RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 SMIM15Q7Z3B0 74 aa15.11■□□□□ 0.01
SNED1-204ENST00000401884 OR5P3Q8WZ94 311 aa15.11■□□□□ 0.01
SNED1-204ENST00000401884 CREBBPQ92793 2442 aa15.11■□□□□ 0.01
SNED1-204ENST00000401884 TOMM20LQ6UXN7 152 aa15.11■□□□□ 0.01
SNED1-204ENST00000401884 TMEM167BQ9NRX6 74 aa15.11■□□□□ 0.01
SNED1-204ENST00000401884 IGKV1D-8A0A087WSZ0 117 aa15.11■□□□□ 0.01
SNED1-204ENST00000401884 PRR33A8MZF0 331 aa15.11■□□□□ 0.01
SNED1-204ENST00000401884 HPRT1P00492 218 aa15.11■□□□□ 0.01
SNED1-204ENST00000401884 UBE2L3P68036 154 aaKnown RBP15.11■□□□□ 0.01
SNED1-204ENST00000401884 LOXL4Q96JB6 756 aa15.11■□□□□ 0.01
SNED1-204ENST00000401884 C1QTNF5Q9BXJ0 243 aa15.11■□□□□ 0.01
SNED1-204ENST00000401884 FUT9Q9Y231 359 aa15.11■□□□□ 0.01
SNED1-204ENST00000401884 IGSF23A1L1A6 192 aa15.11■□□□□ 0.01
SNED1-204ENST00000401884 TOX4O94842 621 aa15.11■□□□□ 0.01
SNED1-204ENST00000401884 C9orf152Q5JTZ5 239 aa15.11■□□□□ 0.01
SNED1-204ENST00000401884 OPN3Q9H1Y3 402 aaPredicted RBP15.11■□□□□ 0.01
SNED1-204ENST00000401884 TECRQ9NZ01 308 aaKnown RBP15.11■□□□□ 0.01
SNED1-204ENST00000401884 A0A1W2PN81 502 aa15.1■□□□□ 0.01
SNED1-204ENST00000401884 MPZP25189 248 aa15.1■□□□□ 0.01
SNED1-204ENST00000401884 CCL8P80075 99 aa15.1■□□□□ 0.01
SNED1-204ENST00000401884 PAX5Q02548 391 aa15.1■□□□□ 0.01
SNED1-204ENST00000401884 STPG1Q5TH74 334 aa15.1■□□□□ 0.01
SNED1-204ENST00000401884 TEPPQ6URK8 271 aa15.1■□□□□ 0.01
SNED1-204ENST00000401884 OR2V2Q96R30 315 aa15.1■□□□□ 0.01
SNED1-204ENST00000401884 PRNDQ9UKY0 176 aa15.1■□□□□ 0.01
SNED1-204ENST00000401884 CARHSP1Q9Y2V2 147 aaKnown RBP15.1■□□□□ 0.01
SNED1-204ENST00000401884 HEATR1Q9H583 2144 aaKnown RBP15.1■□□□□ 0.01
SNED1-204ENST00000401884 DIDO1Q9BTC0 2240 aaKnown RBP15.1■□□□□ 0.01
SNED1-204ENST00000401884 PMCHP20382 165 aa15.1■□□□□ 0.01
SNED1-204ENST00000401884 UCP1P25874 307 aa15.1■□□□□ 0.01
SNED1-204ENST00000401884 SCGB2A2Q13296 93 aa15.1■□□□□ 0.01
SNED1-204ENST00000401884 DHRS7BQ6IAN0 325 aaPredicted RBP15.1■□□□□ 0.01
SNED1-204ENST00000401884 DRAM1Q8N682 238 aa15.1■□□□□ 0.01
SNED1-204ENST00000401884 ZNF645Q8N7E2 425 aa15.1■□□□□ 0.01
SNED1-204ENST00000401884 PACRGQ96M98 296 aaPredicted RBP15.1■□□□□ 0.01
SNED1-204ENST00000401884 HARBI1Q96MB7 349 aa15.1■□□□□ 0.01
SNED1-204ENST00000401884 RBKSQ9H477 322 aa15.1■□□□□ 0.01
SNED1-204ENST00000401884 RPRMQ9NS64 109 aa15.1■□□□□ 0.01
SNED1-204ENST00000401884 ABCA4P78363 2273 aa15.1■□□□□ 0.01
SNED1-204ENST00000401884 J3QR06 171 aa15.1■□□□□ 0.01
SNED1-204ENST00000401884 RHBDL1O75783 438 aa15.1■□□□□ 0.01
SNED1-204ENST00000401884 FBP1P09467 338 aa15.1■□□□□ 0.01
SNED1-204ENST00000401884 ORM2P19652 201 aa15.1■□□□□ 0.01
SNED1-204ENST00000401884 TRGC2P03986 189 aa15.09■□□□□ 0.01
SNED1-204ENST00000401884 COX7A1P24310 79 aa15.09■□□□□ 0.01
SNED1-204ENST00000401884 HOXA6P31267 233 aa15.09■□□□□ 0.01
SNED1-204ENST00000401884 TNFRSF9Q07011 255 aa15.09■□□□□ 0.01
SNED1-204ENST00000401884 TCTEX1D1Q8N7M0 179 aa15.09■□□□□ 0.01
SNED1-204ENST00000401884 ACP1P24666 158 aa15.09■□□□□ 0.01
SNED1-204ENST00000401884 RND1Q92730 232 aa15.09■□□□□ 0.01
SNED1-204ENST00000401884 SMIM8Q96KF7 97 aa15.09■□□□□ 0.01
SNED1-204ENST00000401884 PPP1R14DQ9NXH3 145 aa15.09■□□□□ 0.01
SNED1-204ENST00000401884 AHRRA9YTQ3 701 aa15.09■□□□□ 0.01
SNED1-204ENST00000401884 FAM90A26D6RGX4 464 aa15.09■□□□□ 0.01
SNED1-204ENST00000401884 PDE6DO43924 150 aa15.09■□□□□ 0.01
SNED1-204ENST00000401884 SLC25A5P05141 298 aaKnown RBP15.09■□□□□ 0.01
SNED1-204ENST00000401884 HOXB1P14653 301 aaPredicted RBP15.09■□□□□ 0.01
SNED1-204ENST00000401884 HIST1H2BAQ96A08 127 aa15.09■□□□□ 0.01
SNED1-204ENST00000401884 PLSCR2Q9NRY7 297 aa15.09■□□□□ 0.01
SNED1-204ENST00000401884 IL36RNQ9UBH0 155 aa15.09■□□□□ 0.01
SNED1-204ENST00000401884 ODAMA1E959 279 aa15.09■□□□□ 0.01
SNED1-204ENST00000401884 RBP4P02753 201 aa15.09■□□□□ 0.01
SNED1-204ENST00000401884 TIPARPQ7Z3E1 657 aaKnown RBP15.09■□□□□ 0.01
SNED1-204ENST00000401884 PITPNC1Q9UKF7 332 aa15.09■□□□□ 0.01
SNED1-204ENST00000401884 CYB5R3P00387 301 aaPredicted RBP15.08■□□□□ 0.01
SNED1-204ENST00000401884 GLIPR1P48060 266 aa15.08■□□□□ 0.01
SNED1-204ENST00000401884 RPL31P62899 125 aaKnown RBP15.08■□□□□ 0.01
SNED1-204ENST00000401884 NRN1LQ496H8 165 aa15.08■□□□□ 0.01
SNED1-204ENST00000401884 BIVMQ86UB2 503 aa15.08■□□□□ 0.01
SNED1-204ENST00000401884 ZIC4Q8N9L1 334 aa15.08■□□□□ 0.01
SNED1-204ENST00000401884 BLNKQ8WV28 456 aa15.08■□□□□ 0.01
SNED1-204ENST00000401884 LSM10Q969L4 123 aaKnown RBP15.08■□□□□ 0.01
SNED1-204ENST00000401884 NPVFQ9HCQ7 196 aa15.08■□□□□ 0.01
SNED1-204ENST00000401884 DBX1A6NMT0 343 aa15.08■□□□□ 0
SNED1-204ENST00000401884 RAB29O14966 203 aa15.08■□□□□ 0
SNED1-204ENST00000401884 GYPAP02724 150 aa15.08■□□□□ 0
SNED1-204ENST00000401884 FAM157CP0CG43 387 aa15.08■□□□□ 0
SNED1-204ENST00000401884 C1orf174Q8IYL3 243 aa15.08■□□□□ 0
SNED1-204ENST00000401884 GINS3Q9BRX5 216 aa15.08■□□□□ 0
SNED1-204ENST00000401884 GNB4Q9HAV0 340 aa15.08■□□□□ 0
SNED1-204ENST00000401884 ZNF716A6NP11 495 aa15.08■□□□□ 0
SNED1-204ENST00000401884 FTH1P19P0C7X4 201 aa15.08■□□□□ 0
SNED1-204ENST00000401884 CRISP2P16562 243 aa15.08■□□□□ 0
SNED1-204ENST00000401884 TCL1AP56279 114 aa15.08■□□□□ 0
SNED1-204ENST00000401884 ETFRF1Q6IPR1 90 aa15.08■□□□□ 0
SNED1-204ENST00000401884 LINC00518Q8N0U6 118 aa15.08■□□□□ 0
SNED1-204ENST00000401884 RAB24Q969Q5 203 aa15.08■□□□□ 0
SNED1-204ENST00000401884 USB1Q9BQ65 265 aaKnown RBP15.08■□□□□ 0
SNED1-204ENST00000401884 TIMM9Q9Y5J7 89 aa15.08■□□□□ 0
SNED1-204ENST00000401884 MED13LQ71F56 2210 aa15.08■□□□□ 0
SNED1-204ENST00000401884 LOC105371267A0A1B0GV96 52 aa15.07■□□□□ 0
SNED1-204ENST00000401884 PTBP3O95758 552 aaKnown RBP15.07■□□□□ 0
SNED1-204ENST00000401884 SP9P0CG40 484 aa15.07■□□□□ 0
SNED1-204ENST00000401884 SUMO1P63165 101 aaKnown RBP15.07■□□□□ 0
SNED1-204ENST00000401884 AARDQ4LEZ3 155 aa15.07■□□□□ 0
SNED1-204ENST00000401884 RNF144BQ7Z419 303 aa15.07■□□□□ 0
SNED1-204ENST00000401884 ITLN1Q8WWA0 313 aa15.07■□□□□ 0
SNED1-204ENST00000401884 PLXNA4Q9HCM2 1894 aa15.07■□□□□ 0
SNED1-204ENST00000401884 DNASE2O00115 360 aaPredicted RBP15.07■□□□□ 0
SNED1-204ENST00000401884 GATCO43716 136 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms