RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 DOCK7Q96N67 2140 aa12.47□□□□□ -0.41
CCNF-202ENST00000397066 LY6G6EA0A0G2JKS1 128 aa12.46□□□□□ -0.41
CCNF-202ENST00000397066 A8MWP6 167 aa12.46□□□□□ -0.41
CCNF-202ENST00000397066 CDIPTO14735 213 aa12.46□□□□□ -0.41
CCNF-202ENST00000397066 PI4KAP42356 2102 aa12.46□□□□□ -0.41
CCNF-202ENST00000397066 OR3A1P47881 315 aa12.46□□□□□ -0.41
CCNF-202ENST00000397066 C3AR1Q16581 482 aa12.46□□□□□ -0.41
CCNF-202ENST00000397066 COLCA1Q6ZS62 124 aa12.46□□□□□ -0.41
CCNF-202ENST00000397066 Q8NFD4 153 aa12.46□□□□□ -0.41
CCNF-202ENST00000397066 U3KQA8 63 aa12.46□□□□□ -0.41
CCNF-202ENST00000397066 MDFIC2A0A1B0GVS7 189 aa12.46□□□□□ -0.41
CCNF-202ENST00000397066 MPLP40238 635 aa12.46□□□□□ -0.41
CCNF-202ENST00000397066 EDDM3BP56851 147 aa12.46□□□□□ -0.41
CCNF-202ENST00000397066 TFF3Q07654 80 aa12.46□□□□□ -0.41
CCNF-202ENST00000397066 ATP6V1FQ16864 119 aa12.46□□□□□ -0.41
CCNF-202ENST00000397066 LRP11Q86VZ4 500 aa12.46□□□□□ -0.41
CCNF-202ENST00000397066 PINLYPA6NC86 204 aa12.46□□□□□ -0.42
CCNF-202ENST00000397066 J3QT63 122 aa12.46□□□□□ -0.42
CCNF-202ENST00000397066 IGHEP01854 428 aa12.46□□□□□ -0.42
CCNF-202ENST00000397066 CCKARP32238 428 aa12.46□□□□□ -0.42
CCNF-202ENST00000397066 DUSP3P51452 185 aaPredicted RBP12.46□□□□□ -0.42
CCNF-202ENST00000397066 NUFIP2Q7Z417 695 aaKnown RBP12.46□□□□□ -0.42
CCNF-202ENST00000397066 TMEM170AQ8WVE7 144 aa12.46□□□□□ -0.42
CCNF-202ENST00000397066 GALMQ96C23 342 aa12.46□□□□□ -0.42
CCNF-202ENST00000397066 CBLN4Q9NTU7 201 aa12.46□□□□□ -0.42
CCNF-202ENST00000397066 C1QTNF9BB2RNN3 333 aa12.45□□□□□ -0.42
CCNF-202ENST00000397066 ZG16O60844 167 aa12.45□□□□□ -0.42
CCNF-202ENST00000397066 ZNF585BQ52M93 769 aa12.45□□□□□ -0.42
CCNF-202ENST00000397066 MS4A10Q96PG2 267 aa12.45□□□□□ -0.42
CCNF-202ENST00000397066 UBE2ZQ9H832 354 aaPredicted RBP12.45□□□□□ -0.42
CCNF-202ENST00000397066 SH2D2AQ9NP31 389 aa12.45□□□□□ -0.42
CCNF-202ENST00000397066 POLDIP2Q9Y2S7 368 aa12.45□□□□□ -0.42
CCNF-202ENST00000397066 KIAA1324LA8MWY0 1029 aaPredicted RBP12.45□□□□□ -0.42
CCNF-202ENST00000397066 CELA3AP09093 270 aa12.45□□□□□ -0.42
CCNF-202ENST00000397066 GABRA2P47869 451 aa12.45□□□□□ -0.42
CCNF-202ENST00000397066 ZNF124Q15973 351 aa12.45□□□□□ -0.42
CCNF-202ENST00000397066 BATFQ16520 125 aa12.45□□□□□ -0.42
CCNF-202ENST00000397066 LINC00696Q6ZRV3 163 aa12.45□□□□□ -0.42
CCNF-202ENST00000397066 RAMP3O60896 148 aa12.45□□□□□ -0.42
CCNF-202ENST00000397066 RPL29P47914 159 aaKnown RBP12.45□□□□□ -0.42
CCNF-202ENST00000397066 CXorf67Q86X51 503 aaPredicted RBP12.45□□□□□ -0.42
CCNF-202ENST00000397066 CISD2Q8N5K1 135 aaKnown RBP12.45□□□□□ -0.42
CCNF-202ENST00000397066 ZDHHC16Q969W1 377 aa12.45□□□□□ -0.42
CCNF-202ENST00000397066 OBP2BQ9NPH6 170 aa12.45□□□□□ -0.42
CCNF-202ENST00000397066 SOX15O60248 233 aa12.45□□□□□ -0.42
CCNF-202ENST00000397066 CEBPDP49716 269 aaPredicted RBP12.45□□□□□ -0.42
CCNF-202ENST00000397066 DCAF12Q5T6F0 453 aa12.45□□□□□ -0.42
CCNF-202ENST00000397066 C2orf88Q9BSF0 95 aa12.45□□□□□ -0.42
CCNF-202ENST00000397066 OR4A8P0C604 315 aa12.44□□□□□ -0.42
CCNF-202ENST00000397066 SELLP14151 372 aa12.44□□□□□ -0.42
CCNF-202ENST00000397066 KITLGP21583 273 aa12.44□□□□□ -0.42
CCNF-202ENST00000397066 SRP14P37108 136 aaKnown RBP12.44□□□□□ -0.42
CCNF-202ENST00000397066 PDLIM3Q53GG5 364 aaPredicted RBP12.44□□□□□ -0.42
CCNF-202ENST00000397066 NANOS1Q8WY41 292 aaKnown RBP12.44□□□□□ -0.42
CCNF-202ENST00000397066 TMEM204Q9BSN7 226 aa12.44□□□□□ -0.42
CCNF-202ENST00000397066 OR6C3Q9NZP0 311 aa12.44□□□□□ -0.42
CCNF-202ENST00000397066 ABI3Q9P2A4 366 aa12.44□□□□□ -0.42
CCNF-202ENST00000397066 SIT1Q9Y3P8 196 aa12.44□□□□□ -0.42
CCNF-202ENST00000397066 TIMM9Q9Y5J7 89 aa12.44□□□□□ -0.42
CCNF-202ENST00000397066 ARHGAP21Q5T5U3 1957 aa12.44□□□□□ -0.42
CCNF-202ENST00000397066 F6UZH7 168 aa12.44□□□□□ -0.42
CCNF-202ENST00000397066 MKRN2OSH3BPM6 223 aa12.44□□□□□ -0.42
CCNF-202ENST00000397066 NDUFB4O95168 129 aa12.44□□□□□ -0.42
CCNF-202ENST00000397066 MRPL49Q13405 166 aaKnown RBP12.44□□□□□ -0.42
CCNF-202ENST00000397066 AGMATQ9BSE5 352 aa12.44□□□□□ -0.42
CCNF-202ENST00000397066 FAM234AQ9H0X4 552 aa12.44□□□□□ -0.42
CCNF-202ENST00000397066 FREM1Q5H8C1 2179 aa12.44□□□□□ -0.42
CCNF-202ENST00000397066 ZNF503-AS2A6NEH8 195 aa12.44□□□□□ -0.42
CCNF-202ENST00000397066 FAM90A26D6RGX4 464 aa12.44□□□□□ -0.42
CCNF-202ENST00000397066 SP5Q6BEB4 398 aaPredicted RBP12.44□□□□□ -0.42
CCNF-202ENST00000397066 OR1L1Q8NH94 360 aa12.44□□□□□ -0.42
CCNF-202ENST00000397066 RNASEH2CQ8TDP1 164 aaKnown RBP12.44□□□□□ -0.42
CCNF-202ENST00000397066 TMEM45BQ96B21 275 aa12.44□□□□□ -0.42
CCNF-202ENST00000397066 CIB3Q96Q77 187 aaPredicted RBP12.44□□□□□ -0.42
CCNF-202ENST00000397066 ZDHHC11Q9H8X9 412 aa12.44□□□□□ -0.42
CCNF-202ENST00000397066 TRAV38-1A0A0B4J264 116 aa12.43□□□□□ -0.42
CCNF-202ENST00000397066 DEFB108AA8MXU0 73 aa12.43□□□□□ -0.42
CCNF-202ENST00000397066 S1PR2O95136 353 aa12.43□□□□□ -0.42
CCNF-202ENST00000397066 MAGEA5P43359 124 aa12.43□□□□□ -0.42
CCNF-202ENST00000397066 OR52L2PQ8NGH6 319 aa12.43□□□□□ -0.42
CCNF-202ENST00000397066 PLPPR2Q96GM1 343 aa12.43□□□□□ -0.42
CCNF-202ENST00000397066 HIPK2Q9H2X6 1198 aa12.43□□□□□ -0.42
CCNF-202ENST00000397066 IGHV3-43A0A0B4J1X8 118 aa12.43□□□□□ -0.42
CCNF-202ENST00000397066 IGHV3-43DP0DP04 118 aa12.43□□□□□ -0.42
CCNF-202ENST00000397066 RAB4BP61018 213 aa12.43□□□□□ -0.42
CCNF-202ENST00000397066 RFESDQ8TAC1 157 aa12.43□□□□□ -0.42
CCNF-202ENST00000397066 POM121L2Q96KW2 1035 aa12.43□□□□□ -0.42
CCNF-202ENST00000397066 NPCDR1Q9BY65 106 aa12.43□□□□□ -0.42
CCNF-202ENST00000397066 HES7Q9BYE0 225 aa12.43□□□□□ -0.42
CCNF-202ENST00000397066 CHD3Q12873 2000 aaKnown RBP12.43□□□□□ -0.42
CCNF-202ENST00000397066 ODAMA1E959 279 aa12.43□□□□□ -0.42
CCNF-202ENST00000397066 M0R143 59 aa12.43□□□□□ -0.42
CCNF-202ENST00000397066 SPCS3P61009 180 aa12.43□□□□□ -0.42
CCNF-202ENST00000397066 GNB2P62879 340 aa12.43□□□□□ -0.42
CCNF-202ENST00000397066 PPP1R32Q7Z5V6 425 aa12.43□□□□□ -0.42
CCNF-202ENST00000397066 SGMS2Q8NHU3 365 aa12.43□□□□□ -0.42
CCNF-202ENST00000397066 RYDENQ9NUL5 291 aaKnown RBP12.43□□□□□ -0.42
CCNF-202ENST00000397066 SELEP16581 610 aa12.42□□□□□ -0.42
CCNF-202ENST00000397066 NRN1LQ496H8 165 aa12.42□□□□□ -0.42
CCNF-202ENST00000397066 SCCPDHQ8NBX0 429 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms