RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 PIP4P1Q86T03 277 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 CPEB3Q8NE35 698 aaKnown RBP8.34□□□□□ -1.07
TRIM39-203ENST00000396547 SGMS2Q8NHU3 365 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 RARRES3Q9UL19 164 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 ATP23Q9Y6H3 246 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 USF3Q68DE3 2245 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 TRAV38-1A0A0B4J264 116 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 TRAV34A0A0B4J273 112 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 DLEU1O43261 78 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 SERPINA7P05543 415 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 OR10J1P30954 320 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 ATP5G3P48201 142 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 SERF2P84101 59 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 ACTL10Q5JWF8 245 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 C1orf194Q5T5A4 169 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 ASCL4Q6XD76 172 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 ABHD3Q8WU67 409 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 HSPB9Q9BQS6 159 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 SAMD10Q9BYL1 202 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 TUBG2Q9NRH3 451 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 VAMP5O95183 116 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 NGFP01138 241 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 CBLN1P23435 193 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 COL8A2P25067 703 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 G6PCP35575 357 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 TNFSF10P50591 281 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 PPP1CBP62140 327 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 CMTM2Q8TAZ6 248 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 PINX1Q96BK5 328 aaKnown RBP8.34□□□□□ -1.07
TRIM39-203ENST00000396547 NEIL1Q96FI4 390 aaPredicted RBP8.34□□□□□ -1.07
TRIM39-203ENST00000396547 FGF23Q9GZV9 251 aaPredicted RBP8.34□□□□□ -1.07
TRIM39-203ENST00000396547 TRAPPC2LQ9UL33 140 aa8.34□□□□□ -1.07
TRIM39-203ENST00000396547 LOC102725191A0A1B0GVB3 256 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 ETV2O00321 342 aaPredicted RBP8.33□□□□□ -1.08
TRIM39-203ENST00000396547 GLB1P16278 677 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 NPPCP23582 126 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 CEACAM6P40199 344 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 EDDM3BP56851 147 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 KRTDAPP60985 99 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 SPATA46Q5T0L3 261 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 TMEM42Q69YG0 159 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 PCSK4Q6UW60 755 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 BAGE3Q86Y29 109 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 BAGE2Q86Y30 109 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 TGIF2LYQ8IUE0 185 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 ZNF114Q8NC26 417 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 DTD1Q8TEA8 209 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 ZDHHC16Q969W1 377 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 PLPPR2Q96GM1 343 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 ABHD14BQ96IU4 210 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 PYGO2Q9BRQ0 406 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 ZNF552Q9H707 407 aaPredicted RBP8.33□□□□□ -1.08
TRIM39-203ENST00000396547 COL27A1Q8IZC6 1860 aaPredicted RBP8.33□□□□□ -1.08
TRIM39-203ENST00000396547 DUXBA0A1W2PPF3 345 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 OR6C6A6NF89 314 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 ADMP35318 185 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 CDKN1AP38936 164 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 GNG10P50151 68 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 CLDN15P56746 228 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 LINC00205P59089 165 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 WIPI1Q5MNZ9 446 aaPredicted RBP8.33□□□□□ -1.08
TRIM39-203ENST00000396547 FGFRL1Q8N441 504 aa8.33□□□□□ -1.08
TRIM39-203ENST00000396547 CISD2Q8N5K1 135 aaKnown RBP8.33□□□□□ -1.08
TRIM39-203ENST00000396547 RYDENQ9NUL5 291 aaKnown RBP8.33□□□□□ -1.08
TRIM39-203ENST00000396547 A0A0G2JMM0 328 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 A0A1W2PPB8 328 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 A0A1W2PRS3 328 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 KIR3DP1A8MWS1 328 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 RAB4AP20338 218 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 TRA2AQ13595 282 aaKnown RBP eCLIP8.32□□□□□ -1.08
TRIM39-203ENST00000396547 C17orf82Q86X59 251 aaPredicted RBP8.32□□□□□ -1.08
TRIM39-203ENST00000396547 FADS6Q8N9I5 356 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 PSMG3Q9BT73 122 aaPredicted RBP8.32□□□□□ -1.08
TRIM39-203ENST00000396547 DOCK10Q96BY6 2186 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 RHBDL1O75783 438 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 LIFP15018 202 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 FOXG1P55316 489 aaPredicted RBP8.32□□□□□ -1.08
TRIM39-203ENST00000396547 FGF12P61328 243 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 COA6Q5JTJ3 125 aaKnown RBP8.32□□□□□ -1.08
TRIM39-203ENST00000396547 ZNF324BQ6AW86 544 aaPredicted RBP8.32□□□□□ -1.08
TRIM39-203ENST00000396547 CLEC2AQ6UVW9 174 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 ANAPC16Q96DE5 110 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 OPN3Q9H1Y3 402 aaPredicted RBP8.32□□□□□ -1.08
TRIM39-203ENST00000396547 AHCTF1Q8WYP5 2266 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 CTXND1A0A1B0GTU2 59 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 F2Z2F3 143 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 SLC17A3O00476 420 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 DEGS1O15121 323 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 ZG16O60844 167 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 RAMP3O60896 148 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 CTXN2P0C2S0 81 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 RAC2P15153 192 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 SLC35B1P78383 322 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 GUSBP11Q6P575 273 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 ZCCHC14Q8WYQ9 949 aaKnown RBP8.32□□□□□ -1.08
TRIM39-203ENST00000396547 VAMP8Q9BV40 100 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 CHRNA10Q9GZZ6 450 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 TMEM9BQ9NQ34 198 aa8.32□□□□□ -1.08
TRIM39-203ENST00000396547 C19orf25Q9UFG5 118 aaPredicted RBP8.32□□□□□ -1.08
TRIM39-203ENST00000396547 DNAJC13O75165 2243 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms