RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 IGHV3-43DP0DP04 118 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 NPBWR1P48145 328 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 LOXL3P58215 753 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 UBE2KP61086 200 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 TNFRSF9Q07011 255 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 ZNF808Q8N4W9 903 aaPredicted RBP7.53□□□□□ -1.2
TDP1-202ENST00000393452 CISD2Q8N5K1 135 aaKnown RBP7.53□□□□□ -1.2
TDP1-202ENST00000393452 EDARADDQ8WWZ3 215 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 AIFM2Q9BRQ8 373 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 GCM1Q9NP62 436 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 KCNJ16Q9NPI9 418 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 PSENENQ9NZ42 101 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 JKAMPQ9P055 326 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 JPT1Q9UK76 154 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 PSG11Q9UQ72 335 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 LAMP3Q9UQV4 416 aa7.53□□□□□ -1.2
TDP1-202ENST00000393452 DYSFO75923 2080 aa7.52□□□□□ -1.2
TDP1-202ENST00000393452 IGHV3OR15-7A0A075B7D8 119 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 LINC00473A8K010 186 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 K7ENP7 123 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 ST8SIA5O15466 376 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 YPEL1O60688 119 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 PROP1O75360 226 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 TSPAN9O75954 239 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 S1PR2O95136 353 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 KRASP01116 189 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 IGHV1-46P01743 117 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 IAPPP10997 89 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 ATF4P18848 351 aaPredicted RBP7.52□□□□□ -1.21
TDP1-202ENST00000393452 G6PCP35575 357 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 SELENOVP59797 346 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 RUNX1Q01196 453 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 ARL16Q0P5N6 197 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 TMEM267Q0VDI3 215 aaPredicted RBP7.52□□□□□ -1.21
TDP1-202ENST00000393452 PEA15Q15121 130 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 TBR1Q16650 682 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 MORN2Q502X0 79 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 SPSB3Q6PJ21 355 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 DPPA3Q6W0C5 159 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 HAPLN4Q86UW8 402 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 ZNF525Q8N782 197 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 CLRN3Q8NCR9 226 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 ZNRF1Q8ND25 227 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 Q8TCH9 128 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 TCTEX1D2Q8WW35 142 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 YPEL2Q96QA6 119 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 ABHD14AQ9BUJ0 271 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 KPTNQ9Y664 436 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 BTBD17A6NE02 478 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 LRRC30A6NM36 301 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 DEFB108AA8MXU0 73 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 C16orf97H3BN30 126 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 PPIHO43447 177 aaKnown RBP7.52□□□□□ -1.21
TDP1-202ENST00000393452 CLDN14O95500 239 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 FOXC1Q12948 553 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 BTNL3Q6UXE8 466 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 TMEM108Q6UXF1 575 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 TMEM14EPQ6UXP3 125 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 C14orf79Q96F83 325 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 SDSLQ96GA7 329 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 PBDC1Q9BVG4 233 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 SCNM1Q9BWG6 230 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 PARD6GQ9BYG4 376 aaPredicted RBP7.52□□□□□ -1.21
TDP1-202ENST00000393452 SMDT1Q9H4I9 107 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.52□□□□□ -1.21
TDP1-202ENST00000393452 RNF7Q9UBF6 113 aa7.52□□□□□ -1.21
TDP1-202ENST00000393452 BSNQ9UPA5 3926 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 MED19A0JLT2 244 aaPredicted RBP7.51□□□□□ -1.21
TDP1-202ENST00000393452 MEX3AA1L020 520 aaKnown RBP7.51□□□□□ -1.21
TDP1-202ENST00000393452 RAB29O14966 203 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 IFNA5P01569 189 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 OR8U8P0C7N1 319 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 METTL15P1P0C7V9 234 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 PTAFRP25105 342 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 PPT1P50897 306 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 HBG1P69891 147 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 HBG2P69892 147 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 TNFAIP6P98066 277 aaPredicted RBP7.51□□□□□ -1.21
TDP1-202ENST00000393452 ZNF816Q0VGE8 651 aaPredicted RBP7.51□□□□□ -1.21
TDP1-202ENST00000393452 Q3ZCU0 254 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 OR2B11Q5JQS5 317 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 TMEM88Q6PEY1 159 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 ZNF561Q8N587 486 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 KDF1Q8NAX2 398 aaPredicted RBP7.51□□□□□ -1.21
TDP1-202ENST00000393452 CD300LFQ8TDQ1 290 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 OR6C3Q9NZP0 311 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 SPTBN4Q9H254 2564 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 ITGB1BP1O14713 200 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 DUTP33316 252 aaKnown RBP7.51□□□□□ -1.21
TDP1-202ENST00000393452 FAM201AQ5SY85 155 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 AKR1C8PQ5T2L2 129 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 STUMQ69YW2 141 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 FAM122CQ6P4D5 195 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 GFRALQ6UXV0 394 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 SSX8Q7RTT4 187 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 THNSL2Q86YJ6 484 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 CBLN2Q8IUK8 224 aa7.51□□□□□ -1.21
TDP1-202ENST00000393452 PSMG3Q9BT73 122 aaPredicted RBP7.51□□□□□ -1.21
TDP1-202ENST00000393452 EIF5A2Q9GZV4 153 aaKnown RBP7.51□□□□□ -1.21
TDP1-202ENST00000393452 RBKSQ9H477 322 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms