RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 SRMP19623 302 aa13.46□□□□□ -0.25
SNRPA1-202ENST00000394082 PITPNAQ00169 270 aa13.46□□□□□ -0.25
SNRPA1-202ENST00000394082 FAM89BQ8N5H3 189 aa13.46□□□□□ -0.25
SNRPA1-202ENST00000394082 OR6M1Q8NGM8 313 aa13.46□□□□□ -0.25
SNRPA1-202ENST00000394082 ARPC1AQ92747 370 aa13.46□□□□□ -0.25
SNRPA1-202ENST00000394082 OR4C12Q96R67 309 aa13.46□□□□□ -0.25
SNRPA1-202ENST00000394082 TSNAXQ99598 290 aaKnown RBP13.46□□□□□ -0.25
SNRPA1-202ENST00000394082 HSF4Q9ULV5 492 aa13.46□□□□□ -0.25
SNRPA1-202ENST00000394082 H7C2Y5 167 aa13.45□□□□□ -0.26
SNRPA1-202ENST00000394082 BRI3O95415 125 aa13.45□□□□□ -0.26
SNRPA1-202ENST00000394082 GNAO1P09471 354 aa13.45□□□□□ -0.26
SNRPA1-202ENST00000394082 PSG5Q15238 335 aa13.45□□□□□ -0.26
SNRPA1-202ENST00000394082 MOGAT2Q3SYC2 334 aa13.45□□□□□ -0.26
SNRPA1-202ENST00000394082 UNQ5815/PRO19632Q6UWF5 114 aa13.45□□□□□ -0.26
SNRPA1-202ENST00000394082 ABHD14BQ96IU4 210 aa13.45□□□□□ -0.26
SNRPA1-202ENST00000394082 CITED4Q96RK1 184 aa13.45□□□□□ -0.26
SNRPA1-202ENST00000394082 TM2D3Q9BRN9 247 aa13.45□□□□□ -0.26
SNRPA1-202ENST00000394082 NICN1Q9BSH3 213 aa13.45□□□□□ -0.26
SNRPA1-202ENST00000394082 URM1Q9BTM9 101 aaKnown RBP13.45□□□□□ -0.26
SNRPA1-202ENST00000394082 ELOVL1Q9BW60 279 aa13.45□□□□□ -0.26
SNRPA1-202ENST00000394082 MND1Q9BWT6 205 aa13.45□□□□□ -0.26
SNRPA1-202ENST00000394082 C11orf54Q9H0W9 315 aaPredicted RBP13.45□□□□□ -0.26
SNRPA1-202ENST00000394082 CHMP1AQ9HD42 196 aaPredicted RBP13.45□□□□□ -0.26
SNRPA1-202ENST00000394082 SACSQ9NZJ4 4579 aa13.45□□□□□ -0.26
SNRPA1-202ENST00000394082 HSPA12AO43301 675 aa13.44□□□□□ -0.26
SNRPA1-202ENST00000394082 PROP1O75360 226 aa13.44□□□□□ -0.26
SNRPA1-202ENST00000394082 IGLV1-51P01701 117 aa13.44□□□□□ -0.26
SNRPA1-202ENST00000394082 CEACAM6P40199 344 aa13.44□□□□□ -0.26
SNRPA1-202ENST00000394082 TPPP2P59282 170 aa13.44□□□□□ -0.26
SNRPA1-202ENST00000394082 INSL4Q14641 139 aa13.44□□□□□ -0.26
SNRPA1-202ENST00000394082 HSD17B12Q53GQ0 312 aa13.44□□□□□ -0.26
SNRPA1-202ENST00000394082 RBM48Q5RL73 367 aaKnown RBP13.44□□□□□ -0.26
SNRPA1-202ENST00000394082 GLDNQ6ZMI3 551 aaPredicted RBP13.44□□□□□ -0.26
SNRPA1-202ENST00000394082 OVCH2Q7RTZ1 564 aa13.44□□□□□ -0.26
SNRPA1-202ENST00000394082 PDPNQ86YL7 162 aa13.44□□□□□ -0.26
SNRPA1-202ENST00000394082 LFNGQ8NES3 379 aa13.44□□□□□ -0.26
SNRPA1-202ENST00000394082 BPIFB6Q8NFQ5 453 aa13.44□□□□□ -0.26
SNRPA1-202ENST00000394082 ABHD5Q8WTS1 349 aa13.44□□□□□ -0.26
SNRPA1-202ENST00000394082 PARP12Q9H0J9 701 aaKnown RBP13.44□□□□□ -0.26
SNRPA1-202ENST00000394082 LPAR5Q9H1C0 372 aa13.44□□□□□ -0.26
SNRPA1-202ENST00000394082 RANGRFQ9HD47 186 aaPredicted RBP13.44□□□□□ -0.26
SNRPA1-202ENST00000394082 METTL1Q9UBP6 276 aaKnown RBP13.44□□□□□ -0.26
SNRPA1-202ENST00000394082 STUB1Q9UNE7 303 aa13.44□□□□□ -0.26
SNRPA1-202ENST00000394082 A3GALT2U3KPV4 340 aa13.44□□□□□ -0.26
SNRPA1-202ENST00000394082 RYR2Q92736 4967 aa13.44□□□□□ -0.26
SNRPA1-202ENST00000394082 TRIM64CA6NLI5 447 aa13.43□□□□□ -0.26
SNRPA1-202ENST00000394082 CASQ2O14958 399 aaPredicted RBP13.43□□□□□ -0.26
SNRPA1-202ENST00000394082 CDK1P06493 297 aa13.43□□□□□ -0.26
SNRPA1-202ENST00000394082 UCHL1P09936 223 aa13.43□□□□□ -0.26
SNRPA1-202ENST00000394082 LYL1P12980 280 aa13.43□□□□□ -0.26
SNRPA1-202ENST00000394082 ZP3P21754 424 aa13.43□□□□□ -0.26
SNRPA1-202ENST00000394082 RANBP1P43487 201 aa13.43□□□□□ -0.26
SNRPA1-202ENST00000394082 HLA-DRB3P79483 266 aa13.43□□□□□ -0.26
SNRPA1-202ENST00000394082 OGFRL1Q5TC84 451 aaPredicted RBP13.43□□□□□ -0.26
SNRPA1-202ENST00000394082 Q8N1Y9 231 aa13.43□□□□□ -0.26
SNRPA1-202ENST00000394082 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.43□□□□□ -0.26
SNRPA1-202ENST00000394082 CASTOR1Q8WTX7 329 aa13.43□□□□□ -0.26
SNRPA1-202ENST00000394082 TMEM68Q96MH6 324 aa13.43□□□□□ -0.26
SNRPA1-202ENST00000394082 C12orf4Q9NQ89 552 aa13.43□□□□□ -0.26
SNRPA1-202ENST00000394082 TENM2Q9NT68 2774 aa13.43□□□□□ -0.26
SNRPA1-202ENST00000394082 C19orf73Q9NVV2 129 aa13.43□□□□□ -0.26
SNRPA1-202ENST00000394082 GAB2Q9UQC2 676 aa13.43□□□□□ -0.26
SNRPA1-202ENST00000394082 A0A0A6YYD4 124 aa13.42□□□□□ -0.26
SNRPA1-202ENST00000394082 A0A0G2JLM5 398 aa13.42□□□□□ -0.26
SNRPA1-202ENST00000394082 FOXI3A8MTJ6 420 aaPredicted RBP13.42□□□□□ -0.26
SNRPA1-202ENST00000394082 LDLRAD4O15165 306 aa13.42□□□□□ -0.26
SNRPA1-202ENST00000394082 CA2P00918 260 aa13.42□□□□□ -0.26
SNRPA1-202ENST00000394082 IGKV1-16P04430 117 aa13.42□□□□□ -0.26
SNRPA1-202ENST00000394082 CPEP16870 476 aa13.42□□□□□ -0.26
SNRPA1-202ENST00000394082 SPHARQ15513 63 aa13.42□□□□□ -0.26
SNRPA1-202ENST00000394082 CEACAM19Q7Z692 300 aa13.42□□□□□ -0.26
SNRPA1-202ENST00000394082 SETD6Q8TBK2 473 aa13.42□□□□□ -0.26
SNRPA1-202ENST00000394082 FAM103A1Q9BTL3 118 aaKnown RBP13.42□□□□□ -0.26
SNRPA1-202ENST00000394082 TMED9Q9BVK6 235 aa13.42□□□□□ -0.26
SNRPA1-202ENST00000394082 Q9N2K0 584 aa13.42□□□□□ -0.26
SNRPA1-202ENST00000394082 OR1A1Q9P1Q5 309 aa13.42□□□□□ -0.26
SNRPA1-202ENST00000394082 AK3Q9UIJ7 227 aa13.42□□□□□ -0.26
SNRPA1-202ENST00000394082 ZNF221Q9UK13 617 aa13.42□□□□□ -0.26
SNRPA1-202ENST00000394082 LSM2Q9Y333 95 aaKnown RBP13.42□□□□□ -0.26
SNRPA1-202ENST00000394082 SLC17A2O00624 439 aa13.41□□□□□ -0.26
SNRPA1-202ENST00000394082 SOCS1O15524 211 aa13.41□□□□□ -0.26
SNRPA1-202ENST00000394082 IGHV3-11P01762 117 aa13.41□□□□□ -0.26
SNRPA1-202ENST00000394082 TRGV3P03979 118 aa13.41□□□□□ -0.26
SNRPA1-202ENST00000394082 ARSBP15848 533 aa13.41□□□□□ -0.26
SNRPA1-202ENST00000394082 LGALS7P47929 136 aa13.41□□□□□ -0.26
SNRPA1-202ENST00000394082 FXYD3Q14802 87 aa13.41□□□□□ -0.26
SNRPA1-202ENST00000394082 ZNF383Q8NA42 475 aa13.41□□□□□ -0.26
SNRPA1-202ENST00000394082 POC5Q8NA72 575 aa13.41□□□□□ -0.26
SNRPA1-202ENST00000394082 MS4A10Q96PG2 267 aa13.41□□□□□ -0.26
SNRPA1-202ENST00000394082 CSMD3Q7Z407 3707 aa13.41□□□□□ -0.26
SNRPA1-202ENST00000394082 LYSTQ99698 3801 aa13.41□□□□□ -0.26
SNRPA1-202ENST00000394082 DIRAS3O95661 229 aa13.4□□□□□ -0.26
SNRPA1-202ENST00000394082 APOA2P02652 100 aa13.4□□□□□ -0.26
SNRPA1-202ENST00000394082 SCTP09683 121 aa13.4□□□□□ -0.26
SNRPA1-202ENST00000394082 IGHV4-30-4P0DP06 118 aa13.4□□□□□ -0.26
SNRPA1-202ENST00000394082 SERPINB10P48595 397 aa13.4□□□□□ -0.26
SNRPA1-202ENST00000394082 TMEM50BP56557 158 aa13.4□□□□□ -0.26
SNRPA1-202ENST00000394082 RPS16P62249 146 aaKnown RBP13.4□□□□□ -0.26
SNRPA1-202ENST00000394082 TAGLNQ01995 201 aaKnown RBP13.4□□□□□ -0.26
SNRPA1-202ENST00000394082 KLF5Q13887 457 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms