RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 NUBP1P53384 320 aa12.22□□□□□ -0.45
RTF1-201ENST00000389629 TCTAP57738 103 aa12.22□□□□□ -0.45
RTF1-201ENST00000389629 QRFPP83859 136 aa12.22□□□□□ -0.45
RTF1-201ENST00000389629 APCSP02743 223 aa12.22□□□□□ -0.45
RTF1-201ENST00000389629 CEACAM1P13688 526 aa12.22□□□□□ -0.45
RTF1-201ENST00000389629 CD1BP29016 333 aa12.22□□□□□ -0.45
RTF1-201ENST00000389629 UCP3P55916 312 aa12.22□□□□□ -0.45
RTF1-201ENST00000389629 FXYD3Q14802 87 aa12.22□□□□□ -0.45
RTF1-201ENST00000389629 LYZL4Q96KX0 146 aa12.22□□□□□ -0.45
RTF1-201ENST00000389629 ATP23Q9Y6H3 246 aa12.22□□□□□ -0.45
RTF1-201ENST00000389629 CLPSP04118 112 aa12.22□□□□□ -0.45
RTF1-201ENST00000389629 OR2D3Q8NGH3 330 aa12.22□□□□□ -0.45
RTF1-201ENST00000389629 C2orf88Q9BSF0 95 aa12.22□□□□□ -0.45
RTF1-201ENST00000389629 MRPL37Q9BZE1 423 aaKnown RBP12.22□□□□□ -0.45
RTF1-201ENST00000389629 COMMD5Q9GZQ3 224 aa12.22□□□□□ -0.45
RTF1-201ENST00000389629 GSX1Q9H4S2 264 aaPredicted RBP12.22□□□□□ -0.45
RTF1-201ENST00000389629 OR1A1Q9P1Q5 309 aa12.22□□□□□ -0.45
RTF1-201ENST00000389629 TMEM250H0YL14 139 aa12.22□□□□□ -0.45
RTF1-201ENST00000389629 FAM162BQ5T6X4 162 aa12.22□□□□□ -0.45
RTF1-201ENST00000389629 BMPERQ8N8U9 685 aa12.22□□□□□ -0.45
RTF1-201ENST00000389629 VSIRQ9H7M9 311 aa12.22□□□□□ -0.45
RTF1-201ENST00000389629 LNP1A1A4G5 178 aa12.21□□□□□ -0.45
RTF1-201ENST00000389629 EPOPA6NHQ4 379 aa12.21□□□□□ -0.45
RTF1-201ENST00000389629 PROB1E7EW31 1015 aa12.21□□□□□ -0.45
RTF1-201ENST00000389629 SYNGR1O43759 233 aa12.21□□□□□ -0.45
RTF1-201ENST00000389629 WISP1O95388 367 aa12.21□□□□□ -0.45
RTF1-201ENST00000389629 MFAP2P55001 183 aa12.21□□□□□ -0.45
RTF1-201ENST00000389629 ALKBH6Q3KRA9 238 aa12.21□□□□□ -0.45
RTF1-201ENST00000389629 C6orf15Q6UXA7 325 aaPredicted RBP12.21□□□□□ -0.45
RTF1-201ENST00000389629 ZNF837Q96EG3 531 aaPredicted RBP12.21□□□□□ -0.45
RTF1-201ENST00000389629 FZR1Q9UM11 496 aa12.21□□□□□ -0.45
RTF1-201ENST00000389629 DENND4CQ5VZ89 1909 aa12.21□□□□□ -0.45
RTF1-201ENST00000389629 MZT1Q08AG7 82 aa12.21□□□□□ -0.45
RTF1-201ENST00000389629 TUSC5Q8IXB3 177 aa12.21□□□□□ -0.45
RTF1-201ENST00000389629 CLEC1BQ9P126 229 aa12.21□□□□□ -0.45
RTF1-201ENST00000389629 NOTCH4Q99466 2003 aa12.21□□□□□ -0.45
RTF1-201ENST00000389629 OR5B21A6NL26 309 aa12.21□□□□□ -0.45
RTF1-201ENST00000389629 GALR2O43603 387 aaPredicted RBP12.21□□□□□ -0.45
RTF1-201ENST00000389629 CXorf1O96002 111 aa12.21□□□□□ -0.45
RTF1-201ENST00000389629 FGF12P61328 243 aa12.21□□□□□ -0.45
RTF1-201ENST00000389629 SPEM1Q8N4L4 309 aa12.21□□□□□ -0.45
RTF1-201ENST00000389629 C18orf12Q96KH6 178 aa12.21□□□□□ -0.45
RTF1-201ENST00000389629 OR6C3Q9NZP0 311 aa12.21□□□□□ -0.45
RTF1-201ENST00000389629 ICE1Q9Y2F5 2266 aa12.21□□□□□ -0.46
RTF1-201ENST00000389629 C5orf63A6NC05 138 aa12.21□□□□□ -0.46
RTF1-201ENST00000389629 SLC17A3O00476 420 aa12.21□□□□□ -0.46
RTF1-201ENST00000389629 TIAF1O95411 115 aa12.21□□□□□ -0.46
RTF1-201ENST00000389629 CCL4P13236 92 aa12.21□□□□□ -0.46
RTF1-201ENST00000389629 TPRX1Q8N7U7 411 aa12.21□□□□□ -0.46
RTF1-201ENST00000389629 BLNKQ8WV28 456 aa12.21□□□□□ -0.46
RTF1-201ENST00000389629 IL36RNQ9UBH0 155 aa12.21□□□□□ -0.46
RTF1-201ENST00000389629 IGHV5-10-1A0A0J9YXX1 117 aa12.2□□□□□ -0.46
RTF1-201ENST00000389629 ZG16O60844 167 aa12.2□□□□□ -0.46
RTF1-201ENST00000389629 CT45A6P0DMU7 189 aa12.2□□□□□ -0.46
RTF1-201ENST00000389629 CT45A5P0DMU8 189 aa12.2□□□□□ -0.46
RTF1-201ENST00000389629 CT45A7P0DMV0 189 aa12.2□□□□□ -0.46
RTF1-201ENST00000389629 GZMBP10144 247 aa12.2□□□□□ -0.46
RTF1-201ENST00000389629 SRIP30626 198 aa12.2□□□□□ -0.46
RTF1-201ENST00000389629 CT45A1Q5HYN5 189 aa12.2□□□□□ -0.46
RTF1-201ENST00000389629 CT45A3Q8NHU0 189 aa12.2□□□□□ -0.46
RTF1-201ENST00000389629 KLRC4-KLRK1H3BQV0 150 aa12.2□□□□□ -0.46
RTF1-201ENST00000389629 LINC00271P0C7V0 271 aa12.2□□□□□ -0.46
RTF1-201ENST00000389629 NHLH1Q02575 133 aa12.2□□□□□ -0.46
RTF1-201ENST00000389629 MIC13Q5XKP0 118 aa12.2□□□□□ -0.46
RTF1-201ENST00000389629 SFRP2Q96HF1 295 aa12.2□□□□□ -0.46
RTF1-201ENST00000389629 PCED1AQ9H1Q7 454 aa12.2□□□□□ -0.46
RTF1-201ENST00000389629 UBE2L3P68036 154 aaKnown RBP12.2□□□□□ -0.46
RTF1-201ENST00000389629 OR51G1Q8NGK1 321 aa12.2□□□□□ -0.46
RTF1-201ENST00000389629 TMEM170AQ8WVE7 144 aa12.2□□□□□ -0.46
RTF1-201ENST00000389629 K7ERU9 68 aa12.2□□□□□ -0.46
RTF1-201ENST00000389629 SPINK14Q6IE38 97 aa12.2□□□□□ -0.46
RTF1-201ENST00000389629 Q8IYB0 196 aa12.2□□□□□ -0.46
RTF1-201ENST00000389629 QTRT1Q9BXR0 403 aaKnown RBP12.2□□□□□ -0.46
RTF1-201ENST00000389629 C1QTNF9BB2RNN3 333 aa12.19□□□□□ -0.46
RTF1-201ENST00000389629 TMEM11P17152 192 aa12.19□□□□□ -0.46
RTF1-201ENST00000389629 IL11RAQ14626 422 aa12.19□□□□□ -0.46
RTF1-201ENST00000389629 FA2HQ7L5A8 372 aa12.19□□□□□ -0.46
RTF1-201ENST00000389629 TGIF2LYQ8IUE0 185 aa12.19□□□□□ -0.46
RTF1-201ENST00000389629 WDFY1Q8IWB7 410 aa12.19□□□□□ -0.46
RTF1-201ENST00000389629 SLC25A45Q8N413 288 aa12.19□□□□□ -0.46
RTF1-201ENST00000389629 MPC1Q9Y5U8 109 aa12.19□□□□□ -0.46
RTF1-201ENST00000389629 FANCMQ8IYD8 2048 aa12.19□□□□□ -0.46
RTF1-201ENST00000389629 PGPEP1LA6NFU8 196 aa12.19□□□□□ -0.46
RTF1-201ENST00000389629 ZIC3O60481 467 aa12.19□□□□□ -0.46
RTF1-201ENST00000389629 CFPP27918 469 aa12.19□□□□□ -0.46
RTF1-201ENST00000389629 GABRA6Q16445 453 aa12.19□□□□□ -0.46
RTF1-201ENST00000389629 OR5A2Q8NGI9 324 aa12.19□□□□□ -0.46
RTF1-201ENST00000389629 MIEN1Q9BRT3 115 aa12.19□□□□□ -0.46
RTF1-201ENST00000389629 PXMP4Q9Y6I8 212 aa12.19□□□□□ -0.46
RTF1-201ENST00000389629 TRBV24-1A0A075B6N3 115 aa12.19□□□□□ -0.46
RTF1-201ENST00000389629 EPHA8P29322 1005 aaPredicted RBP12.19□□□□□ -0.46
RTF1-201ENST00000389629 CALHM1Q8IU99 346 aa12.19□□□□□ -0.46
RTF1-201ENST00000389629 WDYHV1Q96HA8 205 aa12.19□□□□□ -0.46
RTF1-201ENST00000389629 PSMG3Q9BT73 122 aaPredicted RBP12.19□□□□□ -0.46
RTF1-201ENST00000389629 CHRDL1Q9BU40 450 aa12.19□□□□□ -0.46
RTF1-201ENST00000389629 TMEM191AQ9H0A3 160 aa12.19□□□□□ -0.46
RTF1-201ENST00000389629 FRMPD3Q5JV73 1810 aa12.19□□□□□ -0.46
RTF1-201ENST00000389629 AESQ08117 197 aa12.19□□□□□ -0.46
RTF1-201ENST00000389629 C10orf128Q5T292 105 aa12.19□□□□□ -0.46
RTF1-201ENST00000389629 RNF166Q96A37 237 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms