RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 HIST3H2BBQ8N257 126 aa11.27□□□□□ -0.6
NFKB1-202ENST00000394820 SGK494Q96LW2 274 aa11.27□□□□□ -0.6
NFKB1-202ENST00000394820 STRADBQ9C0K7 418 aa11.27□□□□□ -0.6
NFKB1-202ENST00000394820 DEPPQ9NTK1 212 aa11.27□□□□□ -0.6
NFKB1-202ENST00000394820 NAT8Q9UHE5 227 aa11.27□□□□□ -0.6
NFKB1-202ENST00000394820 TECTAO75443 2155 aa11.27□□□□□ -0.61
NFKB1-202ENST00000394820 IER3P46695 156 aa11.27□□□□□ -0.61
NFKB1-202ENST00000394820 TFPI2P48307 235 aa11.27□□□□□ -0.61
NFKB1-202ENST00000394820 ERVK-16P61578 105 aa11.27□□□□□ -0.61
NFKB1-202ENST00000394820 CATR1Q13166 79 aa11.27□□□□□ -0.61
NFKB1-202ENST00000394820 TMEM164Q5U3C3 297 aa11.27□□□□□ -0.61
NFKB1-202ENST00000394820 TMEM211Q6ICI0 200 aa11.27□□□□□ -0.61
NFKB1-202ENST00000394820 CPEB3Q8NE35 698 aaKnown RBP11.27□□□□□ -0.61
NFKB1-202ENST00000394820 RAB24Q969Q5 203 aa11.27□□□□□ -0.61
NFKB1-202ENST00000394820 PMELP40967 661 aa11.27□□□□□ -0.61
NFKB1-202ENST00000394820 SLC10A1Q14973 349 aa11.27□□□□□ -0.61
NFKB1-202ENST00000394820 ATP1A1-AS1Q5TC04 95 aa11.27□□□□□ -0.61
NFKB1-202ENST00000394820 LEAP2Q969E1 77 aa11.27□□□□□ -0.61
NFKB1-202ENST00000394820 WDR54Q9H977 334 aa11.27□□□□□ -0.61
NFKB1-202ENST00000394820 MAGEA5P43359 124 aa11.26□□□□□ -0.61
NFKB1-202ENST00000394820 CDC34P49427 236 aaPredicted RBP11.26□□□□□ -0.61
NFKB1-202ENST00000394820 Q0VFX4 171 aa11.26□□□□□ -0.61
NFKB1-202ENST00000394820 MRPL49Q13405 166 aaKnown RBP11.26□□□□□ -0.61
NFKB1-202ENST00000394820 PPP1R32Q7Z5V6 425 aa11.26□□□□□ -0.61
NFKB1-202ENST00000394820 FGFRL1Q8N441 504 aa11.26□□□□□ -0.61
NFKB1-202ENST00000394820 ZIC4Q8N9L1 334 aa11.26□□□□□ -0.61
NFKB1-202ENST00000394820 GALNT14Q96FL9 552 aa11.26□□□□□ -0.61
NFKB1-202ENST00000394820 PROK2Q9HC23 129 aa11.26□□□□□ -0.61
NFKB1-202ENST00000394820 LAMA5O15230 3695 aa11.26□□□□□ -0.61
NFKB1-202ENST00000394820 SLC17A3O00476 420 aa11.26□□□□□ -0.61
NFKB1-202ENST00000394820 CTXN2P0C2S0 81 aa11.26□□□□□ -0.61
NFKB1-202ENST00000394820 PRSS8Q16651 343 aa11.26□□□□□ -0.61
NFKB1-202ENST00000394820 IQCJQ1A5X6 159 aa11.26□□□□□ -0.61
NFKB1-202ENST00000394820 Q6ZRM9 215 aa11.26□□□□□ -0.61
NFKB1-202ENST00000394820 REC114Q7Z4M0 266 aa11.26□□□□□ -0.61
NFKB1-202ENST00000394820 ZNF573Q86YE8 665 aa11.26□□□□□ -0.61
NFKB1-202ENST00000394820 OR1L1Q8NH94 360 aa11.26□□□□□ -0.61
NFKB1-202ENST00000394820 SIRT7Q9NRC8 400 aa11.26□□□□□ -0.61
NFKB1-202ENST00000394820 NAT8BQ9UHF3 227 aa11.26□□□□□ -0.61
NFKB1-202ENST00000394820 BOKQ9UMX3 212 aaPredicted RBP11.26□□□□□ -0.61
NFKB1-202ENST00000394820 CFAP47Q6ZTR5 3102 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 APELAP0DMC3 54 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 CBLN1P23435 193 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 SLC25A53Q5H9E4 307 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 SPSB3Q6PJ21 355 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 NUFIP2Q7Z417 695 aaKnown RBP11.25□□□□□ -0.61
NFKB1-202ENST00000394820 MRGPRGQ86SM5 289 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 NHLRC2Q8NBF2 726 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 TPPP3Q9BW30 176 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 LIN7CQ9NUP9 197 aaKnown RBP11.25□□□□□ -0.61
NFKB1-202ENST00000394820 TNRC18O15417 2968 aaPredicted RBP11.25□□□□□ -0.61
NFKB1-202ENST00000394820 LRP5LA4QPB2 252 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 M0R1X1 148 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 AGFG2O95081 481 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 OR4A8P0C604 315 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 GNG3P63215 75 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 TFF3Q07654 80 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 M1APQ8TC57 530 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 NEIL1Q96FI4 390 aaPredicted RBP11.25□□□□□ -0.61
NFKB1-202ENST00000394820 HSPB9Q9BQS6 159 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 DCTN5Q9BTE1 182 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 KLF2Q9Y5W3 355 aaPredicted RBP11.25□□□□□ -0.61
NFKB1-202ENST00000394820 ATMQ13315 3056 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 ZFHX2Q9C0A1 2572 aaPredicted RBP11.25□□□□□ -0.61
NFKB1-202ENST00000394820 ELOA3CA0A087WX78 387 aaPredicted RBP11.25□□□□□ -0.61
NFKB1-202ENST00000394820 LOC102723971A0A1B0GUV8 181 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 A8MXE2 369 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 SLC31A2O15432 143 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 LILRA1O75019 489 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 SLC35E3Q7Z769 313 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 TAF15Q92804 592 aaKnown RBP eCLIP11.25□□□□□ -0.61
NFKB1-202ENST00000394820 C18orf12Q96KH6 178 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 OR2J1Q9GZK6 312 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 TMEM9BQ9NQ34 198 aa11.25□□□□□ -0.61
NFKB1-202ENST00000394820 NPIPB13A6NJU9 1138 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 NPIPB4C9JG80 1138 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 WNT9BO14905 357 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 TCF21O43680 179 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 AMTP48728 403 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 ARL16Q0P5N6 197 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 FXYD3Q14802 87 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 ETFRF1Q6IPR1 90 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 H1FOOQ8IZA3 346 aaPredicted RBP11.24□□□□□ -0.61
NFKB1-202ENST00000394820 DTD1Q8TEA8 209 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 APOBEC3DQ96AK3 386 aaPredicted RBP11.24□□□□□ -0.61
NFKB1-202ENST00000394820 GALMQ96C23 342 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 GUCD1Q96NT3 240 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 UHRF2Q96PU4 802 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 M0R143 59 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 CAMPP49913 170 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 RSPO1Q2MKA7 263 aaPredicted RBP11.24□□□□□ -0.61
NFKB1-202ENST00000394820 SIGLECL1Q8N7X8 197 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 SIGLEC12Q96PQ1 595 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 TAAR9Q96RI9 348 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 LRFN3Q9BTN0 628 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 VAMP8Q9BV40 100 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 TM2D1Q9BX74 207 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 FOXJ2Q9P0K8 574 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 SH2D1BO14796 132 aa11.24□□□□□ -0.61
NFKB1-202ENST00000394820 IGHV2-5P01817 119 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms