RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 SPAG16Q8N0X2 631 aa16.17■□□□□ 0.18
RAB5C-202ENST00000393860 ZNF439Q8NDP4 499 aa16.17■□□□□ 0.18
RAB5C-202ENST00000393860 ZNF680Q8NEM1 530 aa16.17■□□□□ 0.18
RAB5C-202ENST00000393860 LINC00574Q9H8X3 128 aa16.17■□□□□ 0.18
RAB5C-202ENST00000393860 RPUSD1Q9UJJ7 312 aaKnown RBP16.17■□□□□ 0.18
RAB5C-202ENST00000393860 S1PR2O95136 353 aa16.17■□□□□ 0.18
RAB5C-202ENST00000393860 EXOSC2Q13868 293 aaKnown RBP16.17■□□□□ 0.18
RAB5C-202ENST00000393860 ZNF345Q14585 488 aa16.17■□□□□ 0.18
RAB5C-202ENST00000393860 MSMO1Q15800 293 aa16.17■□□□□ 0.18
RAB5C-202ENST00000393860 CXorf66Q5JRM2 361 aaPredicted RBP16.17■□□□□ 0.18
RAB5C-202ENST00000393860 NCR3LG1Q68D85 454 aa16.17■□□□□ 0.18
RAB5C-202ENST00000393860 SLC7A5P1Q8MH63 180 aa16.17■□□□□ 0.18
RAB5C-202ENST00000393860 LYG1Q8N1E2 194 aa16.17■□□□□ 0.18
RAB5C-202ENST00000393860 SPIN2AQ99865 258 aa16.17■□□□□ 0.18
RAB5C-202ENST00000393860 SPIN2BQ9BPZ2 258 aa16.17■□□□□ 0.18
RAB5C-202ENST00000393860 MAGT1Q9H0U3 335 aa16.17■□□□□ 0.18
RAB5C-202ENST00000393860 ZNF66Q6ZN08 573 aa16.16■□□□□ 0.18
RAB5C-202ENST00000393860 ZNF841Q6ZN19 808 aa16.16■□□□□ 0.18
RAB5C-202ENST00000393860 RBMXL1Q96E39 390 aaKnown RBP16.16■□□□□ 0.18
RAB5C-202ENST00000393860 SAA2-SAA4A0A096LPE2 208 aa16.15■□□□□ 0.18
RAB5C-202ENST00000393860 KANTRA0A1W2PQU2 76 aa16.15■□□□□ 0.18
RAB5C-202ENST00000393860 BCL2L11O43521 198 aa16.15■□□□□ 0.18
RAB5C-202ENST00000393860 SNAPC5O75971 98 aa16.15■□□□□ 0.18
RAB5C-202ENST00000393860 SPDEFO95238 335 aa16.15■□□□□ 0.18
RAB5C-202ENST00000393860 RLN2P04090 185 aa16.15■□□□□ 0.18
RAB5C-202ENST00000393860 SAA2P0DJI9 122 aaPredicted RBP16.15■□□□□ 0.18
RAB5C-202ENST00000393860 DUTP33316 252 aaKnown RBP16.15■□□□□ 0.18
RAB5C-202ENST00000393860 POLR2GP62487 172 aaKnown RBP eCLIP16.15■□□□□ 0.18
RAB5C-202ENST00000393860 Q6ZRM9 215 aa16.15■□□□□ 0.18
RAB5C-202ENST00000393860 ZNF767PQ75MW2 155 aa16.15■□□□□ 0.18
RAB5C-202ENST00000393860 PCNPQ8WW12 178 aaKnown RBP16.15■□□□□ 0.18
RAB5C-202ENST00000393860 HSD17B10Q99714 261 aaKnown RBP16.15■□□□□ 0.18
RAB5C-202ENST00000393860 FLNCQ14315 2725 aa16.15■□□□□ 0.18
RAB5C-202ENST00000393860 ZNF462Q96JM2 2506 aa16.15■□□□□ 0.18
RAB5C-202ENST00000393860 ST8SIA3O43173 380 aa16.15■□□□□ 0.18
RAB5C-202ENST00000393860 G6PCP35575 357 aa16.15■□□□□ 0.18
RAB5C-202ENST00000393860 NUP62P37198 522 aaPredicted RBP16.15■□□□□ 0.18
RAB5C-202ENST00000393860 HTR2BP41595 481 aa16.15■□□□□ 0.18
RAB5C-202ENST00000393860 NKX2-1P43699 371 aaPredicted RBP16.15■□□□□ 0.18
RAB5C-202ENST00000393860 RAB7AP51149 207 aa16.15■□□□□ 0.18
RAB5C-202ENST00000393860 ODF3L1Q8IXM7 274 aa16.15■□□□□ 0.18
RAB5C-202ENST00000393860 RAB1CQ92928 201 aa16.15■□□□□ 0.18
RAB5C-202ENST00000393860 TIMD4Q96H15 378 aa16.15■□□□□ 0.18
RAB5C-202ENST00000393860 CACNG5Q9UF02 275 aa16.15■□□□□ 0.18
RAB5C-202ENST00000393860 POMT1Q9Y6A1 747 aa16.15■□□□□ 0.18
RAB5C-202ENST00000393860 ATP6V1G1O75348 118 aa16.14■□□□□ 0.17
RAB5C-202ENST00000393860 KRASP01116 189 aa16.14■□□□□ 0.17
RAB5C-202ENST00000393860 HKR1P10072 659 aa16.14■□□□□ 0.17
RAB5C-202ENST00000393860 TMEM155Q4W5P6 130 aa16.14■□□□□ 0.17
RAB5C-202ENST00000393860 CLEC9AQ6UXN8 241 aa16.14■□□□□ 0.17
RAB5C-202ENST00000393860 HEPN1Q6WQI6 88 aa16.14■□□□□ 0.17
RAB5C-202ENST00000393860 ZC4H2Q9NQZ6 224 aa16.14■□□□□ 0.17
RAB5C-202ENST00000393860 LPAR3Q9UBY5 353 aa16.14■□□□□ 0.17
RAB5C-202ENST00000393860 CLEC18AA5D8T8 446 aa16.13■□□□□ 0.17
RAB5C-202ENST00000393860 SSSCA1O60232 199 aa16.13■□□□□ 0.17
RAB5C-202ENST00000393860 FCGR3BO75015 233 aa16.13■□□□□ 0.17
RAB5C-202ENST00000393860 DLX1P56177 255 aa16.13■□□□□ 0.17
RAB5C-202ENST00000393860 DLX6P56179 175 aa16.13■□□□□ 0.17
RAB5C-202ENST00000393860 PRB3Q04118 309 aaPredicted RBP16.13■□□□□ 0.17
RAB5C-202ENST00000393860 CLEC18CQ8NCF0 446 aa16.13■□□□□ 0.17
RAB5C-202ENST00000393860 DMBX1Q8NFW5 382 aa16.13■□□□□ 0.17
RAB5C-202ENST00000393860 OR8B3Q8NGG8 313 aa16.13■□□□□ 0.17
RAB5C-202ENST00000393860 OR8B2Q96RD0 313 aa16.13■□□□□ 0.17
RAB5C-202ENST00000393860 ZNF471Q9BX82 626 aaPredicted RBP16.13■□□□□ 0.17
RAB5C-202ENST00000393860 CHODLQ9H9P2 273 aa16.13■□□□□ 0.17
RAB5C-202ENST00000393860 USF3Q68DE3 2245 aa16.13■□□□□ 0.17
RAB5C-202ENST00000393860 ITGB1BP1O14713 200 aa16.13■□□□□ 0.17
RAB5C-202ENST00000393860 MRPS11P82912 194 aaKnown RBP16.13■□□□□ 0.17
RAB5C-202ENST00000393860 SRSF1Q07955 248 aaKnown RBP eCLIP16.13■□□□□ 0.17
RAB5C-202ENST00000393860 ALKAL2Q6UX46 152 aa16.13■□□□□ 0.17
RAB5C-202ENST00000393860 LSM10Q969L4 123 aaKnown RBP16.13■□□□□ 0.17
RAB5C-202ENST00000393860 AQP10Q96PS8 301 aa16.13■□□□□ 0.17
RAB5C-202ENST00000393860 ARPC5LQ9BPX5 153 aa16.13■□□□□ 0.17
RAB5C-202ENST00000393860 F5H0A9 414 aaPredicted RBP16.12■□□□□ 0.17
RAB5C-202ENST00000393860 FSTL3O95633 263 aa16.12■□□□□ 0.17
RAB5C-202ENST00000393860 RPL12P30050 165 aaKnown RBP16.12■□□□□ 0.17
RAB5C-202ENST00000393860 TMEM30BQ3MIR4 351 aa16.12■□□□□ 0.17
RAB5C-202ENST00000393860 ESCO2Q56NI9 601 aa16.12■□□□□ 0.17
RAB5C-202ENST00000393860 SLC25A48Q6ZT89 311 aaKnown RBP16.12■□□□□ 0.17
RAB5C-202ENST00000393860 OR8H3Q8N146 312 aa16.12■□□□□ 0.17
RAB5C-202ENST00000393860 NEIL1Q96FI4 390 aaPredicted RBP16.12■□□□□ 0.17
RAB5C-202ENST00000393860 ZNF251Q9BRH9 671 aa16.12■□□□□ 0.17
RAB5C-202ENST00000393860 USP9XQ93008 2570 aaPredicted RBP16.12■□□□□ 0.17
RAB5C-202ENST00000393860 E5RGE8 158 aa16.11■□□□□ 0.17
RAB5C-202ENST00000393860 RAB29O14966 203 aa16.11■□□□□ 0.17
RAB5C-202ENST00000393860 IFNA7P01567 189 aa16.11■□□□□ 0.17
RAB5C-202ENST00000393860 WDR25Q64LD2 544 aaPredicted RBP16.11■□□□□ 0.17
RAB5C-202ENST00000393860 SLC51BQ86UW2 128 aa16.11■□□□□ 0.17
RAB5C-202ENST00000393860 OR10A7Q8NGE5 316 aa16.11■□□□□ 0.17
RAB5C-202ENST00000393860 MIOXQ9UGB7 285 aa16.11■□□□□ 0.17
RAB5C-202ENST00000393860 NSG2Q9Y328 171 aa16.11■□□□□ 0.17
RAB5C-202ENST00000393860 COL12A1Q99715 3063 aa16.11■□□□□ 0.17
RAB5C-202ENST00000393860 TRBV23-1A0A0A0MS06 115 aa16.11■□□□□ 0.17
RAB5C-202ENST00000393860 A0A1B0GU03 582 aa16.11■□□□□ 0.17
RAB5C-202ENST00000393860 PITX3O75364 302 aa16.11■□□□□ 0.17
RAB5C-202ENST00000393860 F12P00748 615 aaPredicted RBP16.11■□□□□ 0.17
RAB5C-202ENST00000393860 FAM216AQ8WUB2 273 aa16.11■□□□□ 0.17
RAB5C-202ENST00000393860 BSCL2Q96G97 398 aaPredicted RBP16.11■□□□□ 0.17
RAB5C-202ENST00000393860 SMIM3Q9BZL3 60 aa16.11■□□□□ 0.17
RAB5C-202ENST00000393860 UBQLN2Q9UHD9 624 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms