RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 IGSF23A1L1A6 192 aa12.94□□□□□ -0.34
NPHP4-201ENST00000378156 MUC1P15941 1255 aaPredicted RBP12.94□□□□□ -0.34
NPHP4-201ENST00000378156 TNXAQ16473 311 aa12.94□□□□□ -0.34
NPHP4-201ENST00000378156 UBTD1Q9HAC8 227 aa12.94□□□□□ -0.34
NPHP4-201ENST00000378156 CORTO00230 105 aa12.94□□□□□ -0.34
NPHP4-201ENST00000378156 GFRA3O60609 400 aa12.94□□□□□ -0.34
NPHP4-201ENST00000378156 BRS3P32247 399 aa12.94□□□□□ -0.34
NPHP4-201ENST00000378156 SERF2P84101 59 aa12.94□□□□□ -0.34
NPHP4-201ENST00000378156 PIPOXQ9P0Z9 390 aa12.94□□□□□ -0.34
NPHP4-201ENST00000378156 RFPL3SP0C7P2 107 aa12.94□□□□□ -0.34
NPHP4-201ENST00000378156 PRF1P14222 555 aa12.94□□□□□ -0.34
NPHP4-201ENST00000378156 CTSSP25774 331 aa12.94□□□□□ -0.34
NPHP4-201ENST00000378156 ATP6V0CP27449 155 aa12.94□□□□□ -0.34
NPHP4-201ENST00000378156 TMPRSS3P57727 454 aa12.94□□□□□ -0.34
NPHP4-201ENST00000378156 FDCSPQ8NFU4 85 aa12.94□□□□□ -0.34
NPHP4-201ENST00000378156 INTS1Q8N201 2190 aaKnown RBP12.94□□□□□ -0.34
NPHP4-201ENST00000378156 SNURFLB1AK76 121 aa12.94□□□□□ -0.34
NPHP4-201ENST00000378156 ISLRO14498 428 aa12.94□□□□□ -0.34
NPHP4-201ENST00000378156 MGST3O14880 152 aa12.94□□□□□ -0.34
NPHP4-201ENST00000378156 TCF21O43680 179 aa12.94□□□□□ -0.34
NPHP4-201ENST00000378156 UNC119Q13432 240 aa12.94□□□□□ -0.34
NPHP4-201ENST00000378156 TMEM116Q8NCL8 245 aa12.94□□□□□ -0.34
NPHP4-201ENST00000378156 RTN4RQ9BZR6 473 aa12.94□□□□□ -0.34
NPHP4-201ENST00000378156 INSIG2Q9Y5U4 225 aa12.94□□□□□ -0.34
NPHP4-201ENST00000378156 SPTAN1Q13813 2472 aaKnown RBP12.94□□□□□ -0.34
NPHP4-201ENST00000378156 DHRS7CA6NNS2 312 aa12.93□□□□□ -0.34
NPHP4-201ENST00000378156 DIRC3C9JPN6 131 aa12.93□□□□□ -0.34
NPHP4-201ENST00000378156 C1QL1O75973 258 aa12.93□□□□□ -0.34
NPHP4-201ENST00000378156 PPP1CCP36873 323 aaKnown RBP12.93□□□□□ -0.34
NPHP4-201ENST00000378156 TMEM50BP56557 158 aa12.93□□□□□ -0.34
NPHP4-201ENST00000378156 COL10A1Q03692 680 aa12.93□□□□□ -0.34
NPHP4-201ENST00000378156 TPRX1Q8N7U7 411 aa12.93□□□□□ -0.34
NPHP4-201ENST00000378156 VN1R17PQ8TDU5 208 aa12.93□□□□□ -0.34
NPHP4-201ENST00000378156 TIMP4Q99727 224 aa12.93□□□□□ -0.34
NPHP4-201ENST00000378156 TSC2P49815 1807 aa12.93□□□□□ -0.34
NPHP4-201ENST00000378156 PAGE4O60829 102 aa12.93□□□□□ -0.34
NPHP4-201ENST00000378156 SMPD2O60906 423 aa12.93□□□□□ -0.34
NPHP4-201ENST00000378156 CYB5R3P00387 301 aaPredicted RBP12.93□□□□□ -0.34
NPHP4-201ENST00000378156 OR4A8P0C604 315 aa12.93□□□□□ -0.34
NPHP4-201ENST00000378156 COX5BP10606 129 aa12.93□□□□□ -0.34
NPHP4-201ENST00000378156 BMI1P35226 326 aa12.93□□□□□ -0.34
NPHP4-201ENST00000378156 PITX3O75364 302 aa12.93□□□□□ -0.34
NPHP4-201ENST00000378156 MT-ND6P03923 174 aa12.93□□□□□ -0.34
NPHP4-201ENST00000378156 MRPL14Q6P1L8 145 aaKnown RBP12.93□□□□□ -0.34
NPHP4-201ENST00000378156 OR2V2Q96R30 315 aa12.93□□□□□ -0.34
NPHP4-201ENST00000378156 GDF9O60383 454 aa12.93□□□□□ -0.34
NPHP4-201ENST00000378156 BCL2P10415 239 aa12.93□□□□□ -0.34
NPHP4-201ENST00000378156 C10orf128Q5T292 105 aa12.93□□□□□ -0.34
NPHP4-201ENST00000378156 LILRB1Q8NHL6 650 aaPredicted RBP12.93□□□□□ -0.34
NPHP4-201ENST00000378156 IMMP1LQ96LU5 166 aa12.93□□□□□ -0.34
NPHP4-201ENST00000378156 TMEM204Q9BSN7 226 aa12.93□□□□□ -0.34
NPHP4-201ENST00000378156 HELTA6NFD8 242 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 P01737 135 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 TMEM105Q8N8V8 129 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 TP53RKQ96S44 253 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 WNT5BQ9H1J7 359 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 WASHC3Q9Y3C0 194 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 CXorf1O96002 111 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 ORM1P02763 201 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 MMP9P14780 707 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 TCL1AP56279 114 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 HERVK_113P61574 105 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 STXBP6Q8NFX7 210 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 FLYWCH2Q96CP2 140 aaKnown RBP12.92□□□□□ -0.34
NPHP4-201ENST00000378156 SIGLEC12Q96PQ1 595 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 DIRC2Q96SL1 478 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 TXNDC17Q9BRA2 123 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 PRDM14Q9GZV8 571 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 SLC25A10Q9UBX3 287 aaPredicted RBP12.92□□□□□ -0.34
NPHP4-201ENST00000378156 MYLKQ15746 1914 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 IGLV3-12A0A075B6K2 115 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 SYNGR1O43759 233 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 CLDN14O95500 239 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 PSG2P11465 335 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 SRP14P37108 136 aaKnown RBP12.92□□□□□ -0.34
NPHP4-201ENST00000378156 PSG5Q15238 335 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 WDFY1Q8IWB7 410 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 HARBI1Q96MB7 349 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 GPHA2Q96T91 129 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 HIST1H1EP10412 219 aaKnown RBP12.92□□□□□ -0.34
NPHP4-201ENST00000378156 RPL7P18124 248 aaKnown RBP12.92□□□□□ -0.34
NPHP4-201ENST00000378156 IER3P46695 156 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 OR52L2PQ8NGH6 319 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 C1RLQ9NZP8 487 aa12.92□□□□□ -0.34
NPHP4-201ENST00000378156 IFITM10A6NMD0 228 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 APCSP02743 223 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 CSN3P07498 182 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 ZNF826PQ6ZT77 177 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 C5orf17Q8NAS9 161 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 PRNDQ9UKY0 176 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 FAM90A10PA6NDY2 464 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 FAM90A18PA6NE21 464 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 FAM90A16PA6NEW6 464 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 C5orf52A6NGY3 159 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 FAM90A20PA6NIJ5 464 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 FAM90A8PA6NJQ4 464 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 FAM90A7PA6NKC0 464 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 FAM90A22PA8MWA6 464 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 FAM90A12PA8MX19 464 aa12.91□□□□□ -0.34
NPHP4-201ENST00000378156 FAM90A5PA8MXJ8 464 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms