RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 LOXL3P58215 753 aa11.89□□□□□ -0.51
MKS1-203ENST00000393120 TNFAIP6P98066 277 aaPredicted RBP11.89□□□□□ -0.51
MKS1-203ENST00000393120 TMEM267Q0VDI3 215 aaPredicted RBP11.89□□□□□ -0.51
MKS1-203ENST00000393120 AKR1C8PQ5T2L2 129 aa11.89□□□□□ -0.51
MKS1-203ENST00000393120 TMEM14EPQ6UXP3 125 aa11.89□□□□□ -0.51
MKS1-203ENST00000393120 ZNF525Q8N782 197 aa11.89□□□□□ -0.51
MKS1-203ENST00000393120 PSMG3Q9BT73 122 aaPredicted RBP11.89□□□□□ -0.51
MKS1-203ENST00000393120 IGHV3OR15-7A0A075B7D8 119 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 IGHV3-43A0A0B4J1X8 118 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 TRAV1-1A0A0B4J248 108 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 ST8SIA5O15466 376 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 S1PR2O95136 353 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 F12P00748 615 aaPredicted RBP11.88□□□□□ -0.51
MKS1-203ENST00000393120 IGHV3-43DP0DP04 118 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 G6PCP35575 357 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 TLE4Q04727 773 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 FOXC1Q12948 553 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 SPSB3Q6PJ21 355 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 GFRALQ6UXV0 394 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 HAPLN4Q86UW8 402 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 ZNRF1Q8ND25 227 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 SCGB1C1Q8TD33 95 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 EIF5A2Q9GZV4 153 aaKnown RBP11.88□□□□□ -0.51
MKS1-203ENST00000393120 RBKSQ9H477 322 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 GNG12Q9UBI6 72 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 RFNGQ9Y644 331 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 LINC00473A8K010 186 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 METTL15P1P0C7V9 234 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 GPR12P47775 334 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 PPT1P50897 306 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 RUNX1Q01196 453 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 ARL16Q0P5N6 197 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 ZNF816Q0VGE8 651 aaPredicted RBP11.88□□□□□ -0.51
MKS1-203ENST00000393120 LRRC75BQ2VPJ9 315 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 STUMQ69YW2 141 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 BTNL3Q6UXE8 466 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 DIRC2Q96SL1 478 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 ABHD14AQ9BUJ0 271 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 FAM234AQ9H0X4 552 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 SLC35B3Q9H1N7 401 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 ESRP2Q9H6T0 727 aaKnown RBP11.88□□□□□ -0.51
MKS1-203ENST00000393120 KIAA1456Q9P272 454 aa11.88□□□□□ -0.51
MKS1-203ENST00000393120 HEATR1Q9H583 2144 aaKnown RBP11.87□□□□□ -0.51
MKS1-203ENST00000393120 DMXL1Q9Y485 3027 aa11.87□□□□□ -0.51
MKS1-203ENST00000393120 FAM90A9PA6NNJ1 464 aa11.87□□□□□ -0.51
MKS1-203ENST00000393120 DEFB108AA8MXU0 73 aa11.87□□□□□ -0.51
MKS1-203ENST00000393120 PROP1O75360 226 aa11.87□□□□□ -0.51
MKS1-203ENST00000393120 DUTP33316 252 aaKnown RBP11.87□□□□□ -0.51
MKS1-203ENST00000393120 Q3ZCU0 254 aa11.87□□□□□ -0.51
MKS1-203ENST00000393120 AARDQ4LEZ3 155 aa11.87□□□□□ -0.51
MKS1-203ENST00000393120 H2BFWTQ7Z2G1 175 aa11.87□□□□□ -0.51
MKS1-203ENST00000393120 THNSL2Q86YJ6 484 aa11.87□□□□□ -0.51
MKS1-203ENST00000393120 SCNM1Q9BWG6 230 aa11.87□□□□□ -0.51
MKS1-203ENST00000393120 GVINP1Q7Z2Y8 2422 aa11.87□□□□□ -0.51
MKS1-203ENST00000393120 KIAA2026Q5HYC2 2103 aa11.87□□□□□ -0.51
MKS1-203ENST00000393120 RBFOX2O43251 390 aaKnown RBP eCLIP11.86□□□□□ -0.51
MKS1-203ENST00000393120 HBE1P02100 147 aa11.86□□□□□ -0.51
MKS1-203ENST00000393120 CD55P08174 381 aa11.86□□□□□ -0.51
MKS1-203ENST00000393120 SERF2P84101 59 aa11.86□□□□□ -0.51
MKS1-203ENST00000393120 OR2B11Q5JQS5 317 aa11.86□□□□□ -0.51
MKS1-203ENST00000393120 SPANXN5Q5MJ07 72 aa11.86□□□□□ -0.51
MKS1-203ENST00000393120 CIB3Q96Q77 187 aaPredicted RBP11.86□□□□□ -0.51
MKS1-203ENST00000393120 LINC00574Q9H8X3 128 aa11.86□□□□□ -0.51
MKS1-203ENST00000393120 CALYQ9NYX4 217 aa11.86□□□□□ -0.51
MKS1-203ENST00000393120 NDRG3Q9UGV2 375 aa11.86□□□□□ -0.51
MKS1-203ENST00000393120 SVILO95425 2214 aa11.86□□□□□ -0.51
MKS1-203ENST00000393120 RBFOX3A6NFN3 312 aa11.86□□□□□ -0.51
MKS1-203ENST00000393120 DPRXA6NFQ7 191 aa11.86□□□□□ -0.51
MKS1-203ENST00000393120 LY86O95711 162 aa11.86□□□□□ -0.51
MKS1-203ENST00000393120 RAB7AP51149 207 aa11.86□□□□□ -0.51
MKS1-203ENST00000393120 EDDM3BP56851 147 aa11.86□□□□□ -0.51
MKS1-203ENST00000393120 ATP6V1FQ16864 119 aa11.86□□□□□ -0.51
MKS1-203ENST00000393120 TEX36Q5VZQ5 186 aa11.86□□□□□ -0.51
MKS1-203ENST00000393120 NCR3LG1Q68D85 454 aa11.86□□□□□ -0.51
MKS1-203ENST00000393120 SLC25A24Q6NUK1 477 aa11.86□□□□□ -0.51
MKS1-203ENST00000393120 TMEM88Q6PEY1 159 aa11.86□□□□□ -0.51
MKS1-203ENST00000393120 RBMXL1Q96E39 390 aaKnown RBP11.86□□□□□ -0.51
MKS1-203ENST00000393120 CHD3Q12873 2000 aaKnown RBP11.85□□□□□ -0.51
MKS1-203ENST00000393120 KBTBD11-OT1A0A1B0GTJ5 212 aa11.85□□□□□ -0.51
MKS1-203ENST00000393120 MED19A0JLT2 244 aaPredicted RBP11.85□□□□□ -0.51
MKS1-203ENST00000393120 HPRT1P00492 218 aa11.85□□□□□ -0.51
MKS1-203ENST00000393120 THBDP07204 575 aa11.85□□□□□ -0.51
MKS1-203ENST00000393120 RAB2AP61019 212 aa11.85□□□□□ -0.51
MKS1-203ENST00000393120 CCL20P78556 96 aa11.85□□□□□ -0.51
MKS1-203ENST00000393120 C17orf58Q2M2W7 97 aa11.85□□□□□ -0.51
MKS1-203ENST00000393120 TMEM30BQ3MIR4 351 aa11.85□□□□□ -0.51
MKS1-203ENST00000393120 CENPVQ7Z7K6 275 aaPredicted RBP11.85□□□□□ -0.51
MKS1-203ENST00000393120 CBLN2Q8IUK8 224 aa11.85□□□□□ -0.51
MKS1-203ENST00000393120 SNRNP40Q96DI7 357 aaKnown RBP11.85□□□□□ -0.51
MKS1-203ENST00000393120 WDR61Q9GZS3 305 aaKnown RBP11.85□□□□□ -0.51
MKS1-203ENST00000393120 IFI27L2Q9H2X8 130 aa11.85□□□□□ -0.51
MKS1-203ENST00000393120 CLN8Q9UBY8 286 aa11.85□□□□□ -0.51
MKS1-203ENST00000393120 FBXO7Q9Y3I1 522 aa11.85□□□□□ -0.51
MKS1-203ENST00000393120 ZFHX4Q86UP3 3567 aa11.85□□□□□ -0.51
MKS1-203ENST00000393120 MUC6Q6W4X9 2439 aa11.85□□□□□ -0.51
MKS1-203ENST00000393120 MARCH11A6NNE9 402 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 GPR37O15354 613 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 KIR2DS2P43631 304 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 ZNF134P52741 427 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 ADIPOQQ15848 244 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms