RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 SSX6Q7RTT6 188 aa10.25□□□□□ -0.77
VCPKMT-201ENST00000395859 NPBQ8NG41 125 aa10.25□□□□□ -0.77
VCPKMT-201ENST00000395859 PHLDA1Q8WV24 401 aaPredicted RBP10.25□□□□□ -0.77
VCPKMT-201ENST00000395859 ACOT12Q8WYK0 555 aa10.25□□□□□ -0.77
VCPKMT-201ENST00000395859 SLC25A46Q96AG3 418 aa10.25□□□□□ -0.77
VCPKMT-201ENST00000395859 KCTD12Q96CX2 325 aaKnown RBP10.25□□□□□ -0.77
VCPKMT-201ENST00000395859 DCUN1D5Q9BTE7 237 aa10.25□□□□□ -0.77
VCPKMT-201ENST00000395859 SLIRPQ9GZT3 109 aaKnown RBP10.25□□□□□ -0.77
VCPKMT-201ENST00000395859 ISG20L2Q9H9L3 353 aaKnown RBP10.25□□□□□ -0.77
VCPKMT-201ENST00000395859 ADAM30Q9UKF2 790 aa10.25□□□□□ -0.77
VCPKMT-201ENST00000395859 TRAV39A0A0B4J263 110 aa10.24□□□□□ -0.77
VCPKMT-201ENST00000395859 OR11H12B2RN74 326 aa10.24□□□□□ -0.77
VCPKMT-201ENST00000395859 DEGS1O15121 323 aa10.24□□□□□ -0.77
VCPKMT-201ENST00000395859 NDUFB8O95169 186 aa10.24□□□□□ -0.77
VCPKMT-201ENST00000395859 ZNF134P52741 427 aa10.24□□□□□ -0.77
VCPKMT-201ENST00000395859 MTCP1P56278 107 aa10.24□□□□□ -0.77
VCPKMT-201ENST00000395859 SYNJ2BPP57105 145 aa10.24□□□□□ -0.77
VCPKMT-201ENST00000395859 ODF4Q2M2E3 257 aa10.24□□□□□ -0.77
VCPKMT-201ENST00000395859 Q3ZCU0 254 aa10.24□□□□□ -0.77
VCPKMT-201ENST00000395859 ZNF660Q6AZW8 331 aaPredicted RBP10.24□□□□□ -0.77
VCPKMT-201ENST00000395859 LIN54Q6MZP7 749 aa10.24□□□□□ -0.77
VCPKMT-201ENST00000395859 RDH10Q8IZV5 341 aa10.24□□□□□ -0.77
VCPKMT-201ENST00000395859 MCFD2Q8NI22 146 aa10.24□□□□□ -0.77
VCPKMT-201ENST00000395859 PGLYRP3Q96LB9 341 aa10.24□□□□□ -0.77
VCPKMT-201ENST00000395859 CENPOQ9BU64 300 aa10.24□□□□□ -0.77
VCPKMT-201ENST00000395859 CST11Q9H112 138 aa10.24□□□□□ -0.77
VCPKMT-201ENST00000395859 GFOD1Q9NXC2 390 aa10.24□□□□□ -0.77
VCPKMT-201ENST00000395859 SLC23A1Q9UHI7 598 aa10.24□□□□□ -0.77
VCPKMT-201ENST00000395859 GNG8Q9UK08 70 aa10.24□□□□□ -0.77
VCPKMT-201ENST00000395859 GABRPO00591 440 aa10.23□□□□□ -0.77
VCPKMT-201ENST00000395859 NBR2O15453 112 aa10.23□□□□□ -0.77
VCPKMT-201ENST00000395859 LALBAP00709 142 aa10.23□□□□□ -0.77
VCPKMT-201ENST00000395859 PRKACBP22694 351 aa10.23□□□□□ -0.77
VCPKMT-201ENST00000395859 MYL9P24844 172 aa10.23□□□□□ -0.77
VCPKMT-201ENST00000395859 IL3RAP26951 378 aa10.23□□□□□ -0.77
VCPKMT-201ENST00000395859 ETV6P41212 452 aa10.23□□□□□ -0.77
VCPKMT-201ENST00000395859 ZNF45Q02386 682 aa10.23□□□□□ -0.77
VCPKMT-201ENST00000395859 ALKBH1Q13686 389 aaKnown RBP10.23□□□□□ -0.77
VCPKMT-201ENST00000395859 GHSRQ92847 366 aa10.23□□□□□ -0.77
VCPKMT-201ENST00000395859 ADAT3Q96EY9 351 aaPredicted RBP10.23□□□□□ -0.77
VCPKMT-201ENST00000395859 BARHL1Q9BZE3 327 aa10.23□□□□□ -0.77
VCPKMT-201ENST00000395859 SLA2Q9H6Q3 261 aa10.23□□□□□ -0.77
VCPKMT-201ENST00000395859 PLGRKTQ9HBL7 147 aa10.23□□□□□ -0.77
VCPKMT-201ENST00000395859 RABL2AQ9UBK7 228 aaPredicted RBP10.23□□□□□ -0.77
VCPKMT-201ENST00000395859 RABL2BQ9UNT1 228 aa10.23□□□□□ -0.77
VCPKMT-201ENST00000395859 MYCBP2O75592 4640 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 LOC107986453A0A1B0GWG9 222 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 HSPB6O14558 160 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 PDCD5O14737 125 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 RTL8CO15255 209 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 ISG15P05161 165 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 ATF1P18846 271 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 PTBP1P26599 531 aaKnown RBP eCLIP10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 CD40LGP29965 261 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 SCAND1P57086 179 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 TPPP2P59282 170 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 RPS25P62851 125 aaKnown RBP10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 CX3CL1P78423 397 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 FABP5Q01469 135 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 ZNF846Q147U1 533 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 MOGAT2Q3SYC2 334 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 CD300EQ496F6 205 aaPredicted RBP10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 TP53I3Q53FA7 332 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 AKIRIN2Q53H80 203 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 MZT2AQ6P582 158 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 UTS2BQ765I0 119 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 SAXO1Q8IYX7 474 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 PRSS35Q8N3Z0 413 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 OR2G2Q8NGZ5 317 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 OR5AK2Q8NH90 309 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 BORCS5Q969J3 196 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 RFT1Q96AA3 541 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 CMTM3Q96MX0 182 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 MS4A10Q96PG2 267 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 NEK6Q9HC98 313 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 SLC2A8Q9NY64 477 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 TP53TG1Q9Y2A0 90 aa10.22□□□□□ -0.77
VCPKMT-201ENST00000395859 LANCL1O43813 399 aa10.21□□□□□ -0.77
VCPKMT-201ENST00000395859 UCHL1P09936 223 aa10.21□□□□□ -0.77
VCPKMT-201ENST00000395859 ZNF20P17024 532 aa10.21□□□□□ -0.77
VCPKMT-201ENST00000395859 KCNJ3P48549 501 aa10.21□□□□□ -0.77
VCPKMT-201ENST00000395859 LSM3P62310 102 aaKnown RBP10.21□□□□□ -0.77
VCPKMT-201ENST00000395859 DYRK1AQ13627 763 aa10.21□□□□□ -0.77
VCPKMT-201ENST00000395859 Q499Y3 187 aa10.21□□□□□ -0.77
VCPKMT-201ENST00000395859 ACTBL2Q562R1 376 aa10.21□□□□□ -0.77
VCPKMT-201ENST00000395859 PAN3Q58A45 887 aaKnown RBP10.21□□□□□ -0.77
VCPKMT-201ENST00000395859 CT45A1Q5HYN5 189 aa10.21□□□□□ -0.77
VCPKMT-201ENST00000395859 C22orf42Q6IC83 251 aa10.21□□□□□ -0.77
VCPKMT-201ENST00000395859 TMEM91Q6ZNR0 172 aa10.21□□□□□ -0.77
VCPKMT-201ENST00000395859 CT45A3Q8NHU0 189 aa10.21□□□□□ -0.77
VCPKMT-201ENST00000395859 GPR148Q8TDV2 347 aa10.21□□□□□ -0.77
VCPKMT-201ENST00000395859 SPSB1Q96BD6 273 aa10.21□□□□□ -0.77
VCPKMT-201ENST00000395859 GGTLC1Q9BX51 225 aa10.21□□□□□ -0.77
VCPKMT-201ENST00000395859 ZC4H2Q9NQZ6 224 aa10.21□□□□□ -0.77
VCPKMT-201ENST00000395859 FCN1O00602 326 aa10.2□□□□□ -0.78
VCPKMT-201ENST00000395859 CD2P06729 351 aa10.2□□□□□ -0.78
VCPKMT-201ENST00000395859 OCM2P0CE71 109 aa10.2□□□□□ -0.78
VCPKMT-201ENST00000395859 OCMP0CE72 109 aaPredicted RBP10.2□□□□□ -0.78
VCPKMT-201ENST00000395859 GZMHP20718 246 aa10.2□□□□□ -0.78
VCPKMT-201ENST00000395859 RPS19P39019 145 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms