RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 EXTL2Q9UBQ6 330 aa16.88■□□□□ 0.29
TSPAN4-206ENST00000397408 CT45A6P0DMU7 189 aa16.87■□□□□ 0.29
TSPAN4-206ENST00000397408 CT45A5P0DMU8 189 aa16.87■□□□□ 0.29
TSPAN4-206ENST00000397408 CT45A7P0DMV0 189 aa16.87■□□□□ 0.29
TSPAN4-206ENST00000397408 FAM131AQ6UXB0 335 aa16.87■□□□□ 0.29
TSPAN4-206ENST00000397408 GLDNQ6ZMI3 551 aaPredicted RBP16.87■□□□□ 0.29
TSPAN4-206ENST00000397408 LAX1Q8IWV1 398 aa16.87■□□□□ 0.29
TSPAN4-206ENST00000397408 C5orf56Q8N8D9 126 aa16.87■□□□□ 0.29
TSPAN4-206ENST00000397408 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.87■□□□□ 0.29
TSPAN4-206ENST00000397408 MIXL1Q9H2W2 232 aa16.87■□□□□ 0.29
TSPAN4-206ENST00000397408 RSL24D1Q9UHA3 163 aaKnown RBP16.87■□□□□ 0.29
TSPAN4-206ENST00000397408 NCBP2LA6PVI3 153 aaKnown RBP16.87■□□□□ 0.29
TSPAN4-206ENST00000397408 J3QRK9 145 aa16.87■□□□□ 0.29
TSPAN4-206ENST00000397408 M0R1X1 148 aa16.87■□□□□ 0.29
TSPAN4-206ENST00000397408 CTDSP2O14595 271 aa16.87■□□□□ 0.29
TSPAN4-206ENST00000397408 FGF16O43320 207 aa16.87■□□□□ 0.29
TSPAN4-206ENST00000397408 PROP1O75360 226 aa16.87■□□□□ 0.29
TSPAN4-206ENST00000397408 TMEM95Q3KNT9 176 aa16.87■□□□□ 0.29
TSPAN4-206ENST00000397408 C11orf88Q6PI97 169 aa16.87■□□□□ 0.29
TSPAN4-206ENST00000397408 DRAXINQ8NBI3 349 aaPredicted RBP16.87■□□□□ 0.29
TSPAN4-206ENST00000397408 SLIRPQ9GZT3 109 aaKnown RBP16.87■□□□□ 0.29
TSPAN4-206ENST00000397408 ANAPC10Q9UM13 185 aa16.87■□□□□ 0.29
TSPAN4-206ENST00000397408 SRSF4Q08170 494 aaKnown RBP16.86■□□□□ 0.29
TSPAN4-206ENST00000397408 SHISA2Q6UWI4 295 aa16.86■□□□□ 0.29
TSPAN4-206ENST00000397408 C6orf62Q9GZU0 229 aaPredicted RBP16.86■□□□□ 0.29
TSPAN4-206ENST00000397408 SCPEP1Q9HB40 452 aa16.86■□□□□ 0.29
TSPAN4-206ENST00000397408 SERTAD4Q9NUC0 356 aa16.86■□□□□ 0.29
TSPAN4-206ENST00000397408 NECAP2Q9NVZ3 263 aa16.86■□□□□ 0.29
TSPAN4-206ENST00000397408 SDHAF2Q9NX18 166 aa16.86■□□□□ 0.29
TSPAN4-206ENST00000397408 ADAM30Q9UKF2 790 aa16.86■□□□□ 0.29
TSPAN4-206ENST00000397408 OR2W1Q9Y3N9 320 aa16.86■□□□□ 0.29
TSPAN4-206ENST00000397408 OR5H14A6NHG9 310 aa16.85■□□□□ 0.29
TSPAN4-206ENST00000397408 H0YJW9 148 aa16.85■□□□□ 0.29
TSPAN4-206ENST00000397408 VDAC2P45880 294 aaPredicted RBP16.85■□□□□ 0.29
TSPAN4-206ENST00000397408 C9orf152Q5JTZ5 239 aa16.85■□□□□ 0.29
TSPAN4-206ENST00000397408 KLHDC1Q8N7A1 406 aa16.85■□□□□ 0.29
TSPAN4-206ENST00000397408 OR5AP2Q8NGF4 316 aa16.85■□□□□ 0.29
TSPAN4-206ENST00000397408 GPX8Q8TED1 209 aa16.85■□□□□ 0.29
TSPAN4-206ENST00000397408 C5orf30Q96GV9 206 aa16.85■□□□□ 0.29
TSPAN4-206ENST00000397408 TUSC2O75896 110 aa16.84■□□□□ 0.29
TSPAN4-206ENST00000397408 VSIG10L2P0DP72 767 aa16.84■□□□□ 0.29
TSPAN4-206ENST00000397408 LUMP51884 338 aaPredicted RBP16.84■□□□□ 0.29
TSPAN4-206ENST00000397408 KRTAP10-3P60369 221 aa16.84■□□□□ 0.29
TSPAN4-206ENST00000397408 ACTBP60709 375 aa16.84■□□□□ 0.29
TSPAN4-206ENST00000397408 CDK10Q15131 360 aa16.84■□□□□ 0.29
TSPAN4-206ENST00000397408 MMDQ15546 238 aa16.84■□□□□ 0.29
TSPAN4-206ENST00000397408 RNASE12Q5GAN4 147 aaKnown RBP16.84■□□□□ 0.29
TSPAN4-206ENST00000397408 Q8N9W7 124 aa16.84■□□□□ 0.29
TSPAN4-206ENST00000397408 ZNF383Q8NA42 475 aa16.84■□□□□ 0.29
TSPAN4-206ENST00000397408 OR8H1Q8NGG4 311 aa16.84■□□□□ 0.29
TSPAN4-206ENST00000397408 OR5AN1Q8NGI8 311 aa16.84■□□□□ 0.29
TSPAN4-206ENST00000397408 DCUN1D5Q9BTE7 237 aa16.84■□□□□ 0.29
TSPAN4-206ENST00000397408 PLSCR3Q9NRY6 295 aa16.84■□□□□ 0.29
TSPAN4-206ENST00000397408 GAB2Q9UQC2 676 aa16.84■□□□□ 0.29
TSPAN4-206ENST00000397408 IGKV1D-13A0A0B4J2D9 117 aa16.83■□□□□ 0.28
TSPAN4-206ENST00000397408 H7C2Y5 167 aa16.83■□□□□ 0.28
TSPAN4-206ENST00000397408 PEX14O75381 377 aa16.83■□□□□ 0.28
TSPAN4-206ENST00000397408 OR5H8P0DN80 308 aa16.83■□□□□ 0.28
TSPAN4-206ENST00000397408 IGKV1-13P0DP09 117 aa16.83■□□□□ 0.28
TSPAN4-206ENST00000397408 FCGR2CP31995 323 aa16.83■□□□□ 0.28
TSPAN4-206ENST00000397408 F2RL1P55085 397 aa16.83■□□□□ 0.28
TSPAN4-206ENST00000397408 LINC00205P59089 165 aa16.83■□□□□ 0.28
TSPAN4-206ENST00000397408 MCFD2Q8NI22 146 aa16.83■□□□□ 0.28
TSPAN4-206ENST00000397408 WASHC3Q9Y3C0 194 aa16.83■□□□□ 0.28
TSPAN4-206ENST00000397408 ZNF701M0R085 212 aaPredicted RBP16.82■□□□□ 0.28
TSPAN4-206ENST00000397408 SULT1C2O00338 296 aa16.82■□□□□ 0.28
TSPAN4-206ENST00000397408 NAT1P18440 290 aa16.82■□□□□ 0.28
TSPAN4-206ENST00000397408 AADACP22760 399 aa16.82■□□□□ 0.28
TSPAN4-206ENST00000397408 MC5RP33032 325 aa16.82■□□□□ 0.28
TSPAN4-206ENST00000397408 ZNF645Q8N7E2 425 aa16.82■□□□□ 0.28
TSPAN4-206ENST00000397408 RITA1Q96K30 269 aa16.82■□□□□ 0.28
TSPAN4-206ENST00000397408 EHFQ9NZC4 300 aa16.82■□□□□ 0.28
TSPAN4-206ENST00000397408 APOA2P02652 100 aa16.81■□□□□ 0.28
TSPAN4-206ENST00000397408 CNTFRP26992 372 aa16.81■□□□□ 0.28
TSPAN4-206ENST00000397408 RCVRNP35243 200 aa16.81■□□□□ 0.28
TSPAN4-206ENST00000397408 TAS2R46P59540 309 aa16.81■□□□□ 0.28
TSPAN4-206ENST00000397408 FAM71E2Q8N5Q1 922 aa16.81■□□□□ 0.28
TSPAN4-206ENST00000397408 OR5H2Q8NGV7 314 aa16.81■□□□□ 0.28
TSPAN4-206ENST00000397408 ABHD1Q96SE0 405 aa16.81■□□□□ 0.28
TSPAN4-206ENST00000397408 CITED1Q99966 193 aa16.81■□□□□ 0.28
TSPAN4-206ENST00000397408 RASL11BQ9BPW5 248 aa16.81■□□□□ 0.28
TSPAN4-206ENST00000397408 LIN7CQ9NUP9 197 aaKnown RBP16.81■□□□□ 0.28
TSPAN4-206ENST00000397408 TPPPO94811 219 aa16.8■□□□□ 0.28
TSPAN4-206ENST00000397408 PPYP01298 95 aa16.8■□□□□ 0.28
TSPAN4-206ENST00000397408 PMP2P02689 132 aa16.8■□□□□ 0.28
TSPAN4-206ENST00000397408 HLA-DMAP28067 261 aa16.8■□□□□ 0.28
TSPAN4-206ENST00000397408 C15orf40Q8WUR7 153 aa16.8■□□□□ 0.28
TSPAN4-206ENST00000397408 DIRAS2Q96HU8 199 aa16.8■□□□□ 0.28
TSPAN4-206ENST00000397408 WNT10AQ9GZT5 417 aa16.8■□□□□ 0.28
TSPAN4-206ENST00000397408 NXF2Q9GZY0 626 aaKnown RBP16.8■□□□□ 0.28
TSPAN4-206ENST00000397408 NBR2O15453 112 aa16.79■□□□□ 0.28
TSPAN4-206ENST00000397408 HRH1P35367 487 aa16.79■□□□□ 0.28
TSPAN4-206ENST00000397408 RFX2P48378 723 aa16.79■□□□□ 0.28
TSPAN4-206ENST00000397408 PDPNQ86YL7 162 aa16.79■□□□□ 0.28
TSPAN4-206ENST00000397408 OR52I2Q8NH67 350 aa16.79■□□□□ 0.28
TSPAN4-206ENST00000397408 SLC35D1Q9NTN3 355 aa16.79■□□□□ 0.28
TSPAN4-206ENST00000397408 RBBP9O75884 186 aa16.79■□□□□ 0.28
TSPAN4-206ENST00000397408 SLC22A5O76082 557 aa16.79■□□□□ 0.28
TSPAN4-206ENST00000397408 IGKV1-16P04430 117 aa16.79■□□□□ 0.28
TSPAN4-206ENST00000397408 THBS3P49746 956 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms