RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 SLC6A1P30531 599 aa8.3□□□□□ -1.08
NEDD8-202ENST00000396828 CCR6P51684 374 aa8.3□□□□□ -1.08
NEDD8-202ENST00000396828 RBMS2Q15434 407 aaKnown RBP8.3□□□□□ -1.08
NEDD8-202ENST00000396828 AANATQ16613 207 aa8.3□□□□□ -1.08
NEDD8-202ENST00000396828 NSUN5P1Q3KNT7 163 aa8.3□□□□□ -1.08
NEDD8-202ENST00000396828 TMEM95Q3KNT9 176 aa8.3□□□□□ -1.08
NEDD8-202ENST00000396828 SCGB2B2Q4G0G5 96 aa8.3□□□□□ -1.08
NEDD8-202ENST00000396828 PLET1Q6UQ28 207 aa8.3□□□□□ -1.08
NEDD8-202ENST00000396828 IDO2Q6ZQW0 420 aa8.3□□□□□ -1.08
NEDD8-202ENST00000396828 OR13A1Q8NGR1 328 aa8.3□□□□□ -1.08
NEDD8-202ENST00000396828 OR2T6Q8NHC8 308 aa8.3□□□□□ -1.08
NEDD8-202ENST00000396828 CHPT1Q8WUD6 406 aa8.3□□□□□ -1.08
NEDD8-202ENST00000396828 CORO2AQ92828 525 aa8.3□□□□□ -1.08
NEDD8-202ENST00000396828 ARL11Q969Q4 196 aa8.3□□□□□ -1.08
NEDD8-202ENST00000396828 KIRREL1Q96J84 757 aa8.3□□□□□ -1.08
NEDD8-202ENST00000396828 SLC2A8Q9NY64 477 aa8.3□□□□□ -1.08
NEDD8-202ENST00000396828 TAS2R3Q9NYW6 316 aa8.3□□□□□ -1.08
NEDD8-202ENST00000396828 KBTBD11-OT1A0A1B0GTJ5 212 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 C17orf98A8MV24 154 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 VGLL3A8MV65 326 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 HBZP02008 142 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 ZNF735P0CB33 412 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 FCGR2CP31995 323 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 BTCP35070 178 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 ECI1P42126 302 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 BLCAPP62952 87 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 HTD2P86397 168 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 OXA1LQ15070 435 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 SSX2Q16385 188 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 TMEM30BQ3MIR4 351 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 IGSF11Q5DX21 431 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 DHRS11Q6UWP2 260 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 TCF23Q7RTU1 214 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 DUSP18Q8NEJ0 188 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 TERB2Q8NHR7 220 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 GIMAP1Q8WWP7 306 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 SCGB3A2Q96PL1 93 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 CITED2Q99967 270 aaPredicted RBP8.29□□□□□ -1.08
NEDD8-202ENST00000396828 SLC25A21Q9BQT8 299 aaPredicted RBP8.29□□□□□ -1.08
NEDD8-202ENST00000396828 ZNF2Q9BSG1 426 aaPredicted RBP8.29□□□□□ -1.08
NEDD8-202ENST00000396828 CABLES2Q9BTV7 478 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 KRTAP3-3Q9BYR6 98 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 KRTAP3-2Q9BYR7 98 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 RANBP3Q9H6Z4 567 aaPredicted RBP8.29□□□□□ -1.08
NEDD8-202ENST00000396828 HEXA-AS1Q9H8Q6 139 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 CALYQ9NYX4 217 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 SLC23A1Q9UHI7 598 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 TCF19Q9Y242 345 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 NUBP2Q9Y5Y2 271 aa8.29□□□□□ -1.08
NEDD8-202ENST00000396828 TRBV6-7A0A0A0MS04 114 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 hCG_1809904A0A1W2PP81 198 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 A0A1W2PPE2 198 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 A0A1W2PR64 198 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 A0A1W2PRV1 198 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 FAM172BPA6NC97 362 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 A6NDX4 124 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 ODF3BA8MYP8 253 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 NPIPB11E5RHQ5 1161 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 C15orf65H3BRN8 121 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 RGS11O94810 467 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 NDUFB6O95139 128 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 TCRBP04435 133 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 ARG1P05089 322 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 SSTR5P35346 364 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 CEACAM6P40199 344 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 LGALS4P56470 323 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 HERV-K104P61576 105 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 Q8N2B8 174 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 CENPSQ8N2Z9 138 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 OR10A7Q8NGE5 316 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 OR1L1Q8NH94 360 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 CREB3L1Q96BA8 519 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 ZNF714Q96N38 554 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 NPFFR1Q9GZQ6 430 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 OR2S2Q9NQN1 319 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 NUDT15Q9NV35 164 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 JPT1Q9UK76 154 aa8.28□□□□□ -1.08
NEDD8-202ENST00000396828 IGKV1-6A0A0C4DH72 117 aa8.27□□□□□ -1.09
NEDD8-202ENST00000396828 F2RL2O00254 374 aa8.27□□□□□ -1.09
NEDD8-202ENST00000396828 FBXO24O75426 580 aa8.27□□□□□ -1.09
NEDD8-202ENST00000396828 ZNF728P0DKX0 622 aa8.27□□□□□ -1.09
NEDD8-202ENST00000396828 CGB3P0DN86 165 aa8.27□□□□□ -1.09
NEDD8-202ENST00000396828 CGB7P0DN87 165 aa8.27□□□□□ -1.09
NEDD8-202ENST00000396828 NFYAP23511 347 aaPredicted RBP8.27□□□□□ -1.09
NEDD8-202ENST00000396828 SURF2Q15527 256 aaPredicted RBP8.27□□□□□ -1.09
NEDD8-202ENST00000396828 C17orf58Q2M2W7 97 aa8.27□□□□□ -1.09
NEDD8-202ENST00000396828 ZNF626Q68DY1 528 aa8.27□□□□□ -1.09
NEDD8-202ENST00000396828 LPCAT3Q6P1A2 487 aa8.27□□□□□ -1.09
NEDD8-202ENST00000396828 C11orf88Q6PI97 169 aa8.27□□□□□ -1.09
NEDD8-202ENST00000396828 H1FOOQ8IZA3 346 aaPredicted RBP8.27□□□□□ -1.09
NEDD8-202ENST00000396828 RFESDQ8TAC1 157 aa8.27□□□□□ -1.09
NEDD8-202ENST00000396828 UBALD1Q8TB05 177 aa8.27□□□□□ -1.09
NEDD8-202ENST00000396828 WNT10AQ9GZT5 417 aa8.27□□□□□ -1.09
NEDD8-202ENST00000396828 C20orf85Q9H1P6 137 aa8.27□□□□□ -1.09
NEDD8-202ENST00000396828 LINC00574Q9H8X3 128 aa8.27□□□□□ -1.09
NEDD8-202ENST00000396828 RAB18Q9NP72 206 aa8.27□□□□□ -1.09
NEDD8-202ENST00000396828 AURKAIP1Q9NWT8 199 aaPredicted RBP8.27□□□□□ -1.09
NEDD8-202ENST00000396828 IDI2-AS1Q9NZ38 188 aa8.27□□□□□ -1.09
NEDD8-202ENST00000396828 GNG12Q9UBI6 72 aa8.27□□□□□ -1.09
NEDD8-202ENST00000396828 RYR3Q15413 4870 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms