RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 FABP9Q0Z7S8 132 aa16.22■□□□□ 0.19
SSU72-204ENST00000378726 TBC1D26Q86UD7 250 aa16.22■□□□□ 0.19
SSU72-204ENST00000378726 SLC35G3Q8N808 338 aa16.22■□□□□ 0.19
SSU72-204ENST00000378726 LINC01560Q8TB33 94 aa16.22■□□□□ 0.19
SSU72-204ENST00000378726 FAM213BQ8TBF2 198 aa16.22■□□□□ 0.19
SSU72-204ENST00000378726 PLPPR2Q96GM1 343 aa16.22■□□□□ 0.19
SSU72-204ENST00000378726 RNF7Q9UBF6 113 aa16.22■□□□□ 0.19
SSU72-204ENST00000378726 A0A1W2PPE2 198 aa16.22■□□□□ 0.19
SSU72-204ENST00000378726 GLIPR1P48060 266 aa16.22■□□□□ 0.19
SSU72-204ENST00000378726 RAB5CP51148 216 aa16.22■□□□□ 0.19
SSU72-204ENST00000378726 FAM201AQ5SY85 155 aa16.22■□□□□ 0.19
SSU72-204ENST00000378726 TPRX1Q8N7U7 411 aa16.22■□□□□ 0.19
SSU72-204ENST00000378726 RARRES2Q99969 163 aa16.22■□□□□ 0.19
SSU72-204ENST00000378726 SLC35B3Q9H1N7 401 aa16.22■□□□□ 0.19
SSU72-204ENST00000378726 MIOXQ9UGB7 285 aa16.22■□□□□ 0.19
SSU72-204ENST00000378726 FAM24AA6NFZ4 105 aa16.21■□□□□ 0.19
SSU72-204ENST00000378726 OOEPA6NGQ2 149 aa16.21■□□□□ 0.19
SSU72-204ENST00000378726 K7N7A8 449 aa16.21■□□□□ 0.19
SSU72-204ENST00000378726 CEACAM6P40199 344 aa16.21■□□□□ 0.19
SSU72-204ENST00000378726 SULT1A1P50225 295 aa16.21■□□□□ 0.19
SSU72-204ENST00000378726 RND3P61587 244 aa16.21■□□□□ 0.19
SSU72-204ENST00000378726 EWSR1Q01844 656 aaKnown RBP eCLIP16.21■□□□□ 0.19
SSU72-204ENST00000378726 CMTM1Q8IZ96 169 aa16.21■□□□□ 0.19
SSU72-204ENST00000378726 GPHA2Q96T91 129 aa16.21■□□□□ 0.19
SSU72-204ENST00000378726 KCNJ16Q9NPI9 418 aa16.21■□□□□ 0.19
SSU72-204ENST00000378726 COL6A6A6NMZ7 2263 aa16.21■□□□□ 0.19
SSU72-204ENST00000378726 SHISA9B4DS77 424 aa16.21■□□□□ 0.18
SSU72-204ENST00000378726 ZNF737O75373 536 aa16.21■□□□□ 0.18
SSU72-204ENST00000378726 GRNP28799 593 aaKnown RBP16.21■□□□□ 0.18
SSU72-204ENST00000378726 CCL8P80075 99 aa16.21■□□□□ 0.18
SSU72-204ENST00000378726 ZNF600Q6ZNG1 722 aa16.21■□□□□ 0.18
SSU72-204ENST00000378726 ZCCHC24Q8N2G6 241 aaKnown RBP16.21■□□□□ 0.18
SSU72-204ENST00000378726 GALMQ96C23 342 aa16.21■□□□□ 0.18
SSU72-204ENST00000378726 KIAA2026Q5HYC2 2103 aa16.2■□□□□ 0.18
SSU72-204ENST00000378726 SMG1Q96Q15 3661 aaKnown RBP16.2■□□□□ 0.18
SSU72-204ENST00000378726 NBEAQ8NFP9 2946 aa16.2■□□□□ 0.18
SSU72-204ENST00000378726 C17orf100A8MU93 164 aa16.2■□□□□ 0.18
SSU72-204ENST00000378726 C12orf77C9JDV5 145 aa16.2■□□□□ 0.18
SSU72-204ENST00000378726 CCL20P78556 96 aa16.2■□□□□ 0.18
SSU72-204ENST00000378726 TESK1Q15569 626 aa16.2■□□□□ 0.18
SSU72-204ENST00000378726 OR10V1Q8NGI7 309 aa16.2■□□□□ 0.18
SSU72-204ENST00000378726 OR1L1Q8NH94 360 aa16.2■□□□□ 0.18
SSU72-204ENST00000378726 MRGPRDQ8TDS7 321 aa16.2■□□□□ 0.18
SSU72-204ENST00000378726 DIRC2Q96SL1 478 aa16.2■□□□□ 0.18
SSU72-204ENST00000378726 ABHD14AQ9BUJ0 271 aa16.2■□□□□ 0.18
SSU72-204ENST00000378726 PBDC1Q9BVG4 233 aa16.2■□□□□ 0.18
SSU72-204ENST00000378726 PPP1R3CQ9UQK1 317 aa16.2■□□□□ 0.18
SSU72-204ENST00000378726 TMED3Q9Y3Q3 217 aa16.2■□□□□ 0.18
SSU72-204ENST00000378726 ITPR1Q14643 2758 aa16.2■□□□□ 0.18
SSU72-204ENST00000378726 E7EQL1 145 aa16.19■□□□□ 0.18
SSU72-204ENST00000378726 GPR37O15354 613 aa16.19■□□□□ 0.18
SSU72-204ENST00000378726 GATCO43716 136 aaKnown RBP16.19■□□□□ 0.18
SSU72-204ENST00000378726 CYB5R3P00387 301 aaPredicted RBP16.19■□□□□ 0.18
SSU72-204ENST00000378726 CLINT1Q14677 625 aa16.19■□□□□ 0.18
SSU72-204ENST00000378726 GNMTQ14749 295 aa16.19■□□□□ 0.18
SSU72-204ENST00000378726 CDSNQ15517 529 aa16.19■□□□□ 0.18
SSU72-204ENST00000378726 DMRTC2Q8IXT2 367 aaPredicted RBP16.19■□□□□ 0.18
SSU72-204ENST00000378726 CA5BP1Q8WTZ4 195 aa16.19■□□□□ 0.18
SSU72-204ENST00000378726 NEUROG1Q92886 237 aa16.19■□□□□ 0.18
SSU72-204ENST00000378726 SNX22Q96L94 193 aa16.19■□□□□ 0.18
SSU72-204ENST00000378726 C11orf1Q9H5F2 150 aa16.19■□□□□ 0.18
SSU72-204ENST00000378726 UBE2J1Q9Y385 318 aaPredicted RBP16.19■□□□□ 0.18
SSU72-204ENST00000378726 IGSF23A1L1A6 192 aa16.19■□□□□ 0.18
SSU72-204ENST00000378726 IGHV2-5P01817 119 aa16.19■□□□□ 0.18
SSU72-204ENST00000378726 OR2B8PP59922 312 aa16.19■□□□□ 0.18
SSU72-204ENST00000378726 RHEBQ15382 184 aa16.19■□□□□ 0.18
SSU72-204ENST00000378726 ZNRF1Q8ND25 227 aa16.19■□□□□ 0.18
SSU72-204ENST00000378726 PPP1R35Q8TAP8 253 aa16.19■□□□□ 0.18
SSU72-204ENST00000378726 RBM7Q9Y580 266 aaKnown RBP16.19■□□□□ 0.18
SSU72-204ENST00000378726 CACNA1DQ01668 2161 aa16.19■□□□□ 0.18
SSU72-204ENST00000378726 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.18■□□□□ 0.18
SSU72-204ENST00000378726 TNFSF12O43508 249 aa16.18■□□□□ 0.18
SSU72-204ENST00000378726 PGLYRP1O75594 196 aaPredicted RBP16.18■□□□□ 0.18
SSU72-204ENST00000378726 IGHV2-70P01814 119 aa16.18■□□□□ 0.18
SSU72-204ENST00000378726 HBZP02008 142 aa16.18■□□□□ 0.18
SSU72-204ENST00000378726 CD3EP07766 207 aa16.18■□□□□ 0.18
SSU72-204ENST00000378726 ADH4P08319 380 aa16.18■□□□□ 0.18
SSU72-204ENST00000378726 OR8U8P0C7N1 319 aa16.18■□□□□ 0.18
SSU72-204ENST00000378726 NQO2P16083 231 aa16.18■□□□□ 0.18
SSU72-204ENST00000378726 IL2RGP31785 369 aa16.18■□□□□ 0.18
SSU72-204ENST00000378726 TLE1Q04724 770 aa16.18■□□□□ 0.18
SSU72-204ENST00000378726 EDDM3AQ14507 147 aa16.18■□□□□ 0.18
SSU72-204ENST00000378726 OR2C3Q8N628 320 aa16.18■□□□□ 0.18
SSU72-204ENST00000378726 Q8TCH9 128 aa16.18■□□□□ 0.18
SSU72-204ENST00000378726 TMEM222Q9H0R3 208 aa16.18■□□□□ 0.18
SSU72-204ENST00000378726 TNFRSF1AP19438 455 aa16.18■□□□□ 0.18
SSU72-204ENST00000378726 TGIF2LYQ8IUE0 185 aa16.18■□□□□ 0.18
SSU72-204ENST00000378726 DEFB108BQ8NET1 73 aa16.18■□□□□ 0.18
SSU72-204ENST00000378726 OR13A1Q8NGR1 328 aa16.18■□□□□ 0.18
SSU72-204ENST00000378726 FAM222BQ8WU58 562 aa16.18■□□□□ 0.18
SSU72-204ENST00000378726 LURAP1Q96LR2 239 aa16.18■□□□□ 0.18
SSU72-204ENST00000378726 PUS1Q9Y606 427 aaKnown RBP eCLIP16.18■□□□□ 0.18
SSU72-204ENST00000378726 TMEM8BA6NDV4 472 aa16.17■□□□□ 0.18
SSU72-204ENST00000378726 MGST3O14880 152 aa16.17■□□□□ 0.18
SSU72-204ENST00000378726 CD55P08174 381 aa16.17■□□□□ 0.18
SSU72-204ENST00000378726 IRF2P14316 349 aa16.17■□□□□ 0.18
SSU72-204ENST00000378726 ATP6V0CP27449 155 aa16.17■□□□□ 0.18
SSU72-204ENST00000378726 S100GP29377 79 aa16.17■□□□□ 0.18
SSU72-204ENST00000378726 PAX5Q02548 391 aa16.17■□□□□ 0.18
SSU72-204ENST00000378726 OR2G3Q8NGZ4 309 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms