RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 PLEKHF2Q9H8W4 249 aa11.7□□□□□ -0.54
SNCA-204ENST00000394989 KCNS2Q9ULS6 477 aa11.7□□□□□ -0.54
SNCA-204ENST00000394989 FAM157AC9JC47 383 aa11.69□□□□□ -0.54
SNCA-204ENST00000394989 IGKV1-5P01602 117 aa11.69□□□□□ -0.54
SNCA-204ENST00000394989 C22orf34Q6ZV56 151 aa11.69□□□□□ -0.54
SNCA-204ENST00000394989 TPRX1Q8N7U7 411 aa11.69□□□□□ -0.54
SNCA-204ENST00000394989 GFOD1Q9NXC2 390 aa11.69□□□□□ -0.54
SNCA-204ENST00000394989 G0S2P27469 103 aa11.69□□□□□ -0.54
SNCA-204ENST00000394989 COL10A1Q03692 680 aa11.69□□□□□ -0.54
SNCA-204ENST00000394989 SSX2Q16385 188 aa11.69□□□□□ -0.54
SNCA-204ENST00000394989 C1orf185Q5T7R7 199 aa11.69□□□□□ -0.54
SNCA-204ENST00000394989 CD177Q8N6Q3 437 aa11.69□□□□□ -0.54
SNCA-204ENST00000394989 ATG101Q9BSB4 218 aa11.69□□□□□ -0.54
SNCA-204ENST00000394989 RBM7Q9Y580 266 aaKnown RBP11.69□□□□□ -0.54
SNCA-204ENST00000394989 PIEZO2Q9H5I5 2752 aa11.69□□□□□ -0.54
SNCA-204ENST00000394989 CST7O76096 145 aa11.69□□□□□ -0.54
SNCA-204ENST00000394989 PPP1CCP36873 323 aaKnown RBP11.69□□□□□ -0.54
SNCA-204ENST00000394989 TIMM23BQ5SRD1 257 aa11.69□□□□□ -0.54
SNCA-204ENST00000394989 OR2Z1Q8NG97 314 aa11.69□□□□□ -0.54
SNCA-204ENST00000394989 OR52L2PQ8NGH6 319 aa11.69□□□□□ -0.54
SNCA-204ENST00000394989 OR5C1Q8NGR4 320 aa11.69□□□□□ -0.54
SNCA-204ENST00000394989 FAM213BQ8TBF2 198 aa11.69□□□□□ -0.54
SNCA-204ENST00000394989 RP1L1Q8IWN7 2480 aaPredicted RBP11.68□□□□□ -0.54
SNCA-204ENST00000394989 A0A1B0GU03 582 aa11.68□□□□□ -0.54
SNCA-204ENST00000394989 M0R1B8 84 aa11.68□□□□□ -0.54
SNCA-204ENST00000394989 SLC25A6P12236 298 aa11.68□□□□□ -0.54
SNCA-204ENST00000394989 EGR1P18146 543 aa11.68□□□□□ -0.54
SNCA-204ENST00000394989 GLIPR1P48060 266 aa11.68□□□□□ -0.54
SNCA-204ENST00000394989 MRGPRDQ8TDS7 321 aa11.68□□□□□ -0.54
SNCA-204ENST00000394989 GALMQ96C23 342 aa11.68□□□□□ -0.54
SNCA-204ENST00000394989 EGLN1Q9GZT9 426 aa11.68□□□□□ -0.54
SNCA-204ENST00000394989 DUSP13Q9UII6 198 aa11.68□□□□□ -0.54
SNCA-204ENST00000394989 SPTBN2O15020 2390 aa11.68□□□□□ -0.54
SNCA-204ENST00000394989 A0A087X0M5 115 aa11.68□□□□□ -0.54
SNCA-204ENST00000394989 A0A1B0GX30 115 aa11.68□□□□□ -0.54
SNCA-204ENST00000394989 PHOX2AO14813 284 aa11.68□□□□□ -0.54
SNCA-204ENST00000394989 HBZP02008 142 aa11.68□□□□□ -0.54
SNCA-204ENST00000394989 SSTR5P35346 364 aa11.68□□□□□ -0.54
SNCA-204ENST00000394989 TIMP3P35625 211 aa11.68□□□□□ -0.54
SNCA-204ENST00000394989 GABRA2P47869 451 aa11.68□□□□□ -0.54
SNCA-204ENST00000394989 VAMP2P63027 116 aa11.68□□□□□ -0.54
SNCA-204ENST00000394989 FAM180AQ6UWF9 173 aa11.68□□□□□ -0.54
SNCA-204ENST00000394989 C1orf174Q8IYL3 243 aa11.68□□□□□ -0.54
SNCA-204ENST00000394989 TMEM217Q8N7C4 229 aa11.68□□□□□ -0.54
SNCA-204ENST00000394989 SNIP1Q8TAD8 396 aaKnown RBP11.68□□□□□ -0.54
SNCA-204ENST00000394989 LRRC29Q8WV35 223 aa11.68□□□□□ -0.54
SNCA-204ENST00000394989 SCRT1Q9BWW7 348 aa11.68□□□□□ -0.54
SNCA-204ENST00000394989 OOEPA6NGQ2 149 aa11.67□□□□□ -0.54
SNCA-204ENST00000394989 MMP9P14780 707 aa11.67□□□□□ -0.54
SNCA-204ENST00000394989 ZNF16P17020 682 aaPredicted RBP11.67□□□□□ -0.54
SNCA-204ENST00000394989 DYNLT3P51808 116 aa11.67□□□□□ -0.54
SNCA-204ENST00000394989 HAGHQ16775 308 aa11.67□□□□□ -0.54
SNCA-204ENST00000394989 TMEM182Q6ZP80 229 aaPredicted RBP11.67□□□□□ -0.54
SNCA-204ENST00000394989 OR13A1Q8NGR1 328 aa11.67□□□□□ -0.54
SNCA-204ENST00000394989 LSM10Q969L4 123 aaKnown RBP11.67□□□□□ -0.54
SNCA-204ENST00000394989 MISP3Q96FF7 219 aa11.67□□□□□ -0.54
SNCA-204ENST00000394989 KCNIP1Q9NZI2 227 aa11.67□□□□□ -0.54
SNCA-204ENST00000394989 CACNG5Q9UF02 275 aa11.67□□□□□ -0.54
SNCA-204ENST00000394989 RNF150Q9ULK6 438 aa11.67□□□□□ -0.54
SNCA-204ENST00000394989 CEP295Q9C0D2 2601 aa11.67□□□□□ -0.54
SNCA-204ENST00000394989 BTBD17A6NE02 478 aa11.67□□□□□ -0.54
SNCA-204ENST00000394989 SNRPCP09234 159 aaKnown RBP11.67□□□□□ -0.54
SNCA-204ENST00000394989 RPS23P62266 143 aaKnown RBP11.67□□□□□ -0.54
SNCA-204ENST00000394989 EIF4EBP1Q13541 118 aaPredicted RBP11.67□□□□□ -0.54
SNCA-204ENST00000394989 SMIM21Q3B7S5 101 aa11.67□□□□□ -0.54
SNCA-204ENST00000394989 SLC25A31Q9H0C2 315 aa11.67□□□□□ -0.54
SNCA-204ENST00000394989 LIN7CQ9NUP9 197 aaKnown RBP11.67□□□□□ -0.54
SNCA-204ENST00000394989 CACNA1DQ01668 2161 aa11.67□□□□□ -0.54
SNCA-204ENST00000394989 H3BP45 60 aa11.67□□□□□ -0.54
SNCA-204ENST00000394989 IFNL4K9M1U5 179 aa11.67□□□□□ -0.54
SNCA-204ENST00000394989 CYB5BO43169 146 aa11.67□□□□□ -0.54
SNCA-204ENST00000394989 TRGC2P03986 189 aa11.67□□□□□ -0.54
SNCA-204ENST00000394989 ATP6V0CP27449 155 aa11.67□□□□□ -0.54
SNCA-204ENST00000394989 CEACAM8P31997 349 aaPredicted RBP11.67□□□□□ -0.54
SNCA-204ENST00000394989 NKX6-1P78426 367 aaPredicted RBP11.67□□□□□ -0.54
SNCA-204ENST00000394989 SOHLH1Q5JUK2 328 aa11.67□□□□□ -0.54
SNCA-204ENST00000394989 ZNF645Q8N7E2 425 aa11.67□□□□□ -0.54
SNCA-204ENST00000394989 OR2D2Q9H210 308 aa11.67□□□□□ -0.54
SNCA-204ENST00000394989 TGIF2-C20orf24A0A0A6YYL0 155 aa11.66□□□□□ -0.54
SNCA-204ENST00000394989 SOX15O60248 233 aa11.66□□□□□ -0.54
SNCA-204ENST00000394989 RAMP3O60896 148 aa11.66□□□□□ -0.54
SNCA-204ENST00000394989 CRYABP02511 175 aaKnown RBP11.66□□□□□ -0.54
SNCA-204ENST00000394989 CXCL1P09341 107 aa11.66□□□□□ -0.54
SNCA-204ENST00000394989 SNCAP37840 140 aa11.66□□□□□ -0.54
SNCA-204ENST00000394989 SSTP61278 116 aa11.66□□□□□ -0.54
SNCA-204ENST00000394989 TLE1Q04724 770 aa11.66□□□□□ -0.54
SNCA-204ENST00000394989 ZNF266Q14584 549 aa11.66□□□□□ -0.54
SNCA-204ENST00000394989 STX12Q86Y82 276 aa11.66□□□□□ -0.54
SNCA-204ENST00000394989 LURAP1Q96LR2 239 aa11.66□□□□□ -0.54
SNCA-204ENST00000394989 DCTN5Q9BTE1 182 aa11.66□□□□□ -0.54
SNCA-204ENST00000394989 ABHD14AQ9BUJ0 271 aa11.66□□□□□ -0.54
SNCA-204ENST00000394989 IGKV1D-17A0A075B6S4 117 aa11.66□□□□□ -0.54
SNCA-204ENST00000394989 ZNF737O75373 536 aa11.66□□□□□ -0.54
SNCA-204ENST00000394989 IGHV3-13P01766 116 aa11.66□□□□□ -0.54
SNCA-204ENST00000394989 SOD3P08294 240 aa11.66□□□□□ -0.54
SNCA-204ENST00000394989 IL2RGP31785 369 aa11.66□□□□□ -0.54
SNCA-204ENST00000394989 TAGLN2P37802 199 aaKnown RBP11.66□□□□□ -0.54
SNCA-204ENST00000394989 CD200P41217 278 aa11.66□□□□□ -0.54
SNCA-204ENST00000394989 BRWD1-AS2P59051 145 aa11.66□□□□□ -0.54
SNCA-204ENST00000394989 RPL30P62888 115 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms