RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 PDLIM4P50479 330 aa11.7□□□□□ -0.54
NUP98-204ENST00000397004 Q6ZR03 302 aa11.7□□□□□ -0.54
NUP98-204ENST00000397004 ZNF114Q8NC26 417 aa11.7□□□□□ -0.54
NUP98-204ENST00000397004 TMEM37Q8WXS4 190 aa11.7□□□□□ -0.54
NUP98-204ENST00000397004 STRADBQ9C0K7 418 aa11.7□□□□□ -0.54
NUP98-204ENST00000397004 GP6Q9HCN6 339 aa11.7□□□□□ -0.54
NUP98-204ENST00000397004 CEACAM6P40199 344 aa11.7□□□□□ -0.54
NUP98-204ENST00000397004 TNFRSF9Q07011 255 aa11.7□□□□□ -0.54
NUP98-204ENST00000397004 PMS2P11Q13670 270 aa11.7□□□□□ -0.54
NUP98-204ENST00000397004 LINC00470Q9BZP3 86 aa11.7□□□□□ -0.54
NUP98-204ENST00000397004 CTDSP1Q9GZU7 261 aa11.7□□□□□ -0.54
NUP98-204ENST00000397004 PTPRBP23467 1997 aa11.7□□□□□ -0.54
NUP98-204ENST00000397004 PGPEP1LA6NFU8 196 aa11.7□□□□□ -0.54
NUP98-204ENST00000397004 DEGS1O15121 323 aa11.7□□□□□ -0.54
NUP98-204ENST00000397004 PDGFBP01127 241 aaPredicted RBP11.7□□□□□ -0.54
NUP98-204ENST00000397004 CELA3BP08861 270 aa11.7□□□□□ -0.54
NUP98-204ENST00000397004 GALR1P47211 349 aa11.7□□□□□ -0.54
NUP98-204ENST00000397004 ERVK11-1P61568 191 aa11.7□□□□□ -0.54
NUP98-204ENST00000397004 ZNF66Q6ZN08 573 aa11.7□□□□□ -0.54
NUP98-204ENST00000397004 ACTR3CQ9C0K3 210 aaPredicted RBP11.7□□□□□ -0.54
NUP98-204ENST00000397004 ZNF703Q9H7S9 590 aaPredicted RBP11.7□□□□□ -0.54
NUP98-204ENST00000397004 KCNS2Q9ULS6 477 aa11.7□□□□□ -0.54
NUP98-204ENST00000397004 FUT9Q9Y231 359 aa11.7□□□□□ -0.54
NUP98-204ENST00000397004 A0A1W2PPQ1 181 aa11.69□□□□□ -0.54
NUP98-204ENST00000397004 DVL1O14640 695 aa11.69□□□□□ -0.54
NUP98-204ENST00000397004 KRASP01116 189 aa11.69□□□□□ -0.54
NUP98-204ENST00000397004 FAM3BP58499 235 aaPredicted RBP11.69□□□□□ -0.54
NUP98-204ENST00000397004 PARD6GQ9BYG4 376 aaPredicted RBP11.69□□□□□ -0.54
NUP98-204ENST00000397004 SLC39A9Q9NUM3 307 aa11.69□□□□□ -0.54
NUP98-204ENST00000397004 ZG16O60844 167 aa11.69□□□□□ -0.54
NUP98-204ENST00000397004 PMP22Q01453 160 aa11.69□□□□□ -0.54
NUP98-204ENST00000397004 RIMS4Q9H426 269 aaPredicted RBP11.69□□□□□ -0.54
NUP98-204ENST00000397004 MBNL3Q9NUK0 354 aaKnown RBP11.69□□□□□ -0.54
NUP98-204ENST00000397004 MAGEA5P43359 124 aa11.69□□□□□ -0.54
NUP98-204ENST00000397004 TAS2R60P59551 318 aa11.69□□□□□ -0.54
NUP98-204ENST00000397004 ACTL10Q5JWF8 245 aa11.69□□□□□ -0.54
NUP98-204ENST00000397004 HSPB7Q9UBY9 170 aa11.69□□□□□ -0.54
NUP98-204ENST00000397004 FAM166BA8MTA8 275 aa11.68□□□□□ -0.54
NUP98-204ENST00000397004 CLDN1O95832 211 aa11.68□□□□□ -0.54
NUP98-204ENST00000397004 ODAMA1E959 279 aa11.68□□□□□ -0.54
NUP98-204ENST00000397004 C17orf98A8MV24 154 aa11.68□□□□□ -0.54
NUP98-204ENST00000397004 PAGE4O60829 102 aa11.68□□□□□ -0.54
NUP98-204ENST00000397004 CYB561P49447 251 aa11.68□□□□□ -0.54
NUP98-204ENST00000397004 GNG3P63215 75 aa11.68□□□□□ -0.54
NUP98-204ENST00000397004 ZNF816Q0VGE8 651 aaPredicted RBP11.68□□□□□ -0.54
NUP98-204ENST00000397004 PMS2CLQ68D20 193 aa11.68□□□□□ -0.54
NUP98-204ENST00000397004 SCCPDHQ8NBX0 429 aa11.68□□□□□ -0.54
NUP98-204ENST00000397004 RAB24Q969Q5 203 aa11.68□□□□□ -0.54
NUP98-204ENST00000397004 B4E171 279 aa11.68□□□□□ -0.54
NUP98-204ENST00000397004 S1PR2O95136 353 aa11.68□□□□□ -0.54
NUP98-204ENST00000397004 CD33P20138 364 aa11.68□□□□□ -0.54
NUP98-204ENST00000397004 TSPAN7P41732 249 aa11.68□□□□□ -0.54
NUP98-204ENST00000397004 HBG1P69891 147 aa11.68□□□□□ -0.54
NUP98-204ENST00000397004 HBG2P69892 147 aa11.68□□□□□ -0.54
NUP98-204ENST00000397004 OR4F5Q8NH21 305 aa11.68□□□□□ -0.54
NUP98-204ENST00000397004 TMEM170AQ8WVE7 144 aa11.68□□□□□ -0.54
NUP98-204ENST00000397004 OR4F4Q96R69 305 aa11.68□□□□□ -0.54
NUP98-204ENST00000397004 MRPS18CQ9Y3D5 142 aaKnown RBP11.68□□□□□ -0.54
NUP98-204ENST00000397004 TRBV20OR9-2A0A075B6H5 130 aa11.67□□□□□ -0.54
NUP98-204ENST00000397004 TEX38Q6PEX7 206 aa11.67□□□□□ -0.54
NUP98-204ENST00000397004 TGIF2LXQ8IUE1 241 aa11.67□□□□□ -0.54
NUP98-204ENST00000397004 ATG101Q9BSB4 218 aa11.67□□□□□ -0.54
NUP98-204ENST00000397004 C2orf88Q9BSF0 95 aa11.67□□□□□ -0.54
NUP98-204ENST00000397004 TSTD3H0UI37 97 aa11.67□□□□□ -0.54
NUP98-204ENST00000397004 CDIPTO14735 213 aa11.67□□□□□ -0.54
NUP98-204ENST00000397004 ST8SIA5O15466 376 aa11.67□□□□□ -0.54
NUP98-204ENST00000397004 CRYAAP02489 173 aa11.67□□□□□ -0.54
NUP98-204ENST00000397004 CFIP05156 583 aa11.67□□□□□ -0.54
NUP98-204ENST00000397004 COX5BP10606 129 aa11.67□□□□□ -0.54
NUP98-204ENST00000397004 TMEM256Q8N2U0 113 aa11.67□□□□□ -0.54
NUP98-204ENST00000397004 OR5T1Q8NG75 326 aa11.67□□□□□ -0.54
NUP98-204ENST00000397004 OR2M7Q8NG81 312 aa11.67□□□□□ -0.54
NUP98-204ENST00000397004 OR52L2PQ8NGH6 319 aa11.67□□□□□ -0.54
NUP98-204ENST00000397004 OR10G9Q8NGN4 311 aa11.67□□□□□ -0.54
NUP98-204ENST00000397004 OR10G7Q8NGN6 311 aa11.67□□□□□ -0.54
NUP98-204ENST00000397004 TRAPPC2LQ9UL33 140 aa11.67□□□□□ -0.54
NUP98-204ENST00000397004 GYPAP02724 150 aa11.67□□□□□ -0.54
NUP98-204ENST00000397004 BTNL3Q6UXE8 466 aa11.67□□□□□ -0.54
NUP98-204ENST00000397004 LINC00596Q86U02 117 aa11.67□□□□□ -0.54
NUP98-204ENST00000397004 ZNF573Q86YE8 665 aa11.67□□□□□ -0.54
NUP98-204ENST00000397004 ZNF808Q8N4W9 903 aaPredicted RBP11.67□□□□□ -0.54
NUP98-204ENST00000397004 GGCTO75223 188 aaKnown RBP11.67□□□□□ -0.54
NUP98-204ENST00000397004 CHRNA7P36544 502 aa11.67□□□□□ -0.54
NUP98-204ENST00000397004 CT55Q8WUE5 264 aa11.67□□□□□ -0.54
NUP98-204ENST00000397004 PINX1Q96BK5 328 aaKnown RBP11.67□□□□□ -0.54
NUP98-204ENST00000397004 WNT9BO14905 357 aa11.66□□□□□ -0.54
NUP98-204ENST00000397004 HRASP01112 189 aa11.66□□□□□ -0.54
NUP98-204ENST00000397004 RPL15P61313 204 aaKnown RBP11.66□□□□□ -0.54
NUP98-204ENST00000397004 GNB1P62873 340 aa11.66□□□□□ -0.54
NUP98-204ENST00000397004 PEAR1Q5VY43 1037 aaPredicted RBP11.66□□□□□ -0.54
NUP98-204ENST00000397004 NPCDR1Q9BY65 106 aa11.66□□□□□ -0.54
NUP98-204ENST00000397004 WIPI2Q9Y4P8 454 aa11.66□□□□□ -0.54
NUP98-204ENST00000397004 LINC00473A8K010 186 aa11.66□□□□□ -0.54
NUP98-204ENST00000397004 ZNF705GA8MUZ8 300 aaPredicted RBP11.66□□□□□ -0.54
NUP98-204ENST00000397004 H7BYZ3 331 aa11.66□□□□□ -0.54
NUP98-204ENST00000397004 RBFOX2O43251 390 aaKnown RBP eCLIP11.66□□□□□ -0.54
NUP98-204ENST00000397004 ATP5G3P48201 142 aa11.66□□□□□ -0.54
NUP98-204ENST00000397004 SSTP61278 116 aa11.66□□□□□ -0.54
NUP98-204ENST00000397004 TGIF2LYQ8IUE0 185 aa11.66□□□□□ -0.54
NUP98-204ENST00000397004 C12orf49Q9H741 205 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms