RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 CYB5BO43169 146 aa11.3□□□□□ -0.6
GTF2F1-201ENST00000394456 S1PR2O95136 353 aa11.3□□□□□ -0.6
GTF2F1-201ENST00000394456 CLDN1O95832 211 aa11.3□□□□□ -0.6
GTF2F1-201ENST00000394456 TRGC2P03986 189 aa11.3□□□□□ -0.6
GTF2F1-201ENST00000394456 S100GP29377 79 aa11.3□□□□□ -0.6
GTF2F1-201ENST00000394456 SSTR5P35346 364 aa11.3□□□□□ -0.6
GTF2F1-201ENST00000394456 CD200P41217 278 aa11.3□□□□□ -0.6
GTF2F1-201ENST00000394456 LINC00596Q86U02 117 aa11.3□□□□□ -0.6
GTF2F1-201ENST00000394456 C11orf53Q8IXP5 236 aa11.3□□□□□ -0.6
GTF2F1-201ENST00000394456 SCGB1C1Q8TD33 95 aa11.3□□□□□ -0.6
GTF2F1-201ENST00000394456 MALSU1Q96EH3 234 aa11.3□□□□□ -0.6
GTF2F1-201ENST00000394456 NIPSNAP3BQ9BS92 247 aa11.3□□□□□ -0.6
GTF2F1-201ENST00000394456 OBP2BQ9NPH6 170 aa11.3□□□□□ -0.6
GTF2F1-201ENST00000394456 MIOXQ9UGB7 285 aa11.3□□□□□ -0.6
GTF2F1-201ENST00000394456 DFFBO76075 338 aa11.3□□□□□ -0.6
GTF2F1-201ENST00000394456 BMP5P22003 454 aa11.3□□□□□ -0.6
GTF2F1-201ENST00000394456 KIR2DL2P43627 348 aaPredicted RBP11.3□□□□□ -0.6
GTF2F1-201ENST00000394456 TGFBR3Q03167 851 aa11.3□□□□□ -0.6
GTF2F1-201ENST00000394456 KLF14Q8TD94 323 aaPredicted RBP11.3□□□□□ -0.6
GTF2F1-201ENST00000394456 CDH20Q9HBT6 801 aa11.3□□□□□ -0.6
GTF2F1-201ENST00000394456 DOK5Q9P104 306 aa11.3□□□□□ -0.6
GTF2F1-201ENST00000394456 CEBPZOSA8MTT3 80 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 OR8G1Q15617 311 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 GABRA6Q16445 453 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 CLEC12BQ2HXU8 276 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 LRRC75BQ2VPJ9 315 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 ACSM6Q6P461 480 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 RPP25LQ8N5L8 163 aaKnown RBP11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 CA5BP1Q8WTZ4 195 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 SARAFQ96BY9 339 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 COQ2Q96H96 371 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 OPA3Q9H6K4 179 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 MBNL3Q9NUK0 354 aaKnown RBP11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 BTBD17A6NE02 478 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 PTBP3O95758 552 aaKnown RBP11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 SMIM6P0DI80 62 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 BCL2P10415 239 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 MAS1LP35410 378 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 GLIPR1P48060 266 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 Q6ZT83 130 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 ZADH2Q8N4Q0 377 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 OR8G5Q8NG78 346 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 LSM10Q969L4 123 aaKnown RBP11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 WDR61Q9GZS3 305 aaKnown RBP11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 SLC25A22Q9H936 323 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 ICE1Q9Y2F5 2266 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 OR5H1A6NKK0 313 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 NPIPB11E5RHQ5 1161 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 SH2D1BO14796 132 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 KLK10O43240 276 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 CEACAM4O75871 244 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 HBZP02008 142 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 S100A9P06702 114 aaKnown RBP11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 MDH2P40926 338 aaKnown RBP11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 EIF2S3P41091 472 aaKnown RBP11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 NBL1P41271 181 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 FABP6P51161 128 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 TFF3Q07654 80 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 SLC38A11Q08AI6 406 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 GUSBP1Q15486 140 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 UTF1Q5T230 341 aa11.29□□□□□ -0.6
GTF2F1-201ENST00000394456 K7EM74 188 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 HIST1H2BKO60814 126 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 ZG16O60844 167 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 IFNA17P01571 189 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 HIST1H2BJP06899 126 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 HIST1H2BOP23527 126 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 HIST1H2BBP33778 126 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 HIST1H2BDP58876 126 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 HIST1H2BCP62807 126 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 ZNF146Q15072 292 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 HIST2H2BEQ16778 126 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 ACSF3Q4G176 576 aaPredicted RBP11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 KHDC3LQ587J8 217 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 HIST1H2BHQ93079 126 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 HIST1H2BNQ99877 126 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 HIST1H2BMQ99879 126 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 WIPI2Q9Y4P8 454 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 TRAV20A0A0B4J274 112 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 ODAMA1E959 279 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 MAP1LC3B2A6NCE7 125 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 LINC00473A8K010 186 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 ST8SIA5O15466 376 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 S100A8P05109 93 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 SLC25A6P12236 298 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 WDR25Q64LD2 544 aaPredicted RBP11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 OR13A1Q8NGR1 328 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 TAF15Q92804 592 aaKnown RBP eCLIP11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 ZNF251Q9BRH9 671 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 MAP1LC3BQ9GZQ8 125 aa11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 LIN7CQ9NUP9 197 aaKnown RBP11.28□□□□□ -0.6
GTF2F1-201ENST00000394456 HBE1P02100 147 aa11.27□□□□□ -0.61
GTF2F1-201ENST00000394456 GABRA2P47869 451 aa11.27□□□□□ -0.61
GTF2F1-201ENST00000394456 TNFRSF9Q07011 255 aa11.27□□□□□ -0.61
GTF2F1-201ENST00000394456 RTP5Q14D33 572 aa11.27□□□□□ -0.61
GTF2F1-201ENST00000394456 SPRNQ5BIV9 151 aa11.27□□□□□ -0.61
GTF2F1-201ENST00000394456 NECAP1Q8NC96 275 aa11.27□□□□□ -0.61
GTF2F1-201ENST00000394456 ABHD5Q8WTS1 349 aa11.27□□□□□ -0.61
GTF2F1-201ENST00000394456 OPN3Q9H1Y3 402 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms