RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 CLDN17P56750 224 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 PSG9Q00887 426 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 CATR1Q13166 79 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 ENDOGQ14249 297 aaKnown RBP3.49□□□□□ -1.85
HERC4-204ENST00000395198 LGALSLQ3ZCW2 172 aaPredicted RBP3.49□□□□□ -1.85
HERC4-204ENST00000395198 UFSP1Q6NVU6 142 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 LRRTM1Q86UE6 522 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 TMEM219Q86XT9 240 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 PRR22Q8IZ63 422 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 CMTM4Q8IZR5 234 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 RBMXL3Q8N7X1 1067 aaKnown RBP3.49□□□□□ -1.85
HERC4-204ENST00000395198 DOK4Q8TEW6 326 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 DERL3Q96Q80 235 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 NOX3Q9HBY0 568 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 NTMQ9P121 344 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 AHCTF1Q8WYP5 2266 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 SCN7AQ01118 1682 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 FAM183AA6NL82 134 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 TMEM212A6NML5 194 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 B4DEV8 164 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 APOC4-APOC2K7ER74 178 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 CDRT1O95170 752 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 SOX14O95416 240 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 IGHMP01871 453 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 APOC2P02655 101 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 DBIP07108 87 aaKnown RBP3.49□□□□□ -1.85
HERC4-204ENST00000395198 IGLC1P0CG04 106 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 BCKDHAP12694 445 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 LIFP15018 202 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 RAB5AP20339 215 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 NFYBP25208 207 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 PPP1CBP62140 327 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 SLC35A2P78381 396 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 C8orf82Q6P1X6 216 aaPredicted RBP3.49□□□□□ -1.85
HERC4-204ENST00000395198 ZNF549Q6P9A3 640 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 DEFB119Q8N690 84 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 OR4K17Q8NGC6 315 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 RAB2BQ8WUD1 216 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 PNPLA2Q96AD5 504 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 YPEL4Q96NS1 127 aa3.49□□□□□ -1.85
HERC4-204ENST00000395198 EXOSC4Q9NPD3 245 aaKnown RBP3.49□□□□□ -1.85
HERC4-204ENST00000395198 ODAMA1E959 279 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 ARPC2O15144 300 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 MRPS12O15235 138 aaKnown RBP3.48□□□□□ -1.85
HERC4-204ENST00000395198 CTGFP29279 349 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 TGFBR1P36897 503 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 SLC10A2Q12908 348 aaPredicted RBP3.48□□□□□ -1.85
HERC4-204ENST00000395198 MMDQ15546 238 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 IZUMO4Q1ZYL8 232 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 Q6ZRG5 221 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 PIANPQ8IYJ0 282 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 SAXO1Q8IYX7 474 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 ZNF431Q8TF32 576 aaPredicted RBP3.48□□□□□ -1.85
HERC4-204ENST00000395198 MBD3L1Q8WWY6 194 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 MRPL24Q96A35 216 aaKnown RBP3.48□□□□□ -1.85
HERC4-204ENST00000395198 OR4K3Q96R72 315 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 GPER1Q99527 375 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 TEX101Q9BY14 249 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 C19orf73Q9NVV2 129 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 ASF1AQ9Y294 204 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 POLR1DQ9Y2S0 133 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 RBBP6Q7Z6E9 1792 aaKnown RBP3.48□□□□□ -1.85
HERC4-204ENST00000395198 SCN5AQ14524 2016 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 SCN9AQ15858 1988 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 COL2A1P02458 1487 aaPredicted RBP3.48□□□□□ -1.85
HERC4-204ENST00000395198 KDM3BQ7LBC6 1761 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 SMKR1H3BMG3 65 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 PGA4P0DJD7 388 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 PGA3P0DJD8 388 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 PGA5P0DJD9 388 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 IGFBP6P24592 240 aaPredicted RBP3.48□□□□□ -1.85
HERC4-204ENST00000395198 RNASE12Q5GAN4 147 aaKnown RBP3.48□□□□□ -1.85
HERC4-204ENST00000395198 TCEAL5Q5H9L2 206 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 PAPPA-AS1Q5QFB9 102 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 C20orf204Q6ZNR8 217 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 CLEC20AQ6ZU45 233 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 NPWQ8N729 165 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 GPR26Q8NDV2 337 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 KLHDC9Q8NEP7 349 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 OR1L1Q8NH94 360 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 GPHA2Q96T91 129 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 TBL1YQ9BQ87 522 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 MED31Q9Y3C7 131 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 MPPED1O15442 326 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 HCRTO43612 131 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 OR2H2O95918 312 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 SCTP09683 121 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 CTLA4P16410 223 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 PTH2RP49190 550 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 UBA52P62987 128 aaKnown RBP3.48□□□□□ -1.85
HERC4-204ENST00000395198 SP6Q3SY56 376 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 GGNBP1Q5YKI7 109 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 BCDIN3DQ7Z5W3 292 aaKnown RBP3.48□□□□□ -1.85
HERC4-204ENST00000395198 OR10D3Q8NH80 312 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 NUP210Q8TEM1 1887 aaPredicted RBP3.48□□□□□ -1.85
HERC4-204ENST00000395198 MBD6Q96DN6 1003 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 DCTN5Q9BTE1 182 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 OR51E2Q9H255 320 aa3.48□□□□□ -1.85
HERC4-204ENST00000395198 MARCOQ9UEW3 520 aaPredicted RBP3.48□□□□□ -1.85
HERC4-204ENST00000395198 TBX21Q9UL17 535 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms