RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 SLC17A3O00476 420 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 ZNF189O75820 626 aaPredicted RBP1.13□□□□□ -2.23
CD47-203ENST00000398258 LY6HO94772 140 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 KRT75O95678 551 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 CCL3P10147 92 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 ESDP10768 282 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 CBR1P16152 277 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 LPAR6P43657 344 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 CXCR4P61073 352 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 TPM4P67936 248 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 DEFA6Q01524 100 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 SS18Q15532 418 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 RASL11AQ6T310 242 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 OR2D3Q8NGH3 330 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 ERMNQ8TAM6 284 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 PHOSPHO2Q8TCD6 241 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 HAVCR2Q8TDQ0 301 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 DDI1Q8WTU0 396 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 Q8WTZ3 238 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 CYGBQ8WWM9 190 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 TMBIM1Q969X1 311 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 MS4A6EQ96DS6 147 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 STACQ99469 402 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 MND1Q9BWT6 205 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 NSRP1Q9H0G5 558 aaKnown RBP1.13□□□□□ -2.23
CD47-203ENST00000398258 FAM206AQ9NX38 181 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 NLRC5Q86WI3 1866 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 ADGRB3O60242 1522 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 LCTP09848 1927 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 ABCC11Q96J66 1382 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 IGHV3-73A0A0B4J1V6 119 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 MUC21A0A0G2JKD1 596 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 MUC21A0A140T8X8 626 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 GRIFINA4D1Z8 144 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 KNCNA6PVL3 124 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 LY6LH3BQJ8 138 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 MRASO14807 208 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 NDUFB2O95178 105 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 MT-CO2P00403 227 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 SOD1P00441 154 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 HLA-DRAP01903 254 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 COX5BP10606 129 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 SLC25A16P16260 332 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 UGT2B7P16662 529 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 ZNF7P17097 686 aaPredicted RBP1.12□□□□□ -2.23
CD47-203ENST00000398258 CXCL2P19875 107 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 CXCL3P19876 107 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 GZMHP20718 246 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 CSRP1P21291 193 aaKnown RBP1.12□□□□□ -2.23
CD47-203ENST00000398258 CRYBB3P26998 211 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 PPP1CCP36873 323 aaKnown RBP1.12□□□□□ -2.23
CD47-203ENST00000398258 CA7P43166 264 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 RWDD2BP57060 319 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 TAS2R45P59539 299 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 HPCAP84074 193 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 TMEM176BQ3YBM2 270 aaPredicted RBP1.12□□□□□ -2.23
CD47-203ENST00000398258 ATP5L2Q7Z4Y8 100 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 CCDC112Q8NEF3 446 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 OR10A6Q8NH74 314 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 HES4Q9HCC6 221 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 TXNL4BQ9NX01 149 aaKnown RBP1.12□□□□□ -2.23
CD47-203ENST00000398258 TAS2R9Q9NYW1 312 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 EMC3Q9P0I2 261 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 VWDEQ8N2E2 1590 aa1.12□□□□□ -2.23
CD47-203ENST00000398258 ADAMTS7Q9UKP4 1686 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 H3BPC8 53 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 M0R381 172 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 CRTAPO75718 401 aaPredicted RBP1.11□□□□□ -2.23
CD47-203ENST00000398258 S1PR2O95136 353 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 PSMG1O95456 288 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 IL6P05231 212 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 GZMBP10144 247 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 CPMP14384 443 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 CRHBPP24387 322 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 DDTP30046 118 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 MAGEA2P43356 314 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 FKBP1AP62942 108 aaKnown RBP1.11□□□□□ -2.23
CD47-203ENST00000398258 HOXC5Q00444 222 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 MLLT11Q13015 90 aaPredicted RBP1.11□□□□□ -2.23
CD47-203ENST00000398258 COTL1Q14019 142 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 LGALS9BQ3B8N2 356 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.11□□□□□ -2.23
CD47-203ENST00000398258 LGALS9CQ6DKI2 356 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 TNFAIP8L2Q6P589 184 aaPredicted RBP1.11□□□□□ -2.23
CD47-203ENST00000398258 IQCF2Q8IXL9 164 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 OR5C1Q8NGR4 320 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 JOSD2Q8TAC2 188 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 C16orf78Q8WTQ4 265 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 DNAJC30Q96LL9 226 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 TIPINQ9BVW5 301 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 DERL2Q9GZP9 239 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 LRRC19Q9H756 370 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 NKIRAS1Q9NYS0 192 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 SNX12Q9UMY4 172 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 HDGFL3Q9Y3E1 203 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 PCYT1BQ9Y5K3 369 aaPredicted RBP1.11□□□□□ -2.23
CD47-203ENST00000398258 FAM215AQ9Y5M1 114 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 COL4A2P08572 1712 aa1.11□□□□□ -2.23
CD47-203ENST00000398258 OTOFQ9HC10 1997 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 CHD2O14647 1828 aaKnown RBP1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms