RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 STRADBQ9C0K7 418 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 CCL28Q9NRJ3 127 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 MED29Q9NX70 200 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 B4GALT7Q9UBV7 327 aa8.62□□□□□ -1.03
PTPRM-203ENST00000400060 C17orf51A8MQB3 221 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 G3V3Y1 287 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 HSPB6O14558 160 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 RAMP3O60896 148 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 RTP5Q14D33 572 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 MRGPRX1Q96LB2 322 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 C1QTNF9BB2RNN3 333 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 DHHO43323 396 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 UCP1P25874 307 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 CDPF1Q6NVV7 123 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 SPSB3Q6PJ21 355 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 PAQR4Q8N4S7 273 aaPredicted RBP8.61□□□□□ -1.03
PTPRM-203ENST00000400060 LINC01555Q8NAE3 123 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 OR1N2Q8NGR9 330 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 OR1F12Q8NHA8 337 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 SLC25A40Q8TBP6 338 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 C6orf106Q9H6K1 298 aaPredicted RBP8.61□□□□□ -1.03
PTPRM-203ENST00000400060 OSTCQ9NRP0 149 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 XIRP1Q702N8 1843 aaKnown RBP8.61□□□□□ -1.03
PTPRM-203ENST00000400060 A0A1W2PPV9 198 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 GPX1P07203 203 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 PSG6Q00889 435 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 AAED1Q7RTV5 226 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 ATOH7Q8N100 152 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 RNASE8Q8TDE3 154 aaKnown RBP8.61□□□□□ -1.03
PTPRM-203ENST00000400060 RABAC1Q9UI14 185 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 SERTM2A0A1B0GWG4 89 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 TMEM30CPA0ZSE6 113 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 SLC25A17O43808 307 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 SP1P08047 785 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 ZNF525Q8N782 197 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 COX14Q96I36 57 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 EMC6Q9BV81 110 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 GPR27Q9NS67 375 aa8.61□□□□□ -1.03
PTPRM-203ENST00000400060 HS3ST1O14792 307 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 CCL25O15444 150 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 NEURL1O76050 574 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 CTHRC1Q96CG8 243 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 PYGO2Q9BRQ0 406 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 ANAPC10Q9UM13 185 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 SUPT4H1P63272 117 aaKnown RBP8.6□□□□□ -1.03
PTPRM-203ENST00000400060 MLF2Q15773 248 aaPredicted RBP8.6□□□□□ -1.03
PTPRM-203ENST00000400060 PQLC2Q6ZP29 291 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 POM121L2Q96KW2 1035 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 GNG12Q9UBI6 72 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 H3BRM9 83 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 ACTL6BO94805 426 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 LYPD3O95274 346 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 NGFRP08138 427 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 RBM11P57052 281 aaKnown RBP8.6□□□□□ -1.03
PTPRM-203ENST00000400060 DUSP2Q05923 314 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 HES1Q14469 280 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 PSG5Q15238 335 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 TMEM108Q6UXF1 575 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 UNQ6494/PRO21346Q6UXR6 183 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 NYNRINQ9P2P1 1898 aaKnown RBP8.6□□□□□ -1.03
PTPRM-203ENST00000400060 A0A1B0GW15 77 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 PIAS2O75928 621 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 YPEL3P61236 119 aaPredicted RBP8.6□□□□□ -1.03
PTPRM-203ENST00000400060 ERHP84090 104 aaKnown RBP8.6□□□□□ -1.03
PTPRM-203ENST00000400060 HGFACQ04756 655 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 TEPPQ6URK8 271 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 OR4P4Q8NGL7 312 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 AMELYQ99218 206 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 FNDC4Q9H6D8 234 aaPredicted RBP8.6□□□□□ -1.03
PTPRM-203ENST00000400060 DUSP13Q9UII6 198 aa8.6□□□□□ -1.03
PTPRM-203ENST00000400060 MYO16Q9Y6X6 1858 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 PSG2P11465 335 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 NUMA1Q14980 2115 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 FAM89BQ8N5H3 189 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 OR1B1Q8NGR6 318 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 OR4C3Q8NH37 302 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 TMEM190Q8WZ59 177 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 S1PR3Q99500 378 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 PARP14Q460N5 1801 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 GON4LQ3T8J9 2241 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 NCBP2LA6PVI3 153 aaKnown RBP8.59□□□□□ -1.03
PTPRM-203ENST00000400060 ATP5IP56385 69 aaPredicted RBP8.59□□□□□ -1.03
PTPRM-203ENST00000400060 DCAF12Q5T6F0 453 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 FHL5Q5TD97 284 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 VN1R4Q7Z5H5 301 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 RAB37Q96AX2 223 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 COL11A2P13942 1736 aaPredicted RBP8.59□□□□□ -1.03
PTPRM-203ENST00000400060 FAM181BA6NEQ2 426 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 C9JCJ5 164 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 IL18BPO95998 194 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 GCSHP23434 173 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 ID3Q02535 119 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 ZNF816Q0VGE8 651 aaPredicted RBP8.59□□□□□ -1.03
PTPRM-203ENST00000400060 ZFAND6Q6FIF0 208 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 ATP5L2Q7Z4Y8 100 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 UBE2ZQ9H832 354 aaPredicted RBP8.59□□□□□ -1.03
PTPRM-203ENST00000400060 M0QZ24 198 aa8.59□□□□□ -1.03
PTPRM-203ENST00000400060 PGLYRP1O75594 196 aaPredicted RBP8.59□□□□□ -1.03
PTPRM-203ENST00000400060 SLC25A5P05141 298 aaKnown RBP8.59□□□□□ -1.03
PTPRM-203ENST00000400060 HBBP68871 147 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms