RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 CNTFRP26992 372 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 MESTQ5EB52 335 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 DCAF12L2Q5VW00 463 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 MAVSQ7Z434 540 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 FAM131CQ96AQ9 280 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 IGHV5-10-1A0A0J9YXX1 117 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 CTLA4P16410 223 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 ZNF146Q15072 292 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 GAB4Q2WGN9 574 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 LINC01465Q8N7H1 131 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 OR4B1Q8NGF8 309 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 QTRT1Q9BXR0 403 aaKnown RBP6.48□□□□□ -1.37
SYNE2-205ENST00000394768 TINAGQ9UJW2 476 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 SCN5AQ14524 2016 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 ATRXP46100 2492 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 PKIAP61925 76 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 CEACAM21Q3KPI0 293 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 CYB5R2Q6BCY4 276 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 FAM57AQ8TBR7 257 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 CLEC7AQ9BXN2 247 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 PTGDSP41222 190 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 SPINK9Q5DT21 86 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 Q6ZS52 159 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 TTTY12Q9BZ98 90 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 LINC01549A6NIU2 74 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 EMP1P54849 157 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 SEZ6L2Q6UXD5 910 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 SNX22Q96L94 193 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 NEU3Q9UQ49 428 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 CGB2Q6NT52 195 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 ADAD2Q8NCV1 583 aaKnown RBP6.48□□□□□ -1.37
SYNE2-205ENST00000394768 MRGPRFQ96AM1 343 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 LOC105371242A0A075B767 164 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 RIMKLAQ8IXN7 391 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 GDF9O60383 454 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 CTSVO60911 334 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 MFAP2P55001 183 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 ZNF600Q6ZNG1 722 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 NEUROG1Q92886 237 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 A0A087X0M5 115 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 A0A1B0GX30 115 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 TMEM229AB2RXF0 380 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 NGFRP08138 427 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 MEF2CQ06413 473 aaPredicted RBP6.48□□□□□ -1.37
SYNE2-205ENST00000394768 NPFFR1Q9GZQ6 430 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 CHD3Q12873 2000 aaKnown RBP6.48□□□□□ -1.37
SYNE2-205ENST00000394768 H7C2G1 150 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 SLC25A17O43808 307 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 THY1P04216 161 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 LDLRAD3Q86YD5 345 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 TUBD1Q9UJT1 453 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 CACNA1IQ9P0X4 2223 aa6.48□□□□□ -1.37
SYNE2-205ENST00000394768 COL22A1Q8NFW1 1626 aaPredicted RBP6.47□□□□□ -1.37
SYNE2-205ENST00000394768 PGPA6NDG6 321 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 LINC01565O15544 149 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 CD74P04233 296 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 WNT1P04628 370 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 IL4P05112 153 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 CCL2P13500 99 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 ZNF137PP52743 207 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 COL10A1Q03692 680 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 DIRC3C9JPN6 131 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 LILRA1O75019 489 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 CTGFP29279 349 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 Q6AWC8 147 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 NEU4Q8WWR8 484 aaPredicted RBP6.47□□□□□ -1.37
SYNE2-205ENST00000394768 FAM27D1Q5T7N8 215 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 NRXN3Q9Y4C0 1643 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 ADAMTSL3P82987 1691 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 GAGE10A6NGK3 116 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 PTP4A3O75365 173 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 AMY1AP04745 511 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 CD5P06127 495 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 PLP1P60201 277 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 RNF133Q8WVZ7 376 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 KMT2EQ8IZD2 1858 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 MARF1Q9Y4F3 1742 aaKnown RBP6.47□□□□□ -1.37
SYNE2-205ENST00000394768 ZNF407Q9C0G0 2248 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 TCRBV5S2A0A599 114 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 ETHE1O95571 254 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 IER3P46695 156 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 UCP2P55851 309 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 POLR2GP62487 172 aaKnown RBP eCLIP6.47□□□□□ -1.37
SYNE2-205ENST00000394768 FAM27BQ5VT28 67 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 MRPL54Q6P161 138 aaKnown RBP6.47□□□□□ -1.37
SYNE2-205ENST00000394768 OR9G1Q8NH87 305 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 CLDND2Q8NHS1 167 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 IL17BQ9UHF5 180 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 HILPDAQ9Y5L2 63 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 NPIPB11E5RHQ5 1161 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 LINC00869P0C866 280 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 BCL2P10415 239 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 RPS27P42677 84 aaKnown RBP6.47□□□□□ -1.37
SYNE2-205ENST00000394768 RBM11P57052 281 aaKnown RBP6.47□□□□□ -1.37
SYNE2-205ENST00000394768 LHX8Q68G74 356 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 OR13C6PQ8NH95 151 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 GP6Q9HCN6 339 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 LEPROTL1O95214 131 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 PPIAL4CA0A0B4J2A2 164 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 ANKRD20A5PA0PJZ0 165 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms