RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 MUC4Q99102 2169 aa12.97□□□□□ -0.33
HMGN1-203ENST00000380748 DNAH2Q9P225 4427 aa12.96□□□□□ -0.33
HMGN1-203ENST00000380748 SPDEFO95238 335 aa12.96□□□□□ -0.33
HMGN1-203ENST00000380748 PJVKQ0ZLH3 352 aa12.96□□□□□ -0.33
HMGN1-203ENST00000380748 RIPK1Q13546 671 aa12.96□□□□□ -0.33
HMGN1-203ENST00000380748 GPR176Q14439 515 aa12.96□□□□□ -0.33
HMGN1-203ENST00000380748 C6orf141Q5SZD1 244 aa12.96□□□□□ -0.33
HMGN1-203ENST00000380748 SIGIRRQ6IA17 410 aa12.96□□□□□ -0.33
HMGN1-203ENST00000380748 WFDC3Q8IUB2 231 aa12.96□□□□□ -0.33
HMGN1-203ENST00000380748 DRAXINQ8NBI3 349 aaPredicted RBP12.96□□□□□ -0.33
HMGN1-203ENST00000380748 GPR148Q8TDV2 347 aa12.96□□□□□ -0.33
HMGN1-203ENST00000380748 IL1F10Q8WWZ1 152 aa12.96□□□□□ -0.33
HMGN1-203ENST00000380748 USMG5Q96IX5 58 aa12.96□□□□□ -0.33
HMGN1-203ENST00000380748 TSNAXQ99598 290 aaKnown RBP12.96□□□□□ -0.33
HMGN1-203ENST00000380748 COA4Q9NYJ1 87 aa12.96□□□□□ -0.33
HMGN1-203ENST00000380748 AASSQ9UDR5 926 aa12.96□□□□□ -0.33
HMGN1-203ENST00000380748 STEAP1Q9UHE8 339 aa12.96□□□□□ -0.33
HMGN1-203ENST00000380748 POMPQ9Y244 141 aa12.96□□□□□ -0.33
HMGN1-203ENST00000380748 LOC102724200A0A096LPH7 203 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-203ENST00000380748 MSGN1A6NI15 193 aa12.95□□□□□ -0.34
HMGN1-203ENST00000380748 BAG2O95816 211 aa12.95□□□□□ -0.34
HMGN1-203ENST00000380748 CPEP16870 476 aa12.95□□□□□ -0.34
HMGN1-203ENST00000380748 FUT3P21217 361 aa12.95□□□□□ -0.34
HMGN1-203ENST00000380748 KIR2DS2P43631 304 aa12.95□□□□□ -0.34
HMGN1-203ENST00000380748 LGALS7P47929 136 aa12.95□□□□□ -0.34
HMGN1-203ENST00000380748 GBX2P52951 348 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-203ENST00000380748 LINC00205P59089 165 aa12.95□□□□□ -0.34
HMGN1-203ENST00000380748 RPS16P62249 146 aaKnown RBP12.95□□□□□ -0.34
HMGN1-203ENST00000380748 HMGN3Q15651 99 aa12.95□□□□□ -0.34
HMGN1-203ENST00000380748 GLIPR1L1Q6UWM5 242 aa12.95□□□□□ -0.34
HMGN1-203ENST00000380748 SLC16A13Q7RTY0 426 aa12.95□□□□□ -0.34
HMGN1-203ENST00000380748 AMIGO2Q86SJ2 522 aa12.95□□□□□ -0.34
HMGN1-203ENST00000380748 PHLDA1Q8WV24 401 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-203ENST00000380748 MUL1Q969V5 352 aa12.95□□□□□ -0.34
HMGN1-203ENST00000380748 SELENOIQ9C0D9 397 aa12.95□□□□□ -0.34
HMGN1-203ENST00000380748 ERVK13-1Q9NX77 482 aa12.95□□□□□ -0.34
HMGN1-203ENST00000380748 DYNC1H1Q14204 4646 aaKnown RBP12.94□□□□□ -0.34
HMGN1-203ENST00000380748 C2orf70A6NJV1 201 aa12.94□□□□□ -0.34
HMGN1-203ENST00000380748 FAM90A23PA8MXZ1 464 aa12.94□□□□□ -0.34
HMGN1-203ENST00000380748 APELAP0DMC3 54 aa12.94□□□□□ -0.34
HMGN1-203ENST00000380748 FOLR2P14207 255 aa12.94□□□□□ -0.34
HMGN1-203ENST00000380748 MRPL28Q13084 256 aaKnown RBP12.94□□□□□ -0.34
HMGN1-203ENST00000380748 SLC25A30Q5SVS4 291 aa12.94□□□□□ -0.34
HMGN1-203ENST00000380748 XAF1Q6GPH4 301 aa12.94□□□□□ -0.34
HMGN1-203ENST00000380748 TRUB1Q8WWH5 349 aaKnown RBP12.94□□□□□ -0.34
HMGN1-203ENST00000380748 GPX5O75715 221 aa12.93□□□□□ -0.34
HMGN1-203ENST00000380748 GLAP06280 429 aa12.93□□□□□ -0.34
HMGN1-203ENST00000380748 IGFBP3P17936 291 aaPredicted RBP12.93□□□□□ -0.34
HMGN1-203ENST00000380748 SNRPGP62308 76 aaKnown RBP12.93□□□□□ -0.34
HMGN1-203ENST00000380748 ZNF383Q8NA42 475 aa12.93□□□□□ -0.34
HMGN1-203ENST00000380748 Q96M66 194 aa12.93□□□□□ -0.34
HMGN1-203ENST00000380748 OR14A2Q96R54 314 aa12.93□□□□□ -0.34
HMGN1-203ENST00000380748 FAM90A7PA6NKC0 464 aa12.92□□□□□ -0.34
HMGN1-203ENST00000380748 SPRY2O43597 315 aa12.92□□□□□ -0.34
HMGN1-203ENST00000380748 PDCD6O75340 191 aa12.92□□□□□ -0.34
HMGN1-203ENST00000380748 PROP1O75360 226 aa12.92□□□□□ -0.34
HMGN1-203ENST00000380748 MGMTP16455 207 aa12.92□□□□□ -0.34
HMGN1-203ENST00000380748 ATF4P18848 351 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-203ENST00000380748 BMI1P35226 326 aa12.92□□□□□ -0.34
HMGN1-203ENST00000380748 GNGT1P63211 74 aa12.92□□□□□ -0.34
HMGN1-203ENST00000380748 EXOSC2Q13868 293 aaKnown RBP12.92□□□□□ -0.34
HMGN1-203ENST00000380748 DEFB135Q30KP9 77 aa12.92□□□□□ -0.34
HMGN1-203ENST00000380748 MEDAGQ5VYS4 303 aa12.92□□□□□ -0.34
HMGN1-203ENST00000380748 TMEM61Q8N0U2 210 aa12.92□□□□□ -0.34
HMGN1-203ENST00000380748 OR13C5Q8NGS8 318 aa12.92□□□□□ -0.34
HMGN1-203ENST00000380748 CACNG8Q8WXS5 425 aa12.92□□□□□ -0.34
HMGN1-203ENST00000380748 TMEM68Q96MH6 324 aa12.92□□□□□ -0.34
HMGN1-203ENST00000380748 MYCBPQ99417 103 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-203ENST00000380748 AGMATQ9BSE5 352 aa12.92□□□□□ -0.34
HMGN1-203ENST00000380748 TECRQ9NZ01 308 aaKnown RBP12.92□□□□□ -0.34
HMGN1-203ENST00000380748 ABRACLQ9P1F3 81 aa12.92□□□□□ -0.34
HMGN1-203ENST00000380748 ZNF230Q9UIE0 474 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-203ENST00000380748 TP53TG1Q9Y2A0 90 aa12.92□□□□□ -0.34
HMGN1-203ENST00000380748 LRRC42Q9Y546 428 aa12.92□□□□□ -0.34
HMGN1-203ENST00000380748 DNAH17Q9UFH2 4485 aa12.92□□□□□ -0.34
HMGN1-203ENST00000380748 MED14OSP0DP75 135 aa12.91□□□□□ -0.34
HMGN1-203ENST00000380748 GYS2P54840 703 aa12.91□□□□□ -0.34
HMGN1-203ENST00000380748 AWAT2Q6E213 333 aa12.91□□□□□ -0.34
HMGN1-203ENST00000380748 JAGN1Q8N5M9 183 aa12.91□□□□□ -0.34
HMGN1-203ENST00000380748 ADAD2Q8NCV1 583 aaKnown RBP12.91□□□□□ -0.34
HMGN1-203ENST00000380748 OR52B4Q8NGK2 314 aa12.91□□□□□ -0.34
HMGN1-203ENST00000380748 KCNG3Q8TAE7 436 aa12.91□□□□□ -0.34
HMGN1-203ENST00000380748 AKIP1Q9NQ31 210 aa12.91□□□□□ -0.34
HMGN1-203ENST00000380748 DNAH11Q96DT5 4516 aa12.91□□□□□ -0.34
HMGN1-203ENST00000380748 TRAV8-7A0A075B6U6 113 aa12.9□□□□□ -0.34
HMGN1-203ENST00000380748 CRTAPO75718 401 aaPredicted RBP12.9□□□□□ -0.34
HMGN1-203ENST00000380748 IGLV2-23P01705 113 aa12.9□□□□□ -0.34
HMGN1-203ENST00000380748 PRH1P02810 166 aa12.9□□□□□ -0.34
HMGN1-203ENST00000380748 CRYGBP07316 175 aa12.9□□□□□ -0.34
HMGN1-203ENST00000380748 FASP25445 335 aa12.9□□□□□ -0.34
HMGN1-203ENST00000380748 RHOGP84095 191 aa12.9□□□□□ -0.34
HMGN1-203ENST00000380748 LCE2DQ5TA82 110 aaPredicted RBP12.9□□□□□ -0.34
HMGN1-203ENST00000380748 PDPNQ86YL7 162 aa12.9□□□□□ -0.34
HMGN1-203ENST00000380748 SULT4A1Q9BR01 284 aa12.9□□□□□ -0.34
HMGN1-203ENST00000380748 OAZ3Q9UMX2 235 aa12.9□□□□□ -0.34
HMGN1-203ENST00000380748 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.89□□□□□ -0.35
HMGN1-203ENST00000380748 PPP5D1E7EU14 171 aa12.89□□□□□ -0.35
HMGN1-203ENST00000380748 HLA-AP01891 365 aaKnown RBP12.89□□□□□ -0.35
HMGN1-203ENST00000380748 Q6ZWC4 215 aa12.89□□□□□ -0.35
HMGN1-203ENST00000380748 FAM46BQ96A09 425 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms