RNA–Protein interactions for RNA: ENST00000395740.5

FGD4-201, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 1 (best)

Gene FGD4, Length 2,691 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-201ENST00000395740 ZDBF2Q9HCK1 2354 aa4.3□□□□□ -1.72
FGD4-201ENST00000395740 KMT2EQ8IZD2 1858 aa4.3□□□□□ -1.72
FGD4-201ENST00000395740 CCDC163A0A0D9SF12 145 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 EREGO14944 169 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 SCRG1O75711 98 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 KRASP01116 189 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 IGKV1-39P01597 117 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 IGKV1-5P01602 117 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 IGKV1D-39P04432 117 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 PSG2P11465 335 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 ARR3P36575 388 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 SSR4P51571 173 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 TPPP2P59282 170 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 IL11RAQ14626 422 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 TRIP6Q15654 476 aaKnown RBP4.29□□□□□ -1.72
FGD4-201ENST00000395740 IGFBP7Q16270 282 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 ZNF585BQ52M93 769 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 PDLIM3Q53GG5 364 aaPredicted RBP4.29□□□□□ -1.72
FGD4-201ENST00000395740 SSX7Q7RTT5 188 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.29□□□□□ -1.72
FGD4-201ENST00000395740 OR56B2PQ8NGI1 322 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 ORAOV1Q8WV07 137 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 PSMF1Q92530 271 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 DYRK2Q92630 601 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 NAT6Q93015 286 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 CDX2Q99626 313 aaPredicted RBP4.29□□□□□ -1.72
FGD4-201ENST00000395740 VSIRQ9H7M9 311 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 SEPSECSQ9HD40 501 aaKnown RBP4.29□□□□□ -1.72
FGD4-201ENST00000395740 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.29□□□□□ -1.72
FGD4-201ENST00000395740 ZNF581Q9P0T4 197 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 POLR3KQ9Y2Y1 108 aaPredicted RBP4.29□□□□□ -1.72
FGD4-201ENST00000395740 CHD3Q12873 2000 aaKnown RBP4.29□□□□□ -1.72
FGD4-201ENST00000395740 ASXL3Q9C0F0 2248 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 IGHV1-45A0A0A0MS14 117 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 LRRC3CA6NJW4 275 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 ZNF705GA8MUZ8 300 aaPredicted RBP4.29□□□□□ -1.72
FGD4-201ENST00000395740 C9JCJ5 164 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 PDGFBP01127 241 aaPredicted RBP4.29□□□□□ -1.72
FGD4-201ENST00000395740 IGLV2-14P01704 120 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 IL3RAP26951 378 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 TMPRSS3P57727 454 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 CARD18P57730 90 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 MLF1P58340 268 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 GNG3P63215 75 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 RPP30P78346 268 aaKnown RBP4.29□□□□□ -1.72
FGD4-201ENST00000395740 TMEM267Q0VDI3 215 aaPredicted RBP4.29□□□□□ -1.72
FGD4-201ENST00000395740 EIF4EBP1Q13541 118 aaPredicted RBP4.29□□□□□ -1.72
FGD4-201ENST00000395740 Q6ZRM9 215 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 NUFIP2Q7Z417 695 aaKnown RBP4.29□□□□□ -1.72
FGD4-201ENST00000395740 LINC01551Q86U37 167 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 OR10G9Q8NGN4 311 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 OR10G7Q8NGN6 311 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 THAP3Q8WTV1 239 aaPredicted RBP4.29□□□□□ -1.72
FGD4-201ENST00000395740 ZNF703Q9H7S9 590 aaPredicted RBP4.29□□□□□ -1.72
FGD4-201ENST00000395740 ELOVL5Q9NYP7 299 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 MTCH1Q9NZJ7 389 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 FUT9Q9Y231 359 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 TRAPPC1Q9Y5R8 145 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 FREM2Q5SZK8 3169 aa4.29□□□□□ -1.72
FGD4-201ENST00000395740 FNDC10F2Z333 226 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 MT-ND6P03923 174 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 OR10J4P0C629 311 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 GLI4P10075 376 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 SRFP11831 508 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 AREGP15514 252 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 CD82P27701 267 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 HOXC12P31275 282 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 MPLP40238 635 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 ARF6P62330 175 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 CATR1Q13166 79 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 TRA2AQ13595 282 aaKnown RBP eCLIP4.28□□□□□ -1.72
FGD4-201ENST00000395740 P2RY6Q15077 328 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 TESK1Q15569 626 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 TMEM183BQ1AE95 376 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 RAET1LQ5VY80 246 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 CYB5R2Q6BCY4 276 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 Q6P435 159 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 ACSM6Q6P461 480 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 ZNF497Q6ZNH5 498 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 GGNQ86UU5 652 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 FAM58AQ8N1B3 248 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 ZNF709Q8N972 641 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 OR10P1Q8NGE3 313 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 OR52E5Q8NH55 327 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 MS4A10Q96PG2 267 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 SRXN1Q9BYN0 137 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 DLL3Q9NYJ7 618 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 ERRFI1Q9UJM3 462 aaPredicted RBP4.28□□□□□ -1.72
FGD4-201ENST00000395740 KIAA2026Q5HYC2 2103 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 ARID1BQ8NFD5 2236 aaPredicted RBP4.28□□□□□ -1.72
FGD4-201ENST00000395740 TRAV39A0A0B4J263 110 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 TRAV24A0A0B4J272 114 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 NKX6-3A6NJ46 265 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 LRRC30A6NM36 301 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 J3QT63 122 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 SLC33A1O00400 549 aaPredicted RBP4.28□□□□□ -1.72
FGD4-201ENST00000395740 CLDN14O95500 239 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 HPRT1P00492 218 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 IGKV1D-33P01593 117 aa4.28□□□□□ -1.72
FGD4-201ENST00000395740 IGKV1-33P01594 117 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms