RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 TRAV30A0A087WSZ9 112 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 TRAV1-1A0A0B4J248 108 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 C5orf49A4QMS7 147 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 RNF212BA8MTL3 300 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 SERPINE3A8MV23 424 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 ZNF732B4DXR9 585 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 HS3ST1O14792 307 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 YPEL1O60688 119 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 WDR1O75083 606 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 IFNA1P01562 189 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 TYMSP04818 313 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 CCL1P22362 96 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 HOXA4Q00056 320 aaPredicted RBP4.29□□□□□ -1.72
SSR1-202ENST00000397511 TLE1Q04724 770 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 TDRG1Q3Y452 100 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 OCIAD2Q56VL3 154 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 SPATA46Q5T0L3 261 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 KCNIP4Q6PIL6 250 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 Q6ZN92 141 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 LGI3Q8N145 548 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 ZNF611Q8N823 705 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 ZNF709Q8N972 641 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 OR1F12Q8NHA8 337 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 VN1R17PQ8TDU5 208 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 SSC4DQ8WTU2 575 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 IL1F10Q8WWZ1 152 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 NAT6Q93015 286 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 RPUSD4Q96CM3 377 aaKnown RBP4.29□□□□□ -1.72
SSR1-202ENST00000397511 BOD1Q96IK1 185 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 Q96M66 194 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 YPEL2Q96QA6 119 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 FOXB1Q99853 325 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 SMIM7Q9BQ49 75 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 HIPK2Q9H2X6 1198 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 BET1LQ9NYM9 111 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 PILRBQ9UKJ0 227 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 SLC45A2Q9UMX9 530 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 RNF24Q9Y225 148 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 PPIAL4AQ9Y536 164 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 CST7O76096 145 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 NGFP01138 241 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 SRP14P37108 136 aaKnown RBP4.29□□□□□ -1.72
SSR1-202ENST00000397511 RPS20P60866 119 aaKnown RBP4.29□□□□□ -1.72
SSR1-202ENST00000397511 SUMO1P63165 101 aaKnown RBP4.29□□□□□ -1.72
SSR1-202ENST00000397511 ARL6IP1Q15041 203 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 CLEC12BQ2HXU8 276 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 MORN2Q502X0 79 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 LDLRAD2Q5SZI1 272 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 FAM27BQ5VT28 67 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 Q6ZPA2 131 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 CYP2G1PQ6ZSU1 146 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 OSR2Q8N2R0 312 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 TMEM256Q8N2U0 113 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 OR2Y1Q8NGV0 311 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 APH1AQ96BI3 265 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 TRAPPC1Q9Y5R8 145 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 DOCK11Q5JSL3 2073 aa4.29□□□□□ -1.72
SSR1-202ENST00000397511 IGLV3-32A0A0A0MS00 114 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 IGHV2OR16-5A0A0B4J2B6 119 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 ZNF320A2RRD8 509 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 FAM24AA6NFZ4 105 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 CEBPZOSA8MTT3 80 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 K7ERU9 68 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 SYNGR3O43761 229 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 SCTP09683 121 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 AADACP22760 399 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 TNFSF4P23510 183 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 PLA2G5P39877 138 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 VAMP3Q15836 100 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 PMS2CLQ68D20 193 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 ZNF787Q6DD87 383 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 MCEMP1Q8IX19 187 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 RDH5Q92781 318 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 TMEM54Q969K7 222 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 CST9LQ9H4G1 147 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 ZNF430Q9H8G1 570 aaPredicted RBP4.28□□□□□ -1.72
SSR1-202ENST00000397511 PLEKHF2Q9H8W4 249 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 TMEM38BQ9NVV0 291 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 NECAP2Q9NVZ3 263 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 ZNF503-AS2A6NEH8 195 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 FOXI3A8MTJ6 420 aaPredicted RBP4.28□□□□□ -1.72
SSR1-202ENST00000397511 MRPL33O75394 65 aaKnown RBP4.28□□□□□ -1.72
SSR1-202ENST00000397511 VAMP5O95183 116 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 BCL3P20749 454 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 FGF8P55075 233 aaPredicted RBP4.28□□□□□ -1.72
SSR1-202ENST00000397511 RAC3P60763 192 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 LCN2P80188 198 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 ADIPOQQ15848 244 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 C10orf128Q5T292 105 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 UNQ5815/PRO19632Q6UWF5 114 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 Q6ZWC4 215 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 GGNQ86UU5 652 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 TUSC5Q8IXB3 177 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 RNF138Q8WVD3 245 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 HSPB9Q9BQS6 159 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 AGMATQ9BSE5 352 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 PRRG4Q9BZD6 226 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 PATZ1Q9HBE1 687 aaKnown RBP4.28□□□□□ -1.72
SSR1-202ENST00000397511 MANBALQ9NQG1 85 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 SLC7A10Q9NS82 523 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms