RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 OR10G9Q8NGN4 311 aa13.11□□□□□ -0.31
ATG4B-205ENST00000404914 OR10G7Q8NGN6 311 aa13.11□□□□□ -0.31
ATG4B-205ENST00000404914 OR1L1Q8NH94 360 aa13.11□□□□□ -0.31
ATG4B-205ENST00000404914 LSM10Q969L4 123 aaKnown RBP13.11□□□□□ -0.31
ATG4B-205ENST00000404914 CLN8Q9UBY8 286 aa13.11□□□□□ -0.31
ATG4B-205ENST00000404914 ZNF391Q9UJN7 358 aa13.11□□□□□ -0.31
ATG4B-205ENST00000404914 KCNS2Q9ULS6 477 aa13.11□□□□□ -0.31
ATG4B-205ENST00000404914 A0A0U1RQK1 487 aa13.1□□□□□ -0.31
ATG4B-205ENST00000404914 ZNF320A2RRD8 509 aa13.1□□□□□ -0.31
ATG4B-205ENST00000404914 TRAPPC2LH3BP13 241 aa13.1□□□□□ -0.31
ATG4B-205ENST00000404914 CTXN2P0C2S0 81 aa13.1□□□□□ -0.31
ATG4B-205ENST00000404914 CCKARP32238 428 aa13.1□□□□□ -0.31
ATG4B-205ENST00000404914 CARD18P57730 90 aa13.1□□□□□ -0.31
ATG4B-205ENST00000404914 COL25A1Q9BXS0 654 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-205ENST00000404914 MARCH11A6NNE9 402 aa13.1□□□□□ -0.31
ATG4B-205ENST00000404914 ZNF705FA8MVS1 300 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-205ENST00000404914 ZNF705DP0CH99 300 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-205ENST00000404914 ZNF705BP0CI00 300 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-205ENST00000404914 SPINK9Q5DT21 86 aa13.1□□□□□ -0.31
ATG4B-205ENST00000404914 GCSAMLQ5JQS6 135 aa13.1□□□□□ -0.31
ATG4B-205ENST00000404914 MRPL14Q6P1L8 145 aaKnown RBP13.1□□□□□ -0.31
ATG4B-205ENST00000404914 TMEM14EPQ6UXP3 125 aa13.1□□□□□ -0.31
ATG4B-205ENST00000404914 TP53TG3Q9ULZ0 132 aa13.1□□□□□ -0.31
ATG4B-205ENST00000404914 CACNA1EQ15878 2313 aa13.1□□□□□ -0.31
ATG4B-205ENST00000404914 IGHV5-10-1A0A0J9YXX1 117 aa13.1□□□□□ -0.31
ATG4B-205ENST00000404914 CTXND1A0A1B0GTU2 59 aa13.1□□□□□ -0.31
ATG4B-205ENST00000404914 RAMP3O60896 148 aa13.1□□□□□ -0.31
ATG4B-205ENST00000404914 RHBDL1O75783 438 aa13.1□□□□□ -0.31
ATG4B-205ENST00000404914 LINC00310P59036 64 aa13.1□□□□□ -0.31
ATG4B-205ENST00000404914 UBE2G2P60604 165 aa13.1□□□□□ -0.31
ATG4B-205ENST00000404914 FFAR4Q5NUL3 377 aa13.1□□□□□ -0.31
ATG4B-205ENST00000404914 COLCA1Q6ZS62 124 aa13.1□□□□□ -0.31
ATG4B-205ENST00000404914 PSMF1Q92530 271 aa13.1□□□□□ -0.31
ATG4B-205ENST00000404914 MS4A10Q96PG2 267 aa13.1□□□□□ -0.31
ATG4B-205ENST00000404914 SF3B5Q9BWJ5 86 aaKnown RBP13.1□□□□□ -0.31
ATG4B-205ENST00000404914 TMEM9BQ9NQ34 198 aa13.1□□□□□ -0.31
ATG4B-205ENST00000404914 TRAPPC1Q9Y5R8 145 aa13.1□□□□□ -0.31
ATG4B-205ENST00000404914 HPRT1P00492 218 aa13.09□□□□□ -0.31
ATG4B-205ENST00000404914 UMODP07911 640 aa13.09□□□□□ -0.31
ATG4B-205ENST00000404914 ATP5G3P48201 142 aa13.09□□□□□ -0.31
ATG4B-205ENST00000404914 GNB1P62873 340 aa13.09□□□□□ -0.31
ATG4B-205ENST00000404914 CCL7P80098 99 aa13.09□□□□□ -0.31
ATG4B-205ENST00000404914 MKXQ8IYA7 352 aa13.09□□□□□ -0.31
ATG4B-205ENST00000404914 ANAPC16Q96DE5 110 aa13.09□□□□□ -0.31
ATG4B-205ENST00000404914 MANBALQ9NQG1 85 aa13.09□□□□□ -0.31
ATG4B-205ENST00000404914 DLL3Q9NYJ7 618 aa13.09□□□□□ -0.31
ATG4B-205ENST00000404914 C19orf25Q9UFG5 118 aaPredicted RBP13.09□□□□□ -0.31
ATG4B-205ENST00000404914 TNRC6BQ9UPQ9 1833 aaKnown RBP13.09□□□□□ -0.31
ATG4B-205ENST00000404914 C5orf49A4QMS7 147 aa13.09□□□□□ -0.31
ATG4B-205ENST00000404914 SELEP16581 610 aa13.09□□□□□ -0.31
ATG4B-205ENST00000404914 CEACAM21Q3KPI0 293 aa13.09□□□□□ -0.31
ATG4B-205ENST00000404914 Q6ZWC4 215 aa13.09□□□□□ -0.31
ATG4B-205ENST00000404914 LINC01551Q86U37 167 aa13.09□□□□□ -0.31
ATG4B-205ENST00000404914 FGFRL1Q8N441 504 aa13.09□□□□□ -0.31
ATG4B-205ENST00000404914 OR10D3Q8NH80 312 aa13.09□□□□□ -0.31
ATG4B-205ENST00000404914 TECTBQ96PL2 329 aa13.09□□□□□ -0.31
ATG4B-205ENST00000404914 DIRC2Q96SL1 478 aa13.09□□□□□ -0.31
ATG4B-205ENST00000404914 IMMP2LQ96T52 175 aa13.09□□□□□ -0.31
ATG4B-205ENST00000404914 PRDM14Q9GZV8 571 aa13.09□□□□□ -0.31
ATG4B-205ENST00000404914 OR51B6Q9H340 312 aa13.09□□□□□ -0.31
ATG4B-205ENST00000404914 TNRC6AQ8NDV7 1962 aaKnown RBP13.09□□□□□ -0.31
ATG4B-205ENST00000404914 IGHV1-45A0A0A0MS14 117 aa13.08□□□□□ -0.32
ATG4B-205ENST00000404914 RBFOX2O43251 390 aaKnown RBP eCLIP13.08□□□□□ -0.324e-7■■□□□ 14.2
ATG4B-205ENST00000404914 DLEU1O43261 78 aa13.08□□□□□ -0.32
ATG4B-205ENST00000404914 ADMP35318 185 aa13.08□□□□□ -0.32
ATG4B-205ENST00000404914 SRP14P37108 136 aaKnown RBP13.08□□□□□ -0.32
ATG4B-205ENST00000404914 DCAF10Q5QP82 559 aa13.08□□□□□ -0.32
ATG4B-205ENST00000404914 TMEM144Q7Z5S9 345 aa13.08□□□□□ -0.32
ATG4B-205ENST00000404914 ZDHHC16Q969W1 377 aa13.08□□□□□ -0.32
ATG4B-205ENST00000404914 NEIL1Q96FI4 390 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-205ENST00000404914 SH2D2AQ9NP31 389 aa13.08□□□□□ -0.32
ATG4B-205ENST00000404914 RBM7Q9Y580 266 aaKnown RBP13.08□□□□□ -0.32
ATG4B-205ENST00000404914 MLNRO43193 412 aa13.08□□□□□ -0.32
ATG4B-205ENST00000404914 MBP02144 154 aa13.08□□□□□ -0.32
ATG4B-205ENST00000404914 WNT2P09544 360 aa13.08□□□□□ -0.32
ATG4B-205ENST00000404914 HNF1AP20823 631 aa13.08□□□□□ -0.32
ATG4B-205ENST00000404914 CDKN1AP38936 164 aa13.08□□□□□ -0.32
ATG4B-205ENST00000404914 WIPI1Q5MNZ9 446 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-205ENST00000404914 R3HDM4Q96D70 268 aa13.08□□□□□ -0.32
ATG4B-205ENST00000404914 IMMP1LQ96LU5 166 aa13.08□□□□□ -0.32
ATG4B-205ENST00000404914 CCDC74BQ96LY2 380 aa13.08□□□□□ -0.32
ATG4B-205ENST00000404914 TMEM204Q9BSN7 226 aa13.08□□□□□ -0.32
ATG4B-205ENST00000404914 PXMP4Q9Y6I8 212 aa13.08□□□□□ -0.32
ATG4B-205ENST00000404914 IGHV3-64DA0A0J9YX35 117 aa13.07□□□□□ -0.32
ATG4B-205ENST00000404914 PMS2P5A8MQ11 134 aa13.07□□□□□ -0.32
ATG4B-205ENST00000404914 C11orf94C9JXX5 98 aa13.07□□□□□ -0.32
ATG4B-205ENST00000404914 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.07□□□□□ -0.32
ATG4B-205ENST00000404914 FRMD6-AS1P0C7T7 363 aa13.07□□□□□ -0.32
ATG4B-205ENST00000404914 S100GP29377 79 aa13.07□□□□□ -0.32
ATG4B-205ENST00000404914 OR3A1P47881 315 aa13.07□□□□□ -0.32
ATG4B-205ENST00000404914 LPAL2Q16609 132 aa13.07□□□□□ -0.32
ATG4B-205ENST00000404914 DRAM1Q8N682 238 aa13.07□□□□□ -0.32
ATG4B-205ENST00000404914 FSCN3Q9NQT6 498 aa13.07□□□□□ -0.32
ATG4B-205ENST00000404914 F2Z2F3 143 aa13.07□□□□□ -0.32
ATG4B-205ENST00000404914 YPEL1O60688 119 aa13.07□□□□□ -0.32
ATG4B-205ENST00000404914 KRASP01116 189 aa13.07□□□□□ -0.32
ATG4B-205ENST00000404914 SFTPCP11686 197 aa13.07□□□□□ -0.32
ATG4B-205ENST00000404914 COX6A1P12074 109 aa13.07□□□□□ -0.32
ATG4B-205ENST00000404914 G6PCP35575 357 aa13.07□□□□□ -0.32
ATG4B-205ENST00000404914 MRPL21Q7Z2W9 205 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms