RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 ACSM5Q6NUN0 579 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 ZFP62Q8NB50 900 aaPredicted RBP4.27□□□□□ -1.73
PTPRD-203ENST00000381196 OR2Y1Q8NGV0 311 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 OR51H1Q8NH63 302 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 POM121L2Q96KW2 1035 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 PLA2G3Q9NZ20 509 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 TBC1D29Q9UFV1 150 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 A0A1W2PNV4 684 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 TCRBV16S1A1N1A0A5B0 115 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 OR2W5A6NFC9 320 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 AKR7A3O95154 331 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 ETHE1O95571 254 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 LIM2P55344 173 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 ZNF816Q0VGE8 651 aaPredicted RBP4.27□□□□□ -1.73
PTPRD-203ENST00000381196 RTN4RL1Q86UN2 441 aaPredicted RBP4.27□□□□□ -1.73
PTPRD-203ENST00000381196 OR4S2Q8NH73 311 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 FAM103A1Q9BTL3 118 aaKnown RBP4.27□□□□□ -1.73
PTPRD-203ENST00000381196 MS4A7Q9GZW8 240 aaPredicted RBP4.27□□□□□ -1.73
PTPRD-203ENST00000381196 HEXA-AS1Q9H8Q6 139 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 TMEM106BQ9NUM4 274 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 B9D1Q9UPM9 204 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 TRAV27A0A087WT01 109 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 PRRT4C9JH25 899 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 CCL21O00585 134 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 SP1P08047 785 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 MARCH3Q86UD3 253 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 OR13C6PQ8NH95 151 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.27□□□□□ -1.73
PTPRD-203ENST00000381196 LRRC61Q9BV99 259 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 NRSN2Q9GZP1 204 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 MEX3AA1L020 520 aaKnown RBP4.26□□□□□ -1.73
PTPRD-203ENST00000381196 K7EMI3 77 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 OR2J2O76002 312 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 NXPH1P58417 271 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 SLC25A35Q3KQZ1 300 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 Q6ZNB5 142 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 OR52B4Q8NGK2 314 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 SGMS2Q8NHU3 365 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 TINAGL1Q9GZM7 467 aaPredicted RBP4.26□□□□□ -1.73
PTPRD-203ENST00000381196 DNAJB12Q9NXW2 375 aaKnown RBP4.26□□□□□ -1.73
PTPRD-203ENST00000381196 SYNGR2O43760 224 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 GRPP07492 148 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 SMIM13P0DJ93 91 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 COX5BP10606 129 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 ASIPP42127 132 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 DEFB108BQ8NET1 73 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 LYPD6BQ8NI32 183 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 TBX15Q96SF7 602 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 TM2D1Q9BX74 207 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 C11orf68Q9H3H3 251 aaKnown RBP4.26□□□□□ -1.73
PTPRD-203ENST00000381196 RBFOX2O43251 390 aaKnown RBP eCLIP4.26□□□□□ -1.73
PTPRD-203ENST00000381196 TMPRSS11DO60235 418 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 IGHV3-9P01782 118 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 TMIGD3P0DMS9 266 aaPredicted RBP4.26□□□□□ -1.73
PTPRD-203ENST00000381196 BCL3P20749 454 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 GFERP55789 205 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 TAL2Q16559 108 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 LRRC10Q5BKY1 277 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 COX20Q5RI15 118 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 PRAMEF5Q5TYX0 476 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 PRAMEF6Q5VXH4 476 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 LAMTOR3Q9UHA4 124 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 NPIPB11E5RHQ5 1161 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 ZNF205O95201 554 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 FAHP16930 419 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 PDLIM4P50479 330 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 ATP6V0E2Q8NHE4 81 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 WDYHV1Q96HA8 205 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 QTRT1Q9BXR0 403 aaKnown RBP4.26□□□□□ -1.73
PTPRD-203ENST00000381196 HIST1H2BKO60814 126 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 HIST1H2BJP06899 126 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 HIST1H2BOP23527 126 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 HIST1H2BBP33778 126 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 CLDN18P56856 261 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 HIST1H2BDP58876 126 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 HIST1H2BCP62807 126 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 HIST2H2BEQ16778 126 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.26□□□□□ -1.73
PTPRD-203ENST00000381196 SPATA31B1PQ5VZV4 182 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 MARCH1Q8TCQ1 289 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 OR5P3Q8WZ94 311 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 HIST1H2BHQ93079 126 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 GNRHR2Q96P88 292 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 HIST1H2BNQ99877 126 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 HIST1H2BMQ99879 126 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 ST3GAL6Q9Y274 331 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 A8MWP6 167 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 LMX1BO60663 402 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 KLF7O75840 302 aaPredicted RBP4.26□□□□□ -1.73
PTPRD-203ENST00000381196 Q0VG73 95 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 ADIPOQQ15848 244 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 TMEM251Q8N6I4 163 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 JKAMPQ9P055 326 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 ONECUT1Q9UBC0 465 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 COL4A6Q14031 1691 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 CXCL13O43927 109 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 ATP5LO75964 103 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 IGHV2-5P01817 119 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 LIPCP11150 499 aa4.26□□□□□ -1.73
PTPRD-203ENST00000381196 FGF5P12034 268 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms