RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 TYMSP04818 313 aa9.05□□□□□ -0.96
COL4A4-201ENST00000396625 SERF2P84101 59 aa9.05□□□□□ -0.96
COL4A4-201ENST00000396625 TRAV8-2A0A0B4J237 113 aa9.05□□□□□ -0.96
COL4A4-201ENST00000396625 TRAV12-3A0A0B4J271 114 aa9.05□□□□□ -0.96
COL4A4-201ENST00000396625 J3QR06 171 aa9.05□□□□□ -0.96
COL4A4-201ENST00000396625 TGFAP01135 160 aa9.05□□□□□ -0.96
COL4A4-201ENST00000396625 PRSS27Q9BQR3 290 aa9.05□□□□□ -0.96
COL4A4-201ENST00000396625 OR5AC2Q9NZP5 309 aa9.05□□□□□ -0.96
COL4A4-201ENST00000396625 ZNF205O95201 554 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 TMEM50AO95807 157 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 PIGYQ3MUY2 71 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 WFDC5Q8TCV5 224 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 MRGPRX3Q96LB0 322 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 MRGPRX1Q96LB2 322 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 TNRC6CQ9HCJ0 1690 aaKnown RBP9.04□□□□□ -0.96
COL4A4-201ENST00000396625 OR2K2Q8NGT1 345 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 TNFSF10P50591 281 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 MDP1Q86V88 176 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 ST6GALNAC3Q8NDV1 305 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 CLDN16Q9Y5I7 305 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 IGHV3OR15-7A0A075B7D8 119 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 NPFFO15130 113 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 ERGP11308 486 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 HOXB1P14653 301 aaPredicted RBP9.04□□□□□ -0.96
COL4A4-201ENST00000396625 ACVR1Q04771 509 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 MMDQ15546 238 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 PQLC2Q6ZP29 291 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 MARVELD3Q96A59 401 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 ELSPBP1Q96BH3 223 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 C10orf35Q96D05 121 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 KIAA1549Q9HCM3 1950 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 KLKB1P03952 638 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 CTLA4P16410 223 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 OR6X1Q8NH79 312 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 WIPI1Q5MNZ9 446 aaPredicted RBP9.04□□□□□ -0.96
COL4A4-201ENST00000396625 ANKRD33Q7Z3H0 272 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 TRBV23-1A0A0A0MS06 115 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 OR11H12B2RN74 326 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 FFAR1O14842 300 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 OR2A4O95047 310 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 PAPPA-AS1Q5QFB9 102 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 OR11H1Q8NG94 326 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 OR11H2Q8NH07 326 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 GNRHR2Q96P88 292 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 OR2A7Q96R45 310 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 HCFC1P51610 2035 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 SIPA1L1O43166 1804 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 KIAA1551Q9HCM1 1747 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 CTDSPLO15194 276 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 SIGLEC5O15389 551 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 CTSSP25774 331 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 ATP6V0CP27449 155 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 GUCA2BQ16661 112 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 DDB2Q92466 427 aa9.04□□□□□ -0.96
COL4A4-201ENST00000396625 K7N7A8 449 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 HYAL3O43820 417 aaPredicted RBP9.03□□□□□ -0.96
COL4A4-201ENST00000396625 SEC11BP0C7V7 166 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 TMEM170BQ5T4T1 132 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 FBXO46Q6PJ61 603 aaPredicted RBP9.03□□□□□ -0.96
COL4A4-201ENST00000396625 PLA2G3Q9NZ20 509 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 DSPPQ9NZW4 1301 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 TRAV8-6A0A0B4J262 113 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 KLF9Q13886 244 aaPredicted RBP9.03□□□□□ -0.96
COL4A4-201ENST00000396625 CCDC144NLQ6NUI1 221 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 TCF23Q7RTU1 214 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 OR5AN1Q8NGI8 311 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 MRPL24Q96A35 216 aaKnown RBP9.03□□□□□ -0.96
COL4A4-201ENST00000396625 TRBV7-9A0A0J9YWB2 115 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 SLC25A20O43772 301 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 BIVMQ86UB2 503 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 DNASE2BQ8WZ79 361 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 SSBP4Q9BWG4 385 aaPredicted RBP9.03□□□□□ -0.96
COL4A4-201ENST00000396625 AICDAQ9GZX7 198 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 A0A1B0GTH9 108 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 A0A1W2PQM1 296 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 TFPI2P48307 235 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 CX3CL1P78423 397 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 QTRT1Q9BXR0 403 aaKnown RBP9.03□□□□□ -0.96
COL4A4-201ENST00000396625 IGHV4-39P01824 125 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 CD3EP07766 207 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 CCL4L1Q8NHW4 92 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 MPC1Q9Y5U8 109 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 GRIFINA4D1Z8 144 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 PCMT1P22061 227 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 PSG9Q00887 426 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 FXYD3Q14802 87 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 SCNM1Q9BWG6 230 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 FSCN3Q9NQT6 498 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 TMIGD3P0DMS9 266 aaPredicted RBP9.03□□□□□ -0.96
COL4A4-201ENST00000396625 V9GYH0 126 aa9.03□□□□□ -0.96
COL4A4-201ENST00000396625 NEUROG1Q92886 237 aa9.02□□□□□ -0.96
COL4A4-201ENST00000396625 CNRIP1Q96F85 164 aaPredicted RBP9.02□□□□□ -0.96
COL4A4-201ENST00000396625 ZNF714Q96N38 554 aa9.02□□□□□ -0.96
COL4A4-201ENST00000396625 CCL28Q9NRJ3 127 aa9.02□□□□□ -0.96
COL4A4-201ENST00000396625 NAV3Q8IVL0 2385 aa9.02□□□□□ -0.96
COL4A4-201ENST00000396625 H3BRM9 83 aa9.02□□□□□ -0.97
COL4A4-201ENST00000396625 CCL7P80098 99 aa9.02□□□□□ -0.97
COL4A4-201ENST00000396625 NAAAQ02083 359 aa9.02□□□□□ -0.97
COL4A4-201ENST00000396625 TMEM211Q6ICI0 200 aa9.02□□□□□ -0.97
COL4A4-201ENST00000396625 TOX2Q96NM4 488 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms