RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 POM121L2Q96KW2 1035 aa17.67■□□□□ 0.42
CTCF-202ENST00000401394 WNT9BO14905 357 aa17.66■□□□□ 0.42
CTCF-202ENST00000401394 RBMXL2O75526 392 aaKnown RBP17.66■□□□□ 0.42
CTCF-202ENST00000401394 GYPAP02724 150 aa17.66■□□□□ 0.42
CTCF-202ENST00000401394 C1QTNF9P0C862 333 aa17.66■□□□□ 0.42
CTCF-202ENST00000401394 FGF7P21781 194 aa17.66■□□□□ 0.42
CTCF-202ENST00000401394 ATP5G3P48201 142 aa17.66■□□□□ 0.42
CTCF-202ENST00000401394 Q6P435 159 aa17.66■□□□□ 0.42
CTCF-202ENST00000401394 CYP2G1PQ6ZSU1 146 aa17.66■□□□□ 0.42
CTCF-202ENST00000401394 ZNF826PQ6ZT77 177 aa17.66■□□□□ 0.42
CTCF-202ENST00000401394 MPLP40238 635 aa17.66■□□□□ 0.42
CTCF-202ENST00000401394 BRWD1-AS2P59051 145 aa17.66■□□□□ 0.42
CTCF-202ENST00000401394 HBG1P69891 147 aa17.66■□□□□ 0.42
CTCF-202ENST00000401394 HBG2P69892 147 aa17.66■□□□□ 0.42
CTCF-202ENST00000401394 TDRG1Q3Y452 100 aa17.66■□□□□ 0.42
CTCF-202ENST00000401394 TIPARPQ7Z3E1 657 aaKnown RBP17.66■□□□□ 0.42
CTCF-202ENST00000401394 RFESDQ8TAC1 157 aa17.66■□□□□ 0.42
CTCF-202ENST00000401394 KCNE4Q8WWG9 221 aa17.66■□□□□ 0.42
CTCF-202ENST00000401394 IL22RA2Q969J5 263 aa17.66■□□□□ 0.42
CTCF-202ENST00000401394 GRIFINA4D1Z8 144 aa17.65■□□□□ 0.42
CTCF-202ENST00000401394 S1PR2O95136 353 aa17.65■□□□□ 0.42
CTCF-202ENST00000401394 GRPP07492 148 aa17.65■□□□□ 0.42
CTCF-202ENST00000401394 FRMD6-AS1P0C7T7 363 aa17.65■□□□□ 0.42
CTCF-202ENST00000401394 TCEAL6Q6IPX3 200 aa17.65■□□□□ 0.42
CTCF-202ENST00000401394 APOBEC3DQ96AK3 386 aaPredicted RBP17.65■□□□□ 0.42
CTCF-202ENST00000401394 SDSLQ96GA7 329 aa17.65■□□□□ 0.42
CTCF-202ENST00000401394 DDA1Q9BW61 102 aa17.65■□□□□ 0.42
CTCF-202ENST00000401394 PCED1AQ9H1Q7 454 aa17.65■□□□□ 0.42
CTCF-202ENST00000401394 C17orf98A8MV24 154 aa17.65■□□□□ 0.42
CTCF-202ENST00000401394 CTXN2P0C2S0 81 aa17.65■□□□□ 0.42
CTCF-202ENST00000401394 OR5A2Q8NGI9 324 aa17.65■□□□□ 0.42
CTCF-202ENST00000401394 PSPNO60542 156 aa17.64■□□□□ 0.42
CTCF-202ENST00000401394 TNFRSF9Q07011 255 aa17.64■□□□□ 0.42
CTCF-202ENST00000401394 Q3ZCU0 254 aa17.64■□□□□ 0.42
CTCF-202ENST00000401394 OR2D2Q9H210 308 aa17.64■□□□□ 0.42
CTCF-202ENST00000401394 TNRC18O15417 2968 aaPredicted RBP17.64■□□□□ 0.41
CTCF-202ENST00000401394 S100GP29377 79 aa17.64■□□□□ 0.41
CTCF-202ENST00000401394 CYB561P49447 251 aa17.64■□□□□ 0.41
CTCF-202ENST00000401394 TGFBR3Q03167 851 aa17.64■□□□□ 0.41
CTCF-202ENST00000401394 MCEMP1Q8IX19 187 aa17.64■□□□□ 0.41
CTCF-202ENST00000401394 PSMG3Q9BT73 122 aaPredicted RBP17.64■□□□□ 0.41
CTCF-202ENST00000401394 PATZ1Q9HBE1 687 aaKnown RBP17.64■□□□□ 0.41
CTCF-202ENST00000401394 FAM90A10PA6NDY2 464 aa17.64■□□□□ 0.41
CTCF-202ENST00000401394 FAM90A18PA6NE21 464 aa17.64■□□□□ 0.41
CTCF-202ENST00000401394 FAM90A16PA6NEW6 464 aa17.64■□□□□ 0.41
CTCF-202ENST00000401394 FAM90A20PA6NIJ5 464 aa17.64■□□□□ 0.41
CTCF-202ENST00000401394 FAM90A8PA6NJQ4 464 aa17.64■□□□□ 0.41
CTCF-202ENST00000401394 FAM90A7PA6NKC0 464 aa17.64■□□□□ 0.41
CTCF-202ENST00000401394 FAM90A22PA8MWA6 464 aa17.64■□□□□ 0.41
CTCF-202ENST00000401394 FAM90A12PA8MX19 464 aa17.64■□□□□ 0.41
CTCF-202ENST00000401394 FAM90A5PA8MXJ8 464 aa17.64■□□□□ 0.41
CTCF-202ENST00000401394 FAM90A23PA8MXZ1 464 aa17.64■□□□□ 0.41
CTCF-202ENST00000401394 FAM90A15PP0C7V4 464 aa17.64■□□□□ 0.41
CTCF-202ENST00000401394 FAM90A13PP0C7W8 464 aa17.64■□□□□ 0.41
CTCF-202ENST00000401394 FAM90A14PP0C7W9 464 aa17.64■□□□□ 0.41
CTCF-202ENST00000401394 FAM90A24PP0C7X0 464 aa17.64■□□□□ 0.41
CTCF-202ENST00000401394 IL11RAQ14626 422 aa17.64■□□□□ 0.41
CTCF-202ENST00000401394 CST9LP1Q5W188 147 aa17.64■□□□□ 0.41
CTCF-202ENST00000401394 LINC00696Q6ZRV3 163 aa17.64■□□□□ 0.41
CTCF-202ENST00000401394 OR5B12Q96R08 314 aa17.64■□□□□ 0.41
CTCF-202ENST00000401394 ODAMA1E959 279 aa17.63■□□□□ 0.41
CTCF-202ENST00000401394 ANKRD30BLA7E2S9 258 aa17.63■□□□□ 0.41
CTCF-202ENST00000401394 OR3A1P47881 315 aa17.63■□□□□ 0.41
CTCF-202ENST00000401394 ZNF124Q15973 351 aa17.63■□□□□ 0.41
CTCF-202ENST00000401394 OR5R1Q8NH85 324 aa17.63■□□□□ 0.41
CTCF-202ENST00000401394 DCTN5Q9BTE1 182 aa17.63■□□□□ 0.41
CTCF-202ENST00000401394 HIPK2Q9H2X6 1198 aa17.63■□□□□ 0.41
CTCF-202ENST00000401394 MRPS17Q9Y2R5 130 aaKnown RBP17.63■□□□□ 0.41
CTCF-202ENST00000401394 RP1L1Q8IWN7 2480 aaPredicted RBP17.63■□□□□ 0.41
CTCF-202ENST00000401394 PSMB3P49720 205 aa17.63■□□□□ 0.41
CTCF-202ENST00000401394 SERF2P84101 59 aa17.63■□□□□ 0.41
CTCF-202ENST00000401394 LURAP1Q96LR2 239 aa17.63■□□□□ 0.41
CTCF-202ENST00000401394 TECTBQ96PL2 329 aa17.63■□□□□ 0.41
CTCF-202ENST00000401394 IMMP2LQ96T52 175 aa17.63■□□□□ 0.41
CTCF-202ENST00000401394 FAM234AQ9H0X4 552 aa17.63■□□□□ 0.41
CTCF-202ENST00000401394 OR51I2Q9H344 312 aa17.63■□□□□ 0.41
CTCF-202ENST00000401394 CADP27708 2225 aa17.62■□□□□ 0.41
CTCF-202ENST00000401394 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.62■□□□□ 0.41
CTCF-202ENST00000401394 TCAPO15273 167 aa17.62■□□□□ 0.41
CTCF-202ENST00000401394 SCGB1D1O95968 90 aa17.62■□□□□ 0.41
CTCF-202ENST00000401394 GCH1P30793 250 aa17.62■□□□□ 0.41
CTCF-202ENST00000401394 THBS3P49746 956 aa17.62■□□□□ 0.41
CTCF-202ENST00000401394 AESQ08117 197 aa17.62■□□□□ 0.41
CTCF-202ENST00000401394 SNHG12Q9BXW3 62 aa17.62■□□□□ 0.41
CTCF-202ENST00000401394 DVL1O14640 695 aa17.62■□□□□ 0.41
CTCF-202ENST00000401394 PDGFBP01127 241 aaPredicted RBP17.62■□□□□ 0.41
CTCF-202ENST00000401394 LHX2P50458 406 aa17.62■□□□□ 0.41
CTCF-202ENST00000401394 PAX5Q02548 391 aa17.62■□□□□ 0.41
CTCF-202ENST00000401394 P2RX4Q99571 388 aa17.62■□□□□ 0.41
CTCF-202ENST00000401394 NDUFB4O95168 129 aa17.61■□□□□ 0.41
CTCF-202ENST00000401394 EDDM3BP56851 147 aa17.61■□□□□ 0.41
CTCF-202ENST00000401394 SSTP61278 116 aa17.61■□□□□ 0.41
CTCF-202ENST00000401394 TMEM14EPQ6UXP3 125 aa17.61■□□□□ 0.41
CTCF-202ENST00000401394 Q6ZR03 302 aa17.61■□□□□ 0.41
CTCF-202ENST00000401394 SCCPDHQ8NBX0 429 aa17.61■□□□□ 0.41
CTCF-202ENST00000401394 OR2T10Q8NGZ9 312 aa17.61■□□□□ 0.41
CTCF-202ENST00000401394 PYGO2Q9BRQ0 406 aa17.61■□□□□ 0.41
CTCF-202ENST00000401394 HRASP01112 189 aa17.61■□□□□ 0.41
CTCF-202ENST00000401394 IL3RAP26951 378 aa17.61■□□□□ 0.41
CTCF-202ENST00000401394 GNG3P63215 75 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms