RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 HBG2P69892 147 aa19.23■□□□□ 0.67
VPS16-201ENST00000380443 MORN2Q502X0 79 aa19.23■□□□□ 0.67
VPS16-201ENST00000380443 STUMQ69YW2 141 aa19.23■□□□□ 0.67
VPS16-201ENST00000380443 WFDC8Q8IUA0 241 aa19.23■□□□□ 0.67
VPS16-201ENST00000380443 ZNF808Q8N4W9 903 aaPredicted RBP19.23■□□□□ 0.67
VPS16-201ENST00000380443 RFESDQ8TAC1 157 aa19.23■□□□□ 0.67
VPS16-201ENST00000380443 RND1Q92730 232 aa19.23■□□□□ 0.67
VPS16-201ENST00000380443 C5orf30Q96GV9 206 aa19.23■□□□□ 0.67
VPS16-201ENST00000380443 VKORC1Q9BQB6 163 aa19.23■□□□□ 0.67
VPS16-201ENST00000380443 GNG12Q9UBI6 72 aa19.23■□□□□ 0.67
VPS16-201ENST00000380443 IGHV3OR15-7A0A075B7D8 119 aa19.22■□□□□ 0.67
VPS16-201ENST00000380443 DPRXA6NFQ7 191 aa19.22■□□□□ 0.67
VPS16-201ENST00000380443 CGB3P0DN86 165 aa19.22■□□□□ 0.67
VPS16-201ENST00000380443 CGB7P0DN87 165 aa19.22■□□□□ 0.67
VPS16-201ENST00000380443 SNCAP37840 140 aa19.22■□□□□ 0.67
VPS16-201ENST00000380443 GPR12P47775 334 aa19.22■□□□□ 0.67
VPS16-201ENST00000380443 TAGLNQ01995 201 aaKnown RBP19.22■□□□□ 0.67
VPS16-201ENST00000380443 PEA15Q15121 130 aa19.22■□□□□ 0.67
VPS16-201ENST00000380443 SPRNQ5BIV9 151 aa19.22■□□□□ 0.67
VPS16-201ENST00000380443 TEX36Q5VZQ5 186 aa19.22■□□□□ 0.67
VPS16-201ENST00000380443 ZNF295-AS1Q8N0V1 137 aa19.22■□□□□ 0.67
VPS16-201ENST00000380443 MS4A7Q9GZW8 240 aaPredicted RBP19.22■□□□□ 0.67
VPS16-201ENST00000380443 SH3BGRL3Q9H299 93 aa19.22■□□□□ 0.67
VPS16-201ENST00000380443 HSPB7Q9UBY9 170 aa19.22■□□□□ 0.67
VPS16-201ENST00000380443 PSG11Q9UQ72 335 aa19.22■□□□□ 0.67
VPS16-201ENST00000380443 IGSF10Q6WRI0 2623 aa19.21■□□□□ 0.67
VPS16-201ENST00000380443 A0A1B0GW64 132 aa19.21■□□□□ 0.67
VPS16-201ENST00000380443 BTBD17A6NE02 478 aa19.21■□□□□ 0.67
VPS16-201ENST00000380443 LY86O95711 162 aa19.21■□□□□ 0.67
VPS16-201ENST00000380443 RAB7AP51149 207 aa19.21■□□□□ 0.67
VPS16-201ENST00000380443 SRSF3P84103 164 aaKnown RBP19.21■□□□□ 0.67
VPS16-201ENST00000380443 BBC3Q96PG8 261 aaPredicted RBP19.21■□□□□ 0.67
VPS16-201ENST00000380443 PARD6GQ9BYG4 376 aaPredicted RBP19.21■□□□□ 0.67
VPS16-201ENST00000380443 HIPK2Q9H2X6 1198 aa19.21■□□□□ 0.67
VPS16-201ENST00000380443 SMDT1Q9H4I9 107 aa19.21■□□□□ 0.67
VPS16-201ENST00000380443 ZNF665Q9H7R5 613 aa19.21■□□□□ 0.67
VPS16-201ENST00000380443 FAM90A9PA6NNJ1 464 aa19.21■□□□□ 0.67
VPS16-201ENST00000380443 NXPH3O95157 252 aa19.21■□□□□ 0.67
VPS16-201ENST00000380443 SNAPINO95295 136 aa19.21■□□□□ 0.67
VPS16-201ENST00000380443 OR8U8P0C7N1 319 aa19.21■□□□□ 0.67
VPS16-201ENST00000380443 CD80P33681 288 aa19.21■□□□□ 0.67
VPS16-201ENST00000380443 UBE2KP61086 200 aa19.21■□□□□ 0.67
VPS16-201ENST00000380443 AKR1C1Q04828 323 aa19.21■□□□□ 0.67
VPS16-201ENST00000380443 TNFRSF9Q07011 255 aa19.21■□□□□ 0.67
VPS16-201ENST00000380443 ZNF616Q08AN1 781 aa19.21■□□□□ 0.67
VPS16-201ENST00000380443 PBDC1Q9BVG4 233 aa19.21■□□□□ 0.67
VPS16-201ENST00000380443 CALYQ9NYX4 217 aa19.21■□□□□ 0.67
VPS16-201ENST00000380443 PRRC2CQ9Y520 2896 aaKnown RBP19.2■□□□□ 0.66
VPS16-201ENST00000380443 LRRC30A6NM36 301 aa19.2■□□□□ 0.66
VPS16-201ENST00000380443 RBFOX2O43251 390 aaKnown RBP eCLIP19.2■□□□□ 0.66
VPS16-201ENST00000380443 RAMP3O60896 148 aa19.2■□□□□ 0.66
VPS16-201ENST00000380443 THBDP07204 575 aa19.2■□□□□ 0.66
VPS16-201ENST00000380443 KIR2DS2P43631 304 aa19.2■□□□□ 0.66
VPS16-201ENST00000380443 ASCL1P50553 236 aa19.2■□□□□ 0.66
VPS16-201ENST00000380443 TMEM182Q6ZP80 229 aaPredicted RBP19.2■□□□□ 0.66
VPS16-201ENST00000380443 TMEM217Q8N7C4 229 aa19.2■□□□□ 0.66
VPS16-201ENST00000380443 ZNRF1Q8ND25 227 aa19.2■□□□□ 0.66
VPS16-201ENST00000380443 DCTN5Q9BTE1 182 aa19.2■□□□□ 0.66
VPS16-201ENST00000380443 IGHV3-43A0A0B4J1X8 118 aa19.19■□□□□ 0.66
VPS16-201ENST00000380443 C17orf98A8MV24 154 aa19.19■□□□□ 0.66
VPS16-201ENST00000380443 ST8SIA5O15466 376 aa19.19■□□□□ 0.66
VPS16-201ENST00000380443 SCAF4O95104 1147 aaKnown RBP19.19■□□□□ 0.66
VPS16-201ENST00000380443 IGHV3-43DP0DP04 118 aa19.19■□□□□ 0.66
VPS16-201ENST00000380443 ADCYAP1P18509 176 aa19.19■□□□□ 0.66
VPS16-201ENST00000380443 EDDM3BP56851 147 aa19.19■□□□□ 0.66
VPS16-201ENST00000380443 LOXL3P58215 753 aa19.19■□□□□ 0.66
VPS16-201ENST00000380443 ZNF273Q14593 569 aa19.19■□□□□ 0.66
VPS16-201ENST00000380443 IZUMO4Q1ZYL8 232 aa19.19■□□□□ 0.66
VPS16-201ENST00000380443 Q3ZCU0 254 aa19.19■□□□□ 0.66
VPS16-201ENST00000380443 CIB3Q96Q77 187 aaPredicted RBP19.19■□□□□ 0.66
VPS16-201ENST00000380443 PIEZO2Q9H5I5 2752 aa19.19■□□□□ 0.66
VPS16-201ENST00000380443 BOD1L1Q8NFC6 3051 aa19.19■□□□□ 0.66
VPS16-201ENST00000380443 FAM208BQ5VWN6 2430 aa19.19■□□□□ 0.66
VPS16-201ENST00000380443 TRGV10A0A0A0MS01 117 aa19.18■□□□□ 0.66
VPS16-201ENST00000380443 C17orf100A8MU93 164 aa19.18■□□□□ 0.66
VPS16-201ENST00000380443 OR4A8P0C604 315 aa19.18■□□□□ 0.66
VPS16-201ENST00000380443 BSPH1Q075Z2 132 aa19.18■□□□□ 0.66
VPS16-201ENST00000380443 ADIPOQQ15848 244 aa19.18■□□□□ 0.66
VPS16-201ENST00000380443 ATRAIDQ6UW56 229 aa19.18■□□□□ 0.66
VPS16-201ENST00000380443 ZNF788Q6ZQV5 615 aa19.18■□□□□ 0.66
VPS16-201ENST00000380443 H2BFWTQ7Z2G1 175 aa19.18■□□□□ 0.66
VPS16-201ENST00000380443 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.18■□□□□ 0.66
VPS16-201ENST00000380443 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.18■□□□□ 0.66
VPS16-201ENST00000380443 CORO2AQ92828 525 aa19.18■□□□□ 0.66
VPS16-201ENST00000380443 EGLN1Q9GZT9 426 aa19.18■□□□□ 0.66
VPS16-201ENST00000380443 KCNJ16Q9NPI9 418 aa19.18■□□□□ 0.66
VPS16-201ENST00000380443 RALYQ9UKM9 306 aaKnown RBP19.18■□□□□ 0.66
VPS16-201ENST00000380443 CHD6Q8TD26 2715 aa19.18■□□□□ 0.66
VPS16-201ENST00000380443 S1PR2O95136 353 aa19.18■□□□□ 0.66
VPS16-201ENST00000380443 KRASP01116 189 aa19.18■□□□□ 0.66
VPS16-201ENST00000380443 DUTP33316 252 aaKnown RBP19.18■□□□□ 0.66
VPS16-201ENST00000380443 CASP6P55212 293 aa19.18■□□□□ 0.66
VPS16-201ENST00000380443 BRWD1-AS2P59051 145 aa19.18■□□□□ 0.66
VPS16-201ENST00000380443 ZNF816Q0VGE8 651 aaPredicted RBP19.18■□□□□ 0.66
VPS16-201ENST00000380443 SCGB1C1Q8TD33 95 aa19.18■□□□□ 0.66
VPS16-201ENST00000380443 LINC00574Q9H8X3 128 aa19.18■□□□□ 0.66
VPS16-201ENST00000380443 FAM96BQ9Y3D0 163 aa19.18■□□□□ 0.66
VPS16-201ENST00000380443 KBTBD11-OT1A0A1B0GTJ5 212 aa19.17■□□□□ 0.66
VPS16-201ENST00000380443 HPRT1P00492 218 aa19.17■□□□□ 0.66
VPS16-201ENST00000380443 G6PCP35575 357 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms