RNA–Protein interactions for RNA: ENST00000397105.7

SEC13-207, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 883 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-207ENST00000397105 OR2D2Q9H210 308 aa16.65■□□□□ 0.26
SEC13-207ENST00000397105 IFT46Q9NQC8 304 aa16.65■□□□□ 0.26
SEC13-207ENST00000397105 SERTAD4Q9NUC0 356 aa16.65■□□□□ 0.26
SEC13-207ENST00000397105 HLA-DQB1P01920 261 aa16.64■□□□□ 0.25
SEC13-207ENST00000397105 VDAC2P45880 294 aaPredicted RBP16.64■□□□□ 0.25
SEC13-207ENST00000397105 C9orf152Q5JTZ5 239 aa16.64■□□□□ 0.25
SEC13-207ENST00000397105 CCDC59Q9P031 241 aaKnown RBP16.64■□□□□ 0.25
SEC13-207ENST00000397105 OR2W1Q9Y3N9 320 aa16.64■□□□□ 0.25
SEC13-207ENST00000397105 MEIS3P1A6NDR6 274 aa16.63■□□□□ 0.25
SEC13-207ENST00000397105 CCDC160A6NGH7 325 aa16.63■□□□□ 0.25
SEC13-207ENST00000397105 OR5H14A6NHG9 310 aa16.63■□□□□ 0.25
SEC13-207ENST00000397105 SH2D7A6NKC9 451 aaPredicted RBP16.63■□□□□ 0.25
SEC13-207ENST00000397105 PROP1O75360 226 aa16.63■□□□□ 0.25
SEC13-207ENST00000397105 VSIG10L2P0DP72 767 aa16.63■□□□□ 0.25
SEC13-207ENST00000397105 NFYAP23511 347 aaPredicted RBP16.63■□□□□ 0.25
SEC13-207ENST00000397105 SRSF4Q08170 494 aaKnown RBP16.63■□□□□ 0.25
SEC13-207ENST00000397105 KLHDC1Q8N7A1 406 aa16.63■□□□□ 0.25
SEC13-207ENST00000397105 CITED1Q99966 193 aa16.63■□□□□ 0.25
SEC13-207ENST00000397105 PLSCR3Q9NRY6 295 aa16.63■□□□□ 0.25
SEC13-207ENST00000397105 NECAP2Q9NVZ3 263 aa16.63■□□□□ 0.25
SEC13-207ENST00000397105 M0R1X1 148 aa16.62■□□□□ 0.25
SEC13-207ENST00000397105 RGS5O15539 181 aa16.62■□□□□ 0.25
SEC13-207ENST00000397105 FCER2P06734 321 aa16.62■□□□□ 0.25
SEC13-207ENST00000397105 KRTAP10-3P60369 221 aa16.62■□□□□ 0.25
SEC13-207ENST00000397105 FAM131AQ6UXB0 335 aa16.62■□□□□ 0.25
SEC13-207ENST00000397105 SNX29P2Q8IUI4 249 aa16.62■□□□□ 0.25
SEC13-207ENST00000397105 DRAXINQ8NBI3 349 aaPredicted RBP16.62■□□□□ 0.25
SEC13-207ENST00000397105 OR5AP2Q8NGF4 316 aa16.62■□□□□ 0.25
SEC13-207ENST00000397105 OR5AN1Q8NGI8 311 aa16.62■□□□□ 0.25
SEC13-207ENST00000397105 SNAPC3Q92966 411 aa16.62■□□□□ 0.25
SEC13-207ENST00000397105 RASL11BQ9BPW5 248 aa16.62■□□□□ 0.25
SEC13-207ENST00000397105 SCPEP1Q9HB40 452 aa16.62■□□□□ 0.25
SEC13-207ENST00000397105 SDHAF2Q9NX18 166 aa16.62■□□□□ 0.25
SEC13-207ENST00000397105 EXTL2Q9UBQ6 330 aa16.62■□□□□ 0.25
SEC13-207ENST00000397105 H0YJW9 148 aa16.61■□□□□ 0.25
SEC13-207ENST00000397105 H7C2Y5 167 aa16.61■□□□□ 0.25
SEC13-207ENST00000397105 TPPPO94811 219 aa16.61■□□□□ 0.25
SEC13-207ENST00000397105 LUMP51884 338 aaPredicted RBP16.61■□□□□ 0.25
SEC13-207ENST00000397105 F2RL1P55085 397 aa16.61■□□□□ 0.25
SEC13-207ENST00000397105 ACTBP60709 375 aa16.61■□□□□ 0.25
SEC13-207ENST00000397105 GLDNQ6ZMI3 551 aaPredicted RBP16.61■□□□□ 0.25
SEC13-207ENST00000397105 Q8N9W7 124 aa16.61■□□□□ 0.25
SEC13-207ENST00000397105 RBMXL1Q96E39 390 aaKnown RBP16.61■□□□□ 0.25
SEC13-207ENST00000397105 LIN7CQ9NUP9 197 aaKnown RBP16.61■□□□□ 0.25
SEC13-207ENST00000397105 ADAM30Q9UKF2 790 aa16.61■□□□□ 0.25
SEC13-207ENST00000397105 WASHC3Q9Y3C0 194 aa16.61■□□□□ 0.25
SEC13-207ENST00000397105 J3QRK9 145 aa16.6■□□□□ 0.25
SEC13-207ENST00000397105 CTDSP2O14595 271 aa16.6■□□□□ 0.25
SEC13-207ENST00000397105 SLC22A5O76082 557 aa16.6■□□□□ 0.25
SEC13-207ENST00000397105 OR5H8P0DN80 308 aa16.6■□□□□ 0.25
SEC13-207ENST00000397105 FCGR2CP31995 323 aa16.6■□□□□ 0.25
SEC13-207ENST00000397105 MMDQ15546 238 aa16.6■□□□□ 0.25
SEC13-207ENST00000397105 TMEM95Q3KNT9 176 aa16.6■□□□□ 0.25
SEC13-207ENST00000397105 ZNF383Q8NA42 475 aa16.6■□□□□ 0.25
SEC13-207ENST00000397105 SGMS2Q8NHU3 365 aa16.6■□□□□ 0.25
SEC13-207ENST00000397105 GPX8Q8TED1 209 aa16.6■□□□□ 0.25
SEC13-207ENST00000397105 C15orf40Q8WUR7 153 aa16.6■□□□□ 0.25
SEC13-207ENST00000397105 RITA1Q96K30 269 aa16.6■□□□□ 0.25
SEC13-207ENST00000397105 WNT10AQ9GZT5 417 aa16.6■□□□□ 0.25
SEC13-207ENST00000397105 ANAPC10Q9UM13 185 aa16.6■□□□□ 0.25
SEC13-207ENST00000397105 SULT1C2O00338 296 aa16.59■□□□□ 0.25
SEC13-207ENST00000397105 RBBP9O75884 186 aa16.59■□□□□ 0.25
SEC13-207ENST00000397105 TUSC2O75896 110 aa16.59■□□□□ 0.25
SEC13-207ENST00000397105 APOA2P02652 100 aa16.59■□□□□ 0.25
SEC13-207ENST00000397105 NAT1P18440 290 aa16.59■□□□□ 0.25
SEC13-207ENST00000397105 CDK10Q15131 360 aa16.59■□□□□ 0.25
SEC13-207ENST00000397105 FAM71E2Q8N5Q1 922 aa16.59■□□□□ 0.25
SEC13-207ENST00000397105 ZNF645Q8N7E2 425 aa16.59■□□□□ 0.25
SEC13-207ENST00000397105 RNF5Q99942 180 aa16.59■□□□□ 0.25
SEC13-207ENST00000397105 RSL24D1Q9UHA3 163 aaKnown RBP16.59■□□□□ 0.25
SEC13-207ENST00000397105 TAS2R46P59540 309 aa16.58■□□□□ 0.24
SEC13-207ENST00000397105 TAGLNQ01995 201 aaKnown RBP16.58■□□□□ 0.24
SEC13-207ENST00000397105 CENPVQ7Z7K6 275 aaPredicted RBP16.58■□□□□ 0.24
SEC13-207ENST00000397105 PDPNQ86YL7 162 aa16.58■□□□□ 0.24
SEC13-207ENST00000397105 LAX1Q8IWV1 398 aa16.58■□□□□ 0.24
SEC13-207ENST00000397105 NPBQ8NG41 125 aa16.58■□□□□ 0.24
SEC13-207ENST00000397105 ADTRPQ96IZ2 230 aa16.58■□□□□ 0.24
SEC13-207ENST00000397105 SLIRPQ9GZT3 109 aaKnown RBP16.58■□□□□ 0.24
SEC13-207ENST00000397105 MIXL1Q9H2W2 232 aa16.58■□□□□ 0.24
SEC13-207ENST00000397105 ZNF701M0R085 212 aaPredicted RBP16.57■□□□□ 0.24
SEC13-207ENST00000397105 NBR2O15453 112 aa16.57■□□□□ 0.24
SEC13-207ENST00000397105 IGHG2P01859 326 aa16.57■□□□□ 0.24
SEC13-207ENST00000397105 THBS3P49746 956 aa16.57■□□□□ 0.24
SEC13-207ENST00000397105 LINC00205P59089 165 aa16.57■□□□□ 0.24
SEC13-207ENST00000397105 SLC35E3Q7Z769 313 aa16.57■□□□□ 0.24
SEC13-207ENST00000397105 OR5H2Q8NGV7 314 aa16.57■□□□□ 0.24
SEC13-207ENST00000397105 GIMAP1Q8WWP7 306 aa16.57■□□□□ 0.24
SEC13-207ENST00000397105 C5orf30Q96GV9 206 aa16.57■□□□□ 0.24
SEC13-207ENST00000397105 C6orf62Q9GZU0 229 aaPredicted RBP16.57■□□□□ 0.24
SEC13-207ENST00000397105 RBM38Q9H0Z9 239 aaKnown RBP16.57■□□□□ 0.24
SEC13-207ENST00000397105 KIAA1456Q9P272 454 aa16.57■□□□□ 0.24
SEC13-207ENST00000397105 IGKV1D-13A0A0B4J2D9 117 aa16.56■□□□□ 0.24
SEC13-207ENST00000397105 PMP2P02689 132 aa16.56■□□□□ 0.24
SEC13-207ENST00000397105 IGKV1-13P0DP09 117 aa16.56■□□□□ 0.24
SEC13-207ENST00000397105 AADACP22760 399 aa16.56■□□□□ 0.24
SEC13-207ENST00000397105 OVCH2Q7RTZ1 564 aa16.56■□□□□ 0.24
SEC13-207ENST00000397105 LYSMD2Q8IV50 215 aa16.56■□□□□ 0.24
SEC13-207ENST00000397105 FOXRED2Q8IWF2 684 aa16.56■□□□□ 0.24
SEC13-207ENST00000397105 WIPF2Q8TF74 440 aaPredicted RBP16.56■□□□□ 0.24
SEC13-207ENST00000397105 FLYWCH2Q96CP2 140 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms