RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 S100A7P31151 101 aa11.77□□□□□ -0.53
SDC1-202ENST00000381150 DUSP3P51452 185 aaPredicted RBP11.77□□□□□ -0.53
SDC1-202ENST00000381150 ARF1P84077 181 aaKnown RBP11.77□□□□□ -0.53
SDC1-202ENST00000381150 TRIM61Q5EBN2 209 aa11.77□□□□□ -0.53
SDC1-202ENST00000381150 SLC23A3Q6PIS1 610 aa11.77□□□□□ -0.53
SDC1-202ENST00000381150 ZNF808Q8N4W9 903 aaPredicted RBP11.77□□□□□ -0.53
SDC1-202ENST00000381150 OR1F12Q8NHA8 337 aa11.77□□□□□ -0.53
SDC1-202ENST00000381150 TAF15Q92804 592 aaKnown RBP eCLIP11.77□□□□□ -0.53
SDC1-202ENST00000381150 RAB40CQ96S21 281 aa11.77□□□□□ -0.53
SDC1-202ENST00000381150 CLN8Q9UBY8 286 aa11.77□□□□□ -0.53
SDC1-202ENST00000381150 RNF24Q9Y225 148 aa11.77□□□□□ -0.53
SDC1-202ENST00000381150 PMCHP20382 165 aa11.77□□□□□ -0.53
SDC1-202ENST00000381150 ZNF90Q03938 601 aa11.77□□□□□ -0.53
SDC1-202ENST00000381150 ZCCHC14Q8WYQ9 949 aaKnown RBP11.77□□□□□ -0.53
SDC1-202ENST00000381150 PSMF1Q92530 271 aa11.77□□□□□ -0.53
SDC1-202ENST00000381150 R3HDM4Q96D70 268 aa11.77□□□□□ -0.53
SDC1-202ENST00000381150 TMEM9BQ9NQ34 198 aa11.77□□□□□ -0.53
SDC1-202ENST00000381150 A0A0J9YW62 118 aa11.76□□□□□ -0.53
SDC1-202ENST00000381150 DUXBA0A1W2PPF3 345 aa11.76□□□□□ -0.53
SDC1-202ENST00000381150 CER1O95813 267 aa11.76□□□□□ -0.53
SDC1-202ENST00000381150 RAB7AP51149 207 aa11.76□□□□□ -0.53
SDC1-202ENST00000381150 ZNF816Q0VGE8 651 aaPredicted RBP11.76□□□□□ -0.53
SDC1-202ENST00000381150 KIAA1644Q3SXP7 199 aa11.76□□□□□ -0.53
SDC1-202ENST00000381150 TMEM211Q6ICI0 200 aa11.76□□□□□ -0.53
SDC1-202ENST00000381150 P2RX4Q99571 388 aa11.76□□□□□ -0.53
SDC1-202ENST00000381150 OR1A1Q9P1Q5 309 aa11.76□□□□□ -0.53
SDC1-202ENST00000381150 RNF115Q9Y4L5 304 aa11.76□□□□□ -0.53
SDC1-202ENST00000381150 LAMTOR5O43504 91 aa11.76□□□□□ -0.53
SDC1-202ENST00000381150 UCP1P25874 307 aa11.76□□□□□ -0.53
SDC1-202ENST00000381150 CHRNB4P30926 498 aa11.76□□□□□ -0.53
SDC1-202ENST00000381150 ADMP35318 185 aa11.76□□□□□ -0.53
SDC1-202ENST00000381150 B3GALT5-AS1P59052 145 aa11.76□□□□□ -0.53
SDC1-202ENST00000381150 Q0VFX4 171 aa11.76□□□□□ -0.53
SDC1-202ENST00000381150 TMEM183BQ1AE95 376 aa11.76□□□□□ -0.53
SDC1-202ENST00000381150 ACTL10Q5JWF8 245 aa11.76□□□□□ -0.53
SDC1-202ENST00000381150 ACSM6Q6P461 480 aa11.76□□□□□ -0.53
SDC1-202ENST00000381150 NAPSAO96009 420 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 KITLGP21583 273 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 OTX1P32242 354 aaPredicted RBP11.75□□□□□ -0.53
SDC1-202ENST00000381150 FUT6P51993 359 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 EDDM3BP56851 147 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 RAB35Q15286 201 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 GCSAMLQ5JQS6 135 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 Q6ZSR3 168 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 ZNF573Q86YE8 665 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 OR56B2PQ8NGI1 322 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 WDR61Q9GZS3 305 aaKnown RBP11.75□□□□□ -0.53
SDC1-202ENST00000381150 TRAV38-1A0A0B4J264 116 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 MDFIC2A0A1B0GVS7 189 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 C20orf202A1L168 122 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 BRS3P32247 399 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 NTF4P34130 210 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 CEACAM6P40199 344 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 C1orf210Q8IVY1 113 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 NEIL1Q96FI4 390 aaPredicted RBP11.75□□□□□ -0.53
SDC1-202ENST00000381150 C11orf1Q9H5F2 150 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 ROS1P08922 2347 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 TRAPPC2LH3BP13 241 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 SLC17A3O00476 420 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 CBR3O75828 277 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 VAMP5O95183 116 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 NTF3P20783 257 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 ATP5G3P48201 142 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 RAC1P63000 192 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 YRDCQ86U90 279 aaKnown RBP11.75□□□□□ -0.53
SDC1-202ENST00000381150 CISD2Q8N5K1 135 aaKnown RBP11.75□□□□□ -0.53
SDC1-202ENST00000381150 OR5D13Q8NGL4 314 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 SRXN1Q9BYN0 137 aa11.75□□□□□ -0.53
SDC1-202ENST00000381150 NCOR1O75376 2440 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 A0A0G2JMM0 328 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 A0A1W2PPB8 328 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 A0A1W2PRS3 328 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 KIR3DP1A8MWS1 328 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 SERF1AO75920 110 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 PAX1P15863 534 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 CRISP2P16562 243 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 TPPP2P59282 170 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 PPP1R32Q7Z5V6 425 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 HAPLN4Q86UW8 402 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 VASH2Q86V25 355 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 TGIF2LYQ8IUE0 185 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 FGFBP3Q8TAT2 258 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 PLPPR2Q96GM1 343 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 IGKV1-6A0A0C4DH72 117 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 TMEM210A6NLX4 147 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 F2Z2F3 143 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 M0QZK8 103 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 GGCTO75223 188 aaKnown RBP11.74□□□□□ -0.53
SDC1-202ENST00000381150 TFF3Q07654 80 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 CEACAM16Q2WEN9 425 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 Q6ZN92 141 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 PINX1Q96BK5 328 aaKnown RBP11.74□□□□□ -0.53
SDC1-202ENST00000381150 WNT10AQ9GZT5 417 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 TMEM106BQ9NUM4 274 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 PRR14LQ5THK1 2151 aa11.74□□□□□ -0.53
SDC1-202ENST00000381150 TRAV1-1A0A0B4J248 108 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 A0A1W2PPV4 95 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 CBY3A6NI87 242 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 FOLR3P41439 243 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 IER3P46695 156 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms