114 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 ISPDA4D126 451 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 A8MWP6 167 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 F5H5K5 113 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 K7ERU9 68 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 FAAHO00519 579 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 MFNGO00587 321 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 HMGB3O15347 200 aaKnown RBP3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 CDS2O95674 445 aa3.07□□□□□ -1.92
HMGB1P13-201ENST00000406019 IFNA17P01571 189 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms