RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 C1orf174Q8IYL3 243 aa11.32□□□□□ -0.6
LCA5-202ENST00000392959 DLL3Q9NYJ7 618 aa11.32□□□□□ -0.6
LCA5-202ENST00000392959 C5orf52A6NGY3 159 aa11.32□□□□□ -0.6
LCA5-202ENST00000392959 F2RL2O00254 374 aa11.32□□□□□ -0.6
LCA5-202ENST00000392959 CDK2AP1O14519 115 aa11.32□□□□□ -0.6
LCA5-202ENST00000392959 SELENOTP62341 195 aa11.32□□□□□ -0.6
LCA5-202ENST00000392959 ZNF362Q5T0B9 420 aaPredicted RBP11.32□□□□□ -0.6
LCA5-202ENST00000392959 MRPL37Q9BZE1 423 aaKnown RBP11.32□□□□□ -0.6
LCA5-202ENST00000392959 RBKSQ9H477 322 aa11.32□□□□□ -0.6
LCA5-202ENST00000392959 SLC25A10Q9UBX3 287 aaPredicted RBP11.32□□□□□ -0.6
LCA5-202ENST00000392959 TRIOBPQ9H2D6 2365 aa11.32□□□□□ -0.6
LCA5-202ENST00000392959 MARF1Q9Y4F3 1742 aaKnown RBP11.31□□□□□ -0.6
LCA5-202ENST00000392959 IGHV3-21A0A0B4J1V1 117 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 MPTX1A8MV57 137 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 C16orf97H3BN30 126 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 KLF4O43474 513 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 ZNF207O43670 478 aaKnown RBP11.31□□□□□ -0.6
LCA5-202ENST00000392959 SNAI3Q3KNW1 292 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 C19orf48Q6RUI8 117 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 SELENOHQ8IZQ5 122 aaKnown RBP11.31□□□□□ -0.6
LCA5-202ENST00000392959 GBGT1Q8N5D6 347 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 PPIAL4EA0A075B759 164 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 PPIAL4DF5H284 164 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 LINC00869P0C866 280 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 PPIAL4FP0DN26 164 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 IBA57Q5T440 356 aaKnown RBP11.31□□□□□ -0.6
LCA5-202ENST00000392959 ABLIM2Q6H8Q1 611 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 RARRES2Q99969 163 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 PPIAL4AQ9Y536 164 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 POLR2AP24928 1970 aaKnown RBP11.31□□□□□ -0.6
LCA5-202ENST00000392959 CCL8P80075 99 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 RTP5Q14D33 572 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 WDR25Q64LD2 544 aaPredicted RBP11.31□□□□□ -0.6
LCA5-202ENST00000392959 FAM214BQ7L5A3 538 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 OR5R1Q8NH85 324 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 HIGD1AQ9Y241 93 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 TGIF2-C20orf24A0A0A6YYL0 155 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 CEACAM18A8MTB9 384 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 HLA-DQA1P01909 254 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 NAT2P11245 290 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 RPL27AP46776 148 aaKnown RBP11.31□□□□□ -0.6
LCA5-202ENST00000392959 MIC13Q5XKP0 118 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 ZNF645Q8N7E2 425 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 POC1AQ8NBT0 407 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 HIST1H2BAQ96A08 127 aa11.31□□□□□ -0.6
LCA5-202ENST00000392959 K7ERU9 68 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 ZNF708P17019 499 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 CDX1P47902 265 aaPredicted RBP11.3□□□□□ -0.6
LCA5-202ENST00000392959 PKIBQ9C010 78 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 FAM117AQ9C073 453 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 TDRD6O60522 2096 aaKnown RBP11.3□□□□□ -0.6
LCA5-202ENST00000392959 J3KRW8 73 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 ZNHIT1O43257 154 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 TCF21O43680 179 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 FHITP49789 147 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 EGR4Q05215 589 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 PRNTQ86SH4 94 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 MYOZ3Q8TDC0 251 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 SH3BGRL3Q9H299 93 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 IL36RNQ9UBH0 155 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 ABCA1O95477 2261 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 IGKV3-7A0A075B6H7 116 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 TMEM265A0A087WTH1 108 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.3□□□□□ -0.6
LCA5-202ENST00000392959 THY1P04216 161 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 CTSBP07858 339 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 DDTP30046 118 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 LRRC75BQ2VPJ9 315 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 ZNF826PQ6ZT77 177 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 WDR31Q8NA23 367 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 RBM14Q96PK6 669 aaKnown RBP11.3□□□□□ -0.6
LCA5-202ENST00000392959 AP5S1Q9NUS5 200 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.3□□□□□ -0.6
LCA5-202ENST00000392959 ZP1P60852 638 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 P2RY6Q15077 328 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 CCL13Q99616 98 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 CDC42EP3Q9UKI2 254 aa11.3□□□□□ -0.6
LCA5-202ENST00000392959 SCN2AQ99250 2005 aa11.29□□□□□ -0.6
LCA5-202ENST00000392959 LOC102724200A0A096LPH7 203 aaPredicted RBP11.29□□□□□ -0.6
LCA5-202ENST00000392959 IGHV1-45A0A0A0MS14 117 aa11.29□□□□□ -0.6
LCA5-202ENST00000392959 NPIPB13A6NJU9 1138 aa11.29□□□□□ -0.6
LCA5-202ENST00000392959 NPIPB4C9JG80 1138 aa11.29□□□□□ -0.6
LCA5-202ENST00000392959 ZNF735P0CB33 412 aa11.29□□□□□ -0.6
LCA5-202ENST00000392959 AGAP20933 346 aa11.29□□□□□ -0.6
LCA5-202ENST00000392959 UCP3P55916 312 aa11.29□□□□□ -0.6
LCA5-202ENST00000392959 IGLV3-21P80748 117 aaPredicted RBP11.29□□□□□ -0.6
LCA5-202ENST00000392959 SSX8Q7RTT4 187 aa11.29□□□□□ -0.6
LCA5-202ENST00000392959 ZNF738Q8NE65 137 aa11.29□□□□□ -0.6
LCA5-202ENST00000392959 OR4B1Q8NGF8 309 aa11.29□□□□□ -0.6
LCA5-202ENST00000392959 COL24A1Q17RW2 1714 aa11.29□□□□□ -0.6
LCA5-202ENST00000392959 TNFRSF9Q07011 255 aa11.29□□□□□ -0.6
LCA5-202ENST00000392959 TMEM187Q14656 261 aa11.29□□□□□ -0.6
LCA5-202ENST00000392959 GCSAMQ8N6F7 178 aa11.29□□□□□ -0.6
LCA5-202ENST00000392959 DPF1Q92782 380 aa11.29□□□□□ -0.6
LCA5-202ENST00000392959 ATG101Q9BSB4 218 aa11.29□□□□□ -0.6
LCA5-202ENST00000392959 SCNM1Q9BWG6 230 aa11.29□□□□□ -0.6
LCA5-202ENST00000392959 CISD1Q9NZ45 108 aaKnown RBP11.29□□□□□ -0.6
LCA5-202ENST00000392959 ZFP30Q9Y2G7 519 aa11.29□□□□□ -0.6
LCA5-202ENST00000392959 A0A0G2JK05 382 aa11.29□□□□□ -0.6
LCA5-202ENST00000392959 KLF7O75840 302 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms