RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 PMCHL2Q9BQD1 86 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 PYGO2Q9BRQ0 406 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 TMEM204Q9BSN7 226 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 PBOV1Q9GZY1 135 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 EP300Q09472 2414 aaPredicted RBP6.58□□□□□ -1.36
VTI1A-201ENST00000393077 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 TRAV1-1A0A0B4J248 108 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 CENPVL1A0A0U1RR11 272 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 A0A1B0GWB2 263 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 SERINC4A6NH21 518 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 MPPED1O15442 326 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 OR5AL1P0C617 328 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 EMDP50402 254 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 PSG6Q00889 435 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 DEFB133Q30KQ1 61 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 METRNLQ641Q3 311 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 ASPHD2Q6ICH7 369 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 DGAT2L6Q6ZPD8 337 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 TEX29Q8N6K0 151 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 SAP30LQ9HAJ7 183 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 GPR27Q9NS67 375 aa6.58□□□□□ -1.36
VTI1A-201ENST00000393077 C19orf53Q9UNZ5 99 aaPredicted RBP6.58□□□□□ -1.36
VTI1A-201ENST00000393077 IGLV3-16A0A075B6K0 115 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 A0A0A6YYD5 115 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 KBTBD11-OT1A0A1B0GTJ5 212 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 A0A1W2PP11 408 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 PRSS37A4D1T9 235 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 DEGS1O15121 323 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 HLA-DRB1P01911 266 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 GCSHP23434 173 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 CLRN1P58418 232 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 RPL27P61353 136 aaKnown RBP6.57□□□□□ -1.36
VTI1A-201ENST00000393077 MRPS21P82921 87 aaKnown RBP6.57□□□□□ -1.36
VTI1A-201ENST00000393077 RHOGP84095 191 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 FOXL1Q12952 345 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 GAGE5Q13069 117 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 GAGE6Q13070 117 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 TMEM187Q14656 261 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.57□□□□□ -1.36
VTI1A-201ENST00000393077 KIF26BQ2KJY2 2108 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 LINC01590Q5TEZ4 76 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 PTCRAQ6ISU1 281 aaPredicted RBP6.57□□□□□ -1.36
VTI1A-201ENST00000393077 ABCA7Q8IZY2 2146 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 DGAT2Q96PD7 388 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 NRTNQ99748 197 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 RTN4RQ9BZR6 473 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 PDCD11Q14690 1871 aaKnown RBP6.57□□□□□ -1.36
VTI1A-201ENST00000393077 HELTA6NFD8 242 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 CTSBP07858 339 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 C1QTNF9P0C862 333 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 TCTAP57738 103 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 SPEM2Q0P670 501 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 DEFB125Q8N687 156 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 OR13H1Q8NG92 308 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 C6orf106Q9H6K1 298 aaPredicted RBP6.57□□□□□ -1.36
VTI1A-201ENST00000393077 TBC1D29Q9UFV1 150 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 SLC17A4Q9Y2C5 497 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 TRPM7Q96QT4 1865 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 TMEM150CB9EJG8 249 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 SYNGR2O43760 224 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 LIPFP07098 398 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 SMIM13P0DJ93 91 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 TMEM50BP56557 158 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 RPS15AP62244 130 aaKnown RBP6.57□□□□□ -1.36
VTI1A-201ENST00000393077 DPTQ07507 201 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 FUT7Q11130 342 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 CD226Q15762 336 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 CACNA1EQ15878 2313 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 ZNF793Q6ZN11 406 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 TMEM136Q6ZRR5 245 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 LINC00696Q6ZRV3 163 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 LINC01555Q8NAE3 123 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 ZNF479Q96JC4 524 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 RASL10BQ96S79 203 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 YAE1D1Q9NRH1 226 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 PRR32B1ATL7 298 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 TAX1BP3O14907 124 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 GPR6P46095 362 aaPredicted RBP6.57□□□□□ -1.36
VTI1A-201ENST00000393077 LGALS7P47929 136 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 UNC119Q13432 240 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 LPAL2Q16609 132 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 CEACAM16Q2WEN9 425 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 BVES-AS1Q5T3Y7 98 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 Q6ZS52 159 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 ATG4DQ86TL0 474 aaPredicted RBP6.57□□□□□ -1.36
VTI1A-201ENST00000393077 OR2M3Q8NG83 312 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 IL1F10Q8WWZ1 152 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 CLEC7AQ9BXN2 247 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 IL36BQ9NZH7 164 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 B4GALT7Q9UBV7 327 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 UFC1Q9Y3C8 167 aa6.57□□□□□ -1.36
VTI1A-201ENST00000393077 ANK1P16157 1881 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 CNOT1A5YKK6 2376 aaKnown RBP6.56□□□□□ -1.36
VTI1A-201ENST00000393077 TRAV8-6A0A0B4J262 113 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 C1QTNF9BB2RNN3 333 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 PROB1E7EW31 1015 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 CHEK1O14757 476 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 UTS2O95399 124 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 EFEMP2O95967 443 aa6.56□□□□□ -1.36
VTI1A-201ENST00000393077 ISG15P05161 165 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms