RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 TP53RKQ96S44 253 aa17.27■□□□□ 0.35
CPNE1-204ENST00000397443 HIF1ANQ9NWT6 349 aa17.27■□□□□ 0.35
CPNE1-204ENST00000397443 FLNAP21333 2647 aaKnown RBP17.26■□□□□ 0.35
CPNE1-204ENST00000397443 C3orf85A0A1B0GTC6 90 aa17.26■□□□□ 0.35
CPNE1-204ENST00000397443 ITGB1BP1O14713 200 aa17.26■□□□□ 0.35
CPNE1-204ENST00000397443 IFNA2P01563 188 aa17.26■□□□□ 0.35
CPNE1-204ENST00000397443 REG1BP48304 166 aa17.26■□□□□ 0.35
CPNE1-204ENST00000397443 RND3P61587 244 aa17.26■□□□□ 0.35
CPNE1-204ENST00000397443 LY6G6FQ5SQ64 297 aa17.26■□□□□ 0.35
CPNE1-204ENST00000397443 FOXC2Q99958 501 aa17.26■□□□□ 0.35
CPNE1-204ENST00000397443 MED28Q9H204 178 aa17.26■□□□□ 0.35
CPNE1-204ENST00000397443 KCNIP3Q9Y2W7 256 aa17.26■□□□□ 0.35
CPNE1-204ENST00000397443 SNRPGP15A8MWD9 76 aa17.25■□□□□ 0.35
CPNE1-204ENST00000397443 SLC22A5O76082 557 aa17.25■□□□□ 0.35
CPNE1-204ENST00000397443 MMP9P14780 707 aa17.25■□□□□ 0.35
CPNE1-204ENST00000397443 RPL30P62888 115 aaKnown RBP17.25■□□□□ 0.35
CPNE1-204ENST00000397443 DIAPH2-AS1Q14236 149 aa17.25■□□□□ 0.35
CPNE1-204ENST00000397443 ANKRD55Q3KP44 614 aa17.25■□□□□ 0.35
CPNE1-204ENST00000397443 C1orf122Q6ZSJ8 110 aa17.25■□□□□ 0.35
CPNE1-204ENST00000397443 LINC01356Q8N9X3 169 aa17.25■□□□□ 0.35
CPNE1-204ENST00000397443 TCTEX1D2Q8WW35 142 aa17.25■□□□□ 0.35
CPNE1-204ENST00000397443 MSI2Q96DH6 328 aaKnown RBP17.25■□□□□ 0.35
CPNE1-204ENST00000397443 RBMXL1Q96E39 390 aaKnown RBP17.25■□□□□ 0.35
CPNE1-204ENST00000397443 TBX15Q96SF7 602 aa17.25■□□□□ 0.35
CPNE1-204ENST00000397443 HEXA-AS1Q9H8Q6 139 aa17.25■□□□□ 0.35
CPNE1-204ENST00000397443 PIPOXQ9P0Z9 390 aa17.25■□□□□ 0.35
CPNE1-204ENST00000397443 CELSR1Q9NYQ6 3014 aa17.25■□□□□ 0.35
CPNE1-204ENST00000397443 SMAD7O15105 426 aaKnown RBP17.25■□□□□ 0.35
CPNE1-204ENST00000397443 ARG1P05089 322 aa17.25■□□□□ 0.35
CPNE1-204ENST00000397443 HOXB4P17483 251 aaPredicted RBP17.25■□□□□ 0.35
CPNE1-204ENST00000397443 CD34P28906 385 aa17.25■□□□□ 0.35
CPNE1-204ENST00000397443 PRRX1P54821 245 aa17.25■□□□□ 0.35
CPNE1-204ENST00000397443 CIARTQ8N365 385 aaPredicted RBP17.25■□□□□ 0.35
CPNE1-204ENST00000397443 C12orf45Q8N5I9 185 aaPredicted RBP17.25■□□□□ 0.35
CPNE1-204ENST00000397443 TNFRSF14Q92956 283 aa17.25■□□□□ 0.35
CPNE1-204ENST00000397443 LHX4Q969G2 390 aa17.25■□□□□ 0.35
CPNE1-204ENST00000397443 ABCA1O95477 2261 aa17.25■□□□□ 0.35
CPNE1-204ENST00000397443 LINC00473A8K010 186 aa17.24■□□□□ 0.35
CPNE1-204ENST00000397443 RNASEK-C17orf49H0YIS7 233 aa17.24■□□□□ 0.35
CPNE1-204ENST00000397443 DUS4LO95620 317 aaKnown RBP17.24■□□□□ 0.35
CPNE1-204ENST00000397443 TGFAP01135 160 aa17.24■□□□□ 0.35
CPNE1-204ENST00000397443 F2RP25116 425 aa17.24■□□□□ 0.35
CPNE1-204ENST00000397443 TMEM249Q2WGJ8 235 aa17.24■□□□□ 0.35
CPNE1-204ENST00000397443 HCP5Q6MZN7 132 aa17.24■□□□□ 0.35
CPNE1-204ENST00000397443 ZBTB34Q8NCN2 500 aa17.24■□□□□ 0.35
CPNE1-204ENST00000397443 TMEM186Q96B77 213 aa17.24■□□□□ 0.35
CPNE1-204ENST00000397443 DMRTB1Q96MA1 342 aa17.24■□□□□ 0.35
CPNE1-204ENST00000397443 AKAP9Q99996 3911 aa17.24■□□□□ 0.35
CPNE1-204ENST00000397443 CSPG4Q6UVK1 2322 aa17.23■□□□□ 0.35
CPNE1-204ENST00000397443 ANXA3P12429 323 aa17.23■□□□□ 0.35
CPNE1-204ENST00000397443 RRAS2P62070 204 aaPredicted RBP17.23■□□□□ 0.35
CPNE1-204ENST00000397443 FCN2Q15485 313 aa17.23■□□□□ 0.35
CPNE1-204ENST00000397443 HLA-DRB5Q30154 266 aa17.23■□□□□ 0.35
CPNE1-204ENST00000397443 C11orf88Q6PI97 169 aa17.23■□□□□ 0.35
CPNE1-204ENST00000397443 S1PR3Q99500 378 aa17.23■□□□□ 0.35
CPNE1-204ENST00000397443 PHB2Q99623 299 aa17.23■□□□□ 0.35
CPNE1-204ENST00000397443 ZNF251Q9BRH9 671 aa17.23■□□□□ 0.35
CPNE1-204ENST00000397443 A8MV72 311 aaPredicted RBP17.23■□□□□ 0.35
CPNE1-204ENST00000397443 IGLV1-47P01700 117 aa17.23■□□□□ 0.35
CPNE1-204ENST00000397443 PAX8Q06710 450 aa17.23■□□□□ 0.35
CPNE1-204ENST00000397443 LINC00311Q8N616 119 aa17.23■□□□□ 0.35
CPNE1-204ENST00000397443 C8orf31Q8N9H6 132 aa17.23■□□□□ 0.35
CPNE1-204ENST00000397443 GLYATL2Q8WU03 294 aa17.23■□□□□ 0.35
CPNE1-204ENST00000397443 FAM216AQ8WUB2 273 aa17.23■□□□□ 0.35
CPNE1-204ENST00000397443 MITD1Q8WV92 249 aa17.23■□□□□ 0.35
CPNE1-204ENST00000397443 C7orf69Q9H7B7 122 aa17.23■□□□□ 0.35
CPNE1-204ENST00000397443 IGHV3OR16-10A0A075B7F0 116 aa17.22■□□□□ 0.35
CPNE1-204ENST00000397443 IGHV4-31P0DP07 118 aa17.22■□□□□ 0.35
CPNE1-204ENST00000397443 DUTP33316 252 aaKnown RBP17.22■□□□□ 0.35
CPNE1-204ENST00000397443 EIF4EBP1Q13541 118 aaPredicted RBP17.22■□□□□ 0.35
CPNE1-204ENST00000397443 TMEM187Q14656 261 aa17.22■□□□□ 0.35
CPNE1-204ENST00000397443 C2orf68Q2NKX9 166 aa17.22■□□□□ 0.35
CPNE1-204ENST00000397443 OR4P4Q8NGL7 312 aa17.22■□□□□ 0.35
CPNE1-204ENST00000397443 ZNF596Q8TC21 504 aa17.22■□□□□ 0.35
CPNE1-204ENST00000397443 GALNT14Q96FL9 552 aa17.22■□□□□ 0.35
CPNE1-204ENST00000397443 NCR3LG1Q68D85 454 aa17.21■□□□□ 0.35
CPNE1-204ENST00000397443 BEND2Q8NDZ0 799 aa17.21■□□□□ 0.35
CPNE1-204ENST00000397443 COQ8AQ8NI60 647 aa17.21■□□□□ 0.35
CPNE1-204ENST00000397443 HSD17B10Q99714 261 aaKnown RBP17.21■□□□□ 0.35
CPNE1-204ENST00000397443 UNKLQ9H9P5 680 aaKnown RBP17.21■□□□□ 0.35
CPNE1-204ENST00000397443 LIN7CQ9NUP9 197 aaKnown RBP17.21■□□□□ 0.35
CPNE1-204ENST00000397443 AUP1Q9Y679 476 aa17.21■□□□□ 0.35
CPNE1-204ENST00000397443 TLN2Q9Y4G6 2542 aa17.21■□□□□ 0.35
CPNE1-204ENST00000397443 TEX15Q9BXT5 2789 aa17.21■□□□□ 0.35
CPNE1-204ENST00000397443 TRAV20A0A0B4J274 112 aa17.21■□□□□ 0.35
CPNE1-204ENST00000397443 RNF212BA8MTL3 300 aa17.21■□□□□ 0.35
CPNE1-204ENST00000397443 BUB1B-PAK6H3BSN5 160 aa17.21■□□□□ 0.35
CPNE1-204ENST00000397443 CCSO14618 274 aa17.21■□□□□ 0.35
CPNE1-204ENST00000397443 GOSR2O14653 212 aa17.21■□□□□ 0.35
CPNE1-204ENST00000397443 RAMP3O60896 148 aa17.21■□□□□ 0.35
CPNE1-204ENST00000397443 CXCL3P19876 107 aa17.21■□□□□ 0.35
CPNE1-204ENST00000397443 PAX6P26367 422 aa17.21■□□□□ 0.35
CPNE1-204ENST00000397443 ZNF816Q0VGE8 651 aaPredicted RBP17.21■□□□□ 0.35
CPNE1-204ENST00000397443 CATR1Q13166 79 aa17.21■□□□□ 0.35
CPNE1-204ENST00000397443 LHFPL4Q7Z7J7 247 aa17.21■□□□□ 0.35
CPNE1-204ENST00000397443 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.21■□□□□ 0.35
CPNE1-204ENST00000397443 OR11H6Q8NGC7 330 aa17.21■□□□□ 0.35
CPNE1-204ENST00000397443 C1orf159Q96HA4 380 aa17.21■□□□□ 0.35
CPNE1-204ENST00000397443 MRPL20Q9BYC9 149 aaKnown RBP17.21■□□□□ 0.35
CPNE1-204ENST00000397443 TMEM222Q9H0R3 208 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms