RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 MOSP00540 346 aa10.59□□□□□ -0.71
CKAP2-202ENST00000378034 OR5H8P0DN80 308 aa10.59□□□□□ -0.71
CKAP2-202ENST00000378034 NFYAP23511 347 aaPredicted RBP10.59□□□□□ -0.71
CKAP2-202ENST00000378034 MC5RP33032 325 aa10.59□□□□□ -0.71
CKAP2-202ENST00000378034 LUMP51884 338 aaPredicted RBP10.59□□□□□ -0.71
CKAP2-202ENST00000378034 RPL39P5Q59GN2 51 aa10.59□□□□□ -0.71
CKAP2-202ENST00000378034 OR8H1Q8NGG4 311 aa10.59□□□□□ -0.71
CKAP2-202ENST00000378034 EAF1Q96JC9 268 aaPredicted RBP10.59□□□□□ -0.71
CKAP2-202ENST00000378034 ABHD1Q96SE0 405 aa10.59□□□□□ -0.71
CKAP2-202ENST00000378034 OR2D2Q9H210 308 aa10.59□□□□□ -0.71
CKAP2-202ENST00000378034 MOB4Q9Y3A3 225 aa10.59□□□□□ -0.71
CKAP2-202ENST00000378034 CLPSL1A2RUU4 121 aa10.58□□□□□ -0.72
CKAP2-202ENST00000378034 OR5H14A6NHG9 310 aa10.58□□□□□ -0.72
CKAP2-202ENST00000378034 CTDSPLO15194 276 aa10.58□□□□□ -0.72
CKAP2-202ENST00000378034 FGF16O43320 207 aa10.58□□□□□ -0.72
CKAP2-202ENST00000378034 S100A5P33763 92 aa10.58□□□□□ -0.72
CKAP2-202ENST00000378034 ACTBP60709 375 aa10.58□□□□□ -0.72
CKAP2-202ENST00000378034 AWAT1Q58HT5 328 aa10.58□□□□□ -0.72
CKAP2-202ENST00000378034 OVCH2Q7RTZ1 564 aa10.58□□□□□ -0.72
CKAP2-202ENST00000378034 Q8N6K4 173 aa10.58□□□□□ -0.72
CKAP2-202ENST00000378034 GIMAP1Q8WWP7 306 aa10.58□□□□□ -0.72
CKAP2-202ENST00000378034 FCAMRQ8WWV6 532 aa10.58□□□□□ -0.72
CKAP2-202ENST00000378034 PRSS22Q9GZN4 317 aa10.58□□□□□ -0.72
CKAP2-202ENST00000378034 IGHV3-72A0A0B4J1Y9 119 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 GABARAPH6UMI1 98 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 PROP1O75360 226 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 RBBP9O75884 186 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 CT45A6P0DMU7 189 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 CT45A5P0DMU8 189 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 CT45A7P0DMV0 189 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 FCGR2CP31995 323 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 TNFSF8P32971 234 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 TAGLNQ01995 201 aaKnown RBP10.57□□□□□ -0.72
CKAP2-202ENST00000378034 SSBP1Q04837 148 aaKnown RBP10.57□□□□□ -0.72
CKAP2-202ENST00000378034 ACTBL2Q562R1 376 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 C11orf88Q6PI97 169 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 C12orf54Q6X4T0 127 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 LYSMD2Q8IV50 215 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 Q8N2B8 174 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 OR5AN1Q8NGI8 311 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 OR5H2Q8NGV7 314 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 SDHAF2Q9NX18 166 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 MTFP1Q9UDX5 166 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 ZNF736B4DX44 427 aaPredicted RBP10.57□□□□□ -0.72
CKAP2-202ENST00000378034 FCER2P06734 321 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 DYRK1AQ13627 763 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 IL18Q14116 193 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 MSMO1Q15800 293 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 DHRS11Q6UWP2 260 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 ZNF645Q8N7E2 425 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 OR52I2Q8NH67 350 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 OR2T6Q8NHC8 308 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 LINC01006Q8NI28 216 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 ADTRPQ96IZ2 230 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 EHFQ9NZC4 300 aa10.57□□□□□ -0.72
CKAP2-202ENST00000378034 ZNF107Q9UII5 783 aaPredicted RBP10.57□□□□□ -0.72
CKAP2-202ENST00000378034 M0R1X1 148 aa10.56□□□□□ -0.72
CKAP2-202ENST00000378034 PPYP01298 95 aa10.56□□□□□ -0.72
CKAP2-202ENST00000378034 TBPP20226 339 aa10.56□□□□□ -0.72
CKAP2-202ENST00000378034 MDKP21741 143 aaPredicted RBP10.56□□□□□ -0.72
CKAP2-202ENST00000378034 HNF4GQ14541 408 aa10.56□□□□□ -0.72
CKAP2-202ENST00000378034 FBLN7Q53RD9 439 aa10.56□□□□□ -0.72
CKAP2-202ENST00000378034 FOXB2Q5VYV0 432 aa10.56□□□□□ -0.72
CKAP2-202ENST00000378034 RNF5Q99942 180 aa10.56□□□□□ -0.72
CKAP2-202ENST00000378034 SOSTQ9BQB4 213 aa10.56□□□□□ -0.72
CKAP2-202ENST00000378034 WASHC3Q9Y3C0 194 aa10.56□□□□□ -0.72
CKAP2-202ENST00000378034 FABP12A6NFH5 140 aa10.56□□□□□ -0.72
CKAP2-202ENST00000378034 H0YJW9 148 aa10.56□□□□□ -0.72
CKAP2-202ENST00000378034 PMP2P02689 132 aa10.56□□□□□ -0.72
CKAP2-202ENST00000378034 AADACP22760 399 aa10.56□□□□□ -0.72
CKAP2-202ENST00000378034 PTBP1P26599 531 aaKnown RBP eCLIP10.56□□□□□ -0.72
CKAP2-202ENST00000378034 HLA-DMAP28067 261 aa10.56□□□□□ -0.72
CKAP2-202ENST00000378034 THBS3P49746 956 aa10.56□□□□□ -0.72
CKAP2-202ENST00000378034 SMIM4Q8WVI0 70 aa10.56□□□□□ -0.72
CKAP2-202ENST00000378034 TAF15Q92804 592 aaKnown RBP eCLIP10.56□□□□□ -0.72
CKAP2-202ENST00000378034 ZNF702PQ9H963 129 aa10.56□□□□□ -0.72
CKAP2-202ENST00000378034 KLK11Q9UBX7 282 aa10.56□□□□□ -0.72
CKAP2-202ENST00000378034 RNF114Q9Y508 228 aa10.56□□□□□ -0.72
CKAP2-202ENST00000378034 APOA2P02652 100 aa10.55□□□□□ -0.72
CKAP2-202ENST00000378034 HRH1P35367 487 aa10.55□□□□□ -0.72
CKAP2-202ENST00000378034 RFX2P48378 723 aa10.55□□□□□ -0.72
CKAP2-202ENST00000378034 BLCAPP62952 87 aa10.55□□□□□ -0.72
CKAP2-202ENST00000378034 VAX1Q5SQQ9 334 aa10.55□□□□□ -0.72
CKAP2-202ENST00000378034 ZNF660Q6AZW8 331 aaPredicted RBP10.55□□□□□ -0.72
CKAP2-202ENST00000378034 FAM131AQ6UXB0 335 aa10.55□□□□□ -0.72
CKAP2-202ENST00000378034 PDPNQ86YL7 162 aa10.55□□□□□ -0.72
CKAP2-202ENST00000378034 C5orf56Q8N8D9 126 aa10.55□□□□□ -0.72
CKAP2-202ENST00000378034 ZNF383Q8NA42 475 aa10.55□□□□□ -0.72
CKAP2-202ENST00000378034 ZBTB34Q8NCN2 500 aa10.55□□□□□ -0.72
CKAP2-202ENST00000378034 OR6F1Q8NGZ6 308 aa10.55□□□□□ -0.72
CKAP2-202ENST00000378034 BORCS5Q969J3 196 aa10.55□□□□□ -0.72
CKAP2-202ENST00000378034 IGKV1D-13A0A0B4J2D9 117 aa10.54□□□□□ -0.72
CKAP2-202ENST00000378034 NCBP2LA6PVI3 153 aaKnown RBP10.54□□□□□ -0.72
CKAP2-202ENST00000378034 GSTZ1O43708 216 aaPredicted RBP10.54□□□□□ -0.72
CKAP2-202ENST00000378034 AMY1AP04745 511 aa10.54□□□□□ -0.72
CKAP2-202ENST00000378034 AMY2AP04746 511 aa10.54□□□□□ -0.72
CKAP2-202ENST00000378034 IGKV1-13P0DP09 117 aa10.54□□□□□ -0.72
CKAP2-202ENST00000378034 RRASP10301 218 aa10.54□□□□□ -0.72
CKAP2-202ENST00000378034 HERV-K104P61576 105 aa10.54□□□□□ -0.72
CKAP2-202ENST00000378034 DGCR2P98153 550 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms