RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 IGKV1-33P01594 117 aa14.99□□□□□ -0.01
SQSTM1-202ENST00000389805 FAM78BQ5VT40 261 aa14.99□□□□□ -0.01
SQSTM1-202ENST00000389805 KIR2DL5AQ8N109 375 aa14.99□□□□□ -0.01
SQSTM1-202ENST00000389805 C1QTNF5Q9BXJ0 243 aa14.99□□□□□ -0.01
SQSTM1-202ENST00000389805 OR51B6Q9H340 312 aa14.99□□□□□ -0.01
SQSTM1-202ENST00000389805 IL36RNQ9UBH0 155 aa14.99□□□□□ -0.01
SQSTM1-202ENST00000389805 R4GN57 208 aa14.99□□□□□ -0.01
SQSTM1-202ENST00000389805 IFNA1P01562 189 aa14.99□□□□□ -0.01
SQSTM1-202ENST00000389805 DEFA4P12838 97 aa14.99□□□□□ -0.01
SQSTM1-202ENST00000389805 EGR1P18146 543 aa14.99□□□□□ -0.01
SQSTM1-202ENST00000389805 GCH1P30793 250 aa14.99□□□□□ -0.01
SQSTM1-202ENST00000389805 IGFBP7Q16270 282 aa14.99□□□□□ -0.01
SQSTM1-202ENST00000389805 VASH2Q86V25 355 aa14.99□□□□□ -0.01
SQSTM1-202ENST00000389805 PARD6AQ9NPB6 346 aa14.99□□□□□ -0.01
SQSTM1-202ENST00000389805 GRIFINA4D1Z8 144 aa14.98□□□□□ -0.01
SQSTM1-202ENST00000389805 LILRA1O75019 489 aa14.98□□□□□ -0.01
SQSTM1-202ENST00000389805 UCP1P25874 307 aa14.98□□□□□ -0.01
SQSTM1-202ENST00000389805 OR5I1Q13606 314 aa14.98□□□□□ -0.01
SQSTM1-202ENST00000389805 ZNF573Q86YE8 665 aa14.98□□□□□ -0.01
SQSTM1-202ENST00000389805 NEK7Q8TDX7 302 aa14.98□□□□□ -0.01
SQSTM1-202ENST00000389805 EXTL1Q92935 676 aa14.98□□□□□ -0.01
SQSTM1-202ENST00000389805 LPAR2Q9HBW0 351 aa14.98□□□□□ -0.01
SQSTM1-202ENST00000389805 TTC28Q96AY4 2481 aa14.98□□□□□ -0.01
SQSTM1-202ENST00000389805 A0A0U1RQK1 487 aa14.98□□□□□ -0.01
SQSTM1-202ENST00000389805 UBE2L5PA0A1B0GUS4 154 aa14.98□□□□□ -0.01
SQSTM1-202ENST00000389805 ZNF320A2RRD8 509 aa14.98□□□□□ -0.01
SQSTM1-202ENST00000389805 GPM6AP51674 278 aa14.98□□□□□ -0.01
SQSTM1-202ENST00000389805 MRPS11P82912 194 aaKnown RBP14.98□□□□□ -0.01
SQSTM1-202ENST00000389805 PLGLB1Q02325 96 aa14.98□□□□□ -0.01
SQSTM1-202ENST00000389805 ACOT6Q3I5F7 207 aaPredicted RBP14.98□□□□□ -0.01
SQSTM1-202ENST00000389805 HAPLN4Q86UW8 402 aa14.98□□□□□ -0.01
SQSTM1-202ENST00000389805 RPP25LQ8N5L8 163 aaKnown RBP14.98□□□□□ -0.01
SQSTM1-202ENST00000389805 ZNF525Q8N782 197 aa14.98□□□□□ -0.01
SQSTM1-202ENST00000389805 HIPK2Q9H2X6 1198 aa14.98□□□□□ -0.01
SQSTM1-202ENST00000389805 PSENENQ9NZ42 101 aa14.98□□□□□ -0.01
SQSTM1-202ENST00000389805 DSPP15924 2871 aaKnown RBP14.98□□□□□ -0.01
SQSTM1-202ENST00000389805 EP300Q09472 2414 aaPredicted RBP14.98□□□□□ -0.01
SQSTM1-202ENST00000389805 TCF21O43680 179 aa14.97□□□□□ -0.01
SQSTM1-202ENST00000389805 GYPAP02724 150 aa14.97□□□□□ -0.01
SQSTM1-202ENST00000389805 OR10J1P30954 320 aa14.97□□□□□ -0.01
SQSTM1-202ENST00000389805 TNFSF10P50591 281 aa14.97□□□□□ -0.01
SQSTM1-202ENST00000389805 SPANXN5Q5MJ07 72 aa14.97□□□□□ -0.01
SQSTM1-202ENST00000389805 PPIAL4AQ9Y536 164 aa14.97□□□□□ -0.01
SQSTM1-202ENST00000389805 TRAPPC1Q9Y5R8 145 aa14.97□□□□□ -0.01
SQSTM1-202ENST00000389805 PSG2P11465 335 aa14.97□□□□□ -0.01
SQSTM1-202ENST00000389805 BCL3P20749 454 aa14.97□□□□□ -0.01
SQSTM1-202ENST00000389805 RBM11P57052 281 aaKnown RBP14.97□□□□□ -0.01
SQSTM1-202ENST00000389805 TMEM164Q5U3C3 297 aa14.97□□□□□ -0.01
SQSTM1-202ENST00000389805 TMEM211Q6ICI0 200 aa14.97□□□□□ -0.01
SQSTM1-202ENST00000389805 OR8G2PQ6IF36 304 aa14.97□□□□□ -0.01
SQSTM1-202ENST00000389805 TCF23Q7RTU1 214 aa14.97□□□□□ -0.01
SQSTM1-202ENST00000389805 NUFIP2Q7Z417 695 aaKnown RBP14.97□□□□□ -0.01
SQSTM1-202ENST00000389805 TMEM45BQ96B21 275 aa14.97□□□□□ -0.01
SQSTM1-202ENST00000389805 OR4C12Q96R67 309 aa14.97□□□□□ -0.01
SQSTM1-202ENST00000389805 CACNG5Q9UF02 275 aa14.97□□□□□ -0.01
SQSTM1-202ENST00000389805 IGKV3D-15A0A087WSY6 115 aa14.97□□□□□ -0.01
SQSTM1-202ENST00000389805 ZNF883P0CG24 379 aa14.97□□□□□ -0.01
SQSTM1-202ENST00000389805 GNG10P50151 68 aa14.97□□□□□ -0.01
SQSTM1-202ENST00000389805 RPS16P62249 146 aaKnown RBP14.97□□□□□ -0.01
SQSTM1-202ENST00000389805 C12orf49Q9H741 205 aa14.97□□□□□ -0.01
SQSTM1-202ENST00000389805 IL3RAP26951 378 aa14.96□□□□□ -0.01
SQSTM1-202ENST00000389805 TMEM41BQ5BJD5 291 aa14.96□□□□□ -0.01
SQSTM1-202ENST00000389805 COLCA1Q6ZS62 124 aa14.96□□□□□ -0.01
SQSTM1-202ENST00000389805 PRR18Q8N4B5 295 aa14.96□□□□□ -0.01
SQSTM1-202ENST00000389805 SPSB4Q96A44 273 aa14.96□□□□□ -0.01
SQSTM1-202ENST00000389805 PRDM14Q9GZV8 571 aa14.96□□□□□ -0.01
SQSTM1-202ENST00000389805 B4GALT7Q9UBV7 327 aa14.96□□□□□ -0.01
SQSTM1-202ENST00000389805 CACNA1HO95180 2353 aa14.96□□□□□ -0.02
SQSTM1-202ENST00000389805 C1QTNF9BB2RNN3 333 aa14.96□□□□□ -0.02
SQSTM1-202ENST00000389805 PGLYRP1O75594 196 aaPredicted RBP14.96□□□□□ -0.02
SQSTM1-202ENST00000389805 MT-CO3P00414 261 aa14.96□□□□□ -0.02
SQSTM1-202ENST00000389805 SERPINE2P07093 398 aa14.96□□□□□ -0.02
SQSTM1-202ENST00000389805 BRS3P32247 399 aa14.96□□□□□ -0.02
SQSTM1-202ENST00000389805 PRDX4Q13162 271 aa14.96□□□□□ -0.02
SQSTM1-202ENST00000389805 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.96□□□□□ -0.02
SQSTM1-202ENST00000389805 ZDHHC23Q8IYP9 409 aa14.96□□□□□ -0.02
SQSTM1-202ENST00000389805 OR10V1Q8NGI7 309 aa14.96□□□□□ -0.02
SQSTM1-202ENST00000389805 ABHD14BQ96IU4 210 aa14.96□□□□□ -0.02
SQSTM1-202ENST00000389805 REPIN1Q9BWE0 567 aaKnown RBP14.96□□□□□ -0.02
SQSTM1-202ENST00000389805 ZNF391Q9UJN7 358 aa14.96□□□□□ -0.02
SQSTM1-202ENST00000389805 CLEC18AA5D8T8 446 aa14.95□□□□□ -0.02
SQSTM1-202ENST00000389805 SYNGR4O95473 234 aa14.95□□□□□ -0.02
SQSTM1-202ENST00000389805 PSMB3P49720 205 aa14.95□□□□□ -0.02
SQSTM1-202ENST00000389805 PMP22Q01453 160 aa14.95□□□□□ -0.02
SQSTM1-202ENST00000389805 CLEC18CQ8NCF0 446 aa14.95□□□□□ -0.02
SQSTM1-202ENST00000389805 DEFB127Q9H1M4 99 aa14.95□□□□□ -0.02
SQSTM1-202ENST00000389805 RIMS4Q9H426 269 aaPredicted RBP14.95□□□□□ -0.02
SQSTM1-202ENST00000389805 LAMA5O15230 3695 aa14.95□□□□□ -0.02
SQSTM1-202ENST00000389805 M0R296 226 aa14.95□□□□□ -0.02
SQSTM1-202ENST00000389805 TNFSF15O95150 251 aa14.95□□□□□ -0.02
SQSTM1-202ENST00000389805 ZNF16P17020 682 aaPredicted RBP14.95□□□□□ -0.02
SQSTM1-202ENST00000389805 ZNF552Q9H707 407 aaPredicted RBP14.95□□□□□ -0.02
SQSTM1-202ENST00000389805 MANBALQ9NQG1 85 aa14.95□□□□□ -0.02
SQSTM1-202ENST00000389805 BOD1L1Q8NFC6 3051 aa14.95□□□□□ -0.02
SQSTM1-202ENST00000389805 SPTBN2O15020 2390 aa14.95□□□□□ -0.02
SQSTM1-202ENST00000389805 CISD2Q8N5K1 135 aaKnown RBP14.94□□□□□ -0.02
SQSTM1-202ENST00000389805 PLSCR2Q9NRY7 297 aa14.94□□□□□ -0.02
SQSTM1-202ENST00000389805 IGKV1-6A0A0C4DH72 117 aa14.94□□□□□ -0.02
SQSTM1-202ENST00000389805 PGPEP1LA6NFU8 196 aa14.94□□□□□ -0.02
SQSTM1-202ENST00000389805 SIAH2O43255 324 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms