RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 HHLA2Q9UM44 414 aa5.62□□□□□ -1.51
RIPK1-202ENST00000380409 A0A1W2PNR3 127 aa5.62□□□□□ -1.51
RIPK1-202ENST00000380409 TMPRSS2O15393 492 aa5.62□□□□□ -1.51
RIPK1-202ENST00000380409 CD5LO43866 347 aa5.62□□□□□ -1.51
RIPK1-202ENST00000380409 ZNF253O75346 499 aa5.62□□□□□ -1.51
RIPK1-202ENST00000380409 CT62P0C5K7 136 aa5.62□□□□□ -1.51
RIPK1-202ENST00000380409 ECI1P42126 302 aa5.62□□□□□ -1.51
RIPK1-202ENST00000380409 TRIP6Q15654 476 aaKnown RBP5.62□□□□□ -1.51
RIPK1-202ENST00000380409 TMEM41BQ5BJD5 291 aa5.62□□□□□ -1.51
RIPK1-202ENST00000380409 FAM57BQ71RH2 274 aa5.62□□□□□ -1.51
RIPK1-202ENST00000380409 ZNF295-AS1Q8N0V1 137 aa5.62□□□□□ -1.51
RIPK1-202ENST00000380409 TCTEX1D1Q8N7M0 179 aa5.62□□□□□ -1.51
RIPK1-202ENST00000380409 OR2M3Q8NG83 312 aa5.62□□□□□ -1.51
RIPK1-202ENST00000380409 OR5P3Q8WZ94 311 aa5.62□□□□□ -1.51
RIPK1-202ENST00000380409 DPF1Q92782 380 aa5.62□□□□□ -1.51
RIPK1-202ENST00000380409 BTF3L4Q96K17 158 aa5.62□□□□□ -1.51
RIPK1-202ENST00000380409 OR5B12Q96R08 314 aa5.62□□□□□ -1.51
RIPK1-202ENST00000380409 VCX2Q9H322 139 aa5.62□□□□□ -1.51
RIPK1-202ENST00000380409 WDR76Q9H967 626 aa5.62□□□□□ -1.51
RIPK1-202ENST00000380409 FAM60AQ9NP50 221 aa5.62□□□□□ -1.51
RIPK1-202ENST00000380409 DOPEY2Q9Y3R5 2298 aa5.62□□□□□ -1.51
RIPK1-202ENST00000380409 JMJD7P0C870 316 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 TMEM50BP56557 158 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 PRSS12P56730 875 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 CLDN17P56750 224 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 PSG4Q00888 419 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 ADIRFQ15847 76 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 ATG4DQ86TL0 474 aaPredicted RBP5.61□□□□□ -1.51
RIPK1-202ENST00000380409 ZNF440Q8IYI8 595 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 SMRP1Q8NCR6 262 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 OR5H2Q8NGV7 314 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 SSC4DQ8WTU2 575 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 LINC00615Q96LM1 132 aaPredicted RBP5.61□□□□□ -1.51
RIPK1-202ENST00000380409 LRRC61Q9BV99 259 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 KLHL13Q9P2N7 655 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 GNG13Q9P2W3 67 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 ZNF835Q9Y2P0 537 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 PTRH2Q9Y3E5 179 aaKnown RBP5.61□□□□□ -1.51
RIPK1-202ENST00000380409 TMED7-TICAM2A0A0A6YYA0 188 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 DUXBA0A1W2PPF3 345 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 SIRPB1O00241 398 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 ZNF205O95201 554 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 C3orf79P0CE67 100 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 HIST1H1DP16402 221 aaKnown RBP5.61□□□□□ -1.51
RIPK1-202ENST00000380409 HERV-K104P61576 105 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 HERV-K104P63124 156 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 TMEM267Q0VDI3 215 aaPredicted RBP5.61□□□□□ -1.51
RIPK1-202ENST00000380409 RNPS1Q15287 305 aaKnown RBP5.61□□□□□ -1.51
RIPK1-202ENST00000380409 TBR1Q16650 682 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 SLC35E4Q6ICL7 350 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 ERASQ7Z444 233 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 VN1R4Q7Z5H5 301 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 WDR5BQ86VZ2 330 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 ABHD14BQ96IU4 210 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 JMJD8Q96S16 334 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 VN1R1Q9GZP7 353 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 LIME1Q9H400 295 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 HES4Q9HCC6 221 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 NRN1Q9NPD7 142 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 SLC7A10Q9NS82 523 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 MTCH1Q9NZJ7 389 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 TRAV9-1A0A075B6T8 112 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 SPAARA0A1B0GVQ0 90 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 MEGF11A6BM72 1044 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 TNFRSF6BO95407 300 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 RUNX1Q01196 453 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 HAPLN4Q86UW8 402 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 OTOSQ8NHW6 89 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 KCNS1Q96KK3 526 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 LMF2Q9BU23 707 aaKnown RBP5.61□□□□□ -1.51
RIPK1-202ENST00000380409 OTOGLQ3ZCN5 2332 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 ADAMTS9Q9P2N4 1935 aa5.61□□□□□ -1.51
RIPK1-202ENST00000380409 HLA-HP01893 362 aa5.6□□□□□ -1.51
RIPK1-202ENST00000380409 S100GP29377 79 aa5.6□□□□□ -1.51
RIPK1-202ENST00000380409 NKX2-1P43699 371 aaPredicted RBP5.6□□□□□ -1.51
RIPK1-202ENST00000380409 CYB561P49447 251 aa5.6□□□□□ -1.51
RIPK1-202ENST00000380409 CKS1BP61024 79 aa5.6□□□□□ -1.51
RIPK1-202ENST00000380409 RPL18Q07020 188 aaKnown RBP5.6□□□□□ -1.51
RIPK1-202ENST00000380409 ACKR1Q16570 336 aa5.6□□□□□ -1.51
RIPK1-202ENST00000380409 PRTGQ2VWP7 1150 aa5.6□□□□□ -1.51
RIPK1-202ENST00000380409 KIAA1644Q3SXP7 199 aa5.6□□□□□ -1.51
RIPK1-202ENST00000380409 INO80CQ6PI98 192 aaPredicted RBP5.6□□□□□ -1.51
RIPK1-202ENST00000380409 CRIP3Q6Q6R5 217 aa5.6□□□□□ -1.51
RIPK1-202ENST00000380409 TCF23Q7RTU1 214 aa5.6□□□□□ -1.51
RIPK1-202ENST00000380409 BCORP1Q8N888 145 aa5.6□□□□□ -1.51
RIPK1-202ENST00000380409 OR2Y1Q8NGV0 311 aa5.6□□□□□ -1.51
RIPK1-202ENST00000380409 DAZAP1Q96EP5 407 aaKnown RBP5.6□□□□□ -1.51
RIPK1-202ENST00000380409 SMIM7Q9BQ49 75 aa5.6□□□□□ -1.51
RIPK1-202ENST00000380409 SLC17A4Q9Y2C5 497 aa5.6□□□□□ -1.51
RIPK1-202ENST00000380409 CFAP47Q6ZTR5 3102 aa5.6□□□□□ -1.51
RIPK1-202ENST00000380409 LOC102725191A0A1B0GVB3 256 aa5.6□□□□□ -1.51
RIPK1-202ENST00000380409 FBLL1A6NHQ2 334 aaKnown RBP5.6□□□□□ -1.51
RIPK1-202ENST00000380409 TNFRSF10CO14798 259 aa5.6□□□□□ -1.51
RIPK1-202ENST00000380409 ZNF728P0DKX0 622 aa5.6□□□□□ -1.51
RIPK1-202ENST00000380409 IGLL1P15814 213 aa5.6□□□□□ -1.51
RIPK1-202ENST00000380409 SPINK2P20155 84 aa5.6□□□□□ -1.51
RIPK1-202ENST00000380409 NPBWR2P48146 333 aa5.6□□□□□ -1.51
RIPK1-202ENST00000380409 ZNF83P51522 516 aa5.6□□□□□ -1.51
RIPK1-202ENST00000380409 ZNF133P52736 654 aaPredicted RBP5.6□□□□□ -1.51
RIPK1-202ENST00000380409 HLA-DRB5Q30154 266 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms